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Cow genome map

           
Conread name:
           
Emb1-C0005181_A14
        

               
Conread position:
               
144-448
               

               
Cow position:
               
chr27:6159753-6160062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
144-451
               

               
Cow position:
               
chr27:25998474-25998783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
144-475
               

               
Cow position:
               
chr27:23929725-23930079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 220
               

               
Conread position:
               
151-458
               

               
Cow position:
               
chr27:30365090-30365402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 202
               

               
Conread position:
               
155-350
               

               
Cow position:
               
chr27:22245400-22245609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 43
               

               
Conread position:
               
155-438
               

               
Cow position:
               
chr27:22225810-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
67, 140
               

               
Conread position:
               
155-466
               

               
Cow position:
               
chr27:15319243-15319543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
155-471
               

               
Cow position:
               
chr27:1637168-1636842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 203
               

               
Conread position:
               
158-420
               

               
Cow position:
               
chr27:2847635-2847902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
61, 189
               

               
Conread position:
               
158-461
               

               
Cow position:
               
chr27:14937648-14937333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
163-401
               

               
Cow position:
               
chr27:30829448-30829676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
163-441
               

               
Cow position:
               
chr27:19083931-19083645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 149
               

               
Conread position:
               
163-451
               

               
Cow position:
               
chr27:3306553-3306854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 152
               

               
Conread position:
               
163-452
               

               
Cow position:
               
chr27:29504863-29504564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
87, 187
               

               
Conread position:
               
163-454
               

               
Cow position:
               
chr27:6453994-6454296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 189
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr27:13005635-13005928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
163-463
               

               
Cow position:
               
chr27:28002036-28001716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 193
               

               
Conread position:
               
163-465
               

               
Cow position:
               
chr27:8430653-8430347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
163-465
               

               
Cow position:
               
chr27:26441262-26440965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 138
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr27:4858852-4858550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
56, 183
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr27:8353262-8353569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr27:8962474-8962166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr27:19544134-19543809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr27:12191697-12191388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
16, 174
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr27:15409258-15408942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
56, 206
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr27:20553528-20553827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 168
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr27:20749235-20748904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
163-477
               

               
Cow position:
               
chr27:27050119-27049799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
164-461
               

               
Cow position:
               
chr27:24509612-24509908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 177
               

               
Conread position:
               
164-465
               

               
Cow position:
               
chr27:20766166-20765866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
164-465
               

               
Cow position:
               
chr27:22330890-22330573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
164-465
               

               
Cow position:
               
chr27:26299633-26299932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr27:10992142-10992450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
164-470
               

               
Cow position:
               
chr27:8048944-8048640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
164-473
               

               
Cow position:
               
chr27:21393725-21393396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
59, 188
               

               
Conread position:
               
165-453
               

               
Cow position:
               
chr27:29516039-29515772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
272, 42
               

               
Conread position:
               
165-465
               

               
Cow position:
               
chr27:27053093-27053388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
165-466
               

               
Cow position:
               
chr27:20037330-20037030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
48, 184
               

               
Conread position:
               
165-474
               

               
Cow position:
               
chr27:24225108-24224798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
166-475
               

               
Cow position:
               
chr27:26161293-26161606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
167-465
               

               
Cow position:
               
chr27:12244336-12244038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 178
               

               
Conread position:
               
183-477
               

               
Cow position:
               
chr27:26218508-26218814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
187-416
               

               
Cow position:
               
chr27:16455560-16455318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
187-454
               

               
Cow position:
               
chr27:18593084-18593352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 126
               

               
Conread position:
               
192-420
               

               
Cow position:
               
chr27:13977731-13977491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
192-471
               

               
Cow position:
               
chr27:13251841-13252107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
192-471
               

               
Cow position:
               
chr27:23128282-23128561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
200-413
               

               
Cow position:
               
chr27:29593798-29593585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
200-466
               

               
Cow position:
               
chr27:22035544-22035281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 160
               

               
Conread position:
               
208-466
               

               
Cow position:
               
chr27:1122872-1123127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 101
               

               
Conread position:
               
209-477
               

               
Cow position:
               
chr27:19685871-19685604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
103, 139
               

               
Conread position:
               
210-431
               

               
Cow position:
               
chr27:28260692-28260477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
99, 87
               

               
Conread position:
               
212-471
               

               
Cow position:
               
chr27:7731410-7731147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
212-476
               

               
Cow position:
               
chr27:19660777-19661049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
97, 124
               

               
Conread position:
               
213-409
               

               
Cow position:
               
chr27:20812751-20812950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
213-412
               

               
Cow position:
               
chr27:17918467-17918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr27:23860012-23860218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-435
               

               
Cow position:
               
chr27:7974023-7974240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
213-435
               

               
Cow position:
               
chr27:20514669-20514887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
213-435
               

               
Cow position:
               
chr27:26112069-26111843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
96, 128
               

               
Conread position:
               
213-441
               

               
Cow position:
               
chr27:16965423-16965645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr27:10653531-10653756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr27:16088651-16088883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
213-451
               

               
Cow position:
               
chr27:15378627-15378396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
213-461
               

               
Cow position:
               
chr27:26413408-26413162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-461
               

               
Cow position:
               
chr27:30914856-30915097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr27:24331567-24331819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
104, 126
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr27:536311-536554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr27:4386215-4385967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr27:8263492-8263239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr27:12246500-12246752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr27:16705097-16705342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr27:2592388-2592645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr27:2957259-2957497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr27:4390411-4390161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr27:7935311-7935059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
68, 128
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr27:12516040-12516291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr27:13875582-13875827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr27:19546665-19546410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr27:27641164-27640899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
213-469
               

               
Cow position:
               
chr27:25276989-25277240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr27:1353429-1353691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr27:11480790-11480528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr27:17397608-17397349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 134
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr27:23554480-23554223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr27:24477263-24477514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
96, 117
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr27:26226443-26226189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr27:26581590-26581334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr27:30872210-30871958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-474
               

               
Cow position:
               
chr27:29380701-29380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr27:6550310-6550561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr27:10307451-10307193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr27:12278409-12278162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr27:13411522-13411248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr27:16103658-16103914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr27:30988644-30988904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr27:426816-427077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr27:6541478-6541737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr27:12596623-12596873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
211, 95
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr27:28518142-28518400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
98, 129
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr27:22454929-22454684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
6, 124
               

               
Conread position:
               
214-466
               

               
Cow position:
               
chr27:22171147-22171396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
215-450
               

               
Cow position:
               
chr27:27038989-27038758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
215-453
               

               
Cow position:
               
chr27:28190353-28190133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
215-467
               

               
Cow position:
               
chr27:22559975-22559724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
209, 96
               

               
Conread position:
               
215-471
               

               
Cow position:
               
chr27:24371081-24371336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
215-471
               

               
Cow position:
               
chr27:30359255-30359505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
216-466
               

               
Cow position:
               
chr27:28922043-28921802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
218-450
               

               
Cow position:
               
chr27:24738950-24738710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
6, 132
               

               
Conread position:
               
218-454
               

               
Cow position:
               
chr27:31148611-31148846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
6, 115
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr27:23510834-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
218-471
               

               
Cow position:
               
chr27:23483079-23483325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
219-439
               

               
Cow position:
               
chr27:31017972-31017764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
201, 9
               

               
Conread position:
               
219-466
               

               
Cow position:
               
chr27:22418913-22418672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
219-471
               

               
Cow position:
               
chr27:4813032-4812779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 91
               

               
Conread position:
               
219-471
               

               
Cow position:
               
chr27:8630017-8629772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
219-471
               

               
Cow position:
               
chr27:30261039-30260791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
221-419
               

               
Cow position:
               
chr27:23877000-23876792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
221-423
               

               
Cow position:
               
chr27:23108045-23107848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr27:15215083-15215307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
221-454
               

               
Cow position:
               
chr27:17472657-17472898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
221-455
               

               
Cow position:
               
chr27:15865463-15865692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
221-456
               

               
Cow position:
               
chr27:27389168-27388936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-464
               

               
Cow position:
               
chr27:23882512-23882283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr27:4672867-4673114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr27:15643030-15643267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr27:20354446-20354679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr27:23632455-23632693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr27:19387874-19388110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr27:19589328-19589567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr27:19717770-19718018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr27:24014884-24014644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr27:28931946-28931695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr27:1768768-1768526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr27:17995087-17994841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr27:20283491-20283743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr27:20497061-20497315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr27:22220409-22220651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr27:27020242-27020001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr27:29831843-29831580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 113
               

               
Conread position:
               
222-466
               

               
Cow position:
               
chr27:30764881-30765134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
28, 136
               

               
Conread position:
               
222-475
               

               
Cow position:
               
chr27:27694913-27694662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
225-469
               

               
Cow position:
               
chr27:23735816-23736061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
228-409
               

               
Cow position:
               
chr27:17646307-17646128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
228-465
               

               
Cow position:
               
chr27:1058814-1058588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
209, 19
               

               
Conread position:
               
228-466
               

               
Cow position:
               
chr27:19648081-19647843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 108
               

               
Conread position:
               
228-471
               

               
Cow position:
               
chr27:22386736-22386971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
228-471
               

               
Cow position:
               
chr27:28245664-28245902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 113
               

               
Conread position:
               
229-459
               

               
Cow position:
               
chr27:13318112-13317869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 240
               

               
Conread position:
               
229-471
               

               
Cow position:
               
chr27:11416316-11416550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
230-471
               

               
Cow position:
               
chr27:28271287-28271045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 89
               

               
Conread position:
               
234-439
               

               
Cow position:
               
chr27:4155863-4156072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 125
               

               
Conread position:
               
236-465
               

               
Cow position:
               
chr27:15925215-15925439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
73, 96
               

               
Conread position:
               
237-471
               

               
Cow position:
               
chr27:8168560-8168328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
238-431
               

               
Cow position:
               
chr27:8062479-8062292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
238-452
               

               
Cow position:
               
chr27:26490037-26489822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
238-454
               

               
Cow position:
               
chr27:15867261-15867483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr27:26807694-26807467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
238-467
               

               
Cow position:
               
chr27:30868869-30868645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr27:715372-715604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr27:26428261-26428031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 94
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr27:26509282-26509059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr27:27136649-27136418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
238-475
               

               
Cow position:
               
chr27:27270671-27270432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
239-465
               

               
Cow position:
               
chr27:26920039-26919807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 178
               

               
Conread position:
               
239-466
               

               
Cow position:
               
chr27:17331371-17331595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr27:10979735-10979961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr27:15866091-15866325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr27:30672686-30672462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
75, 98
               

               
Conread position:
               
240-447
               

               
Cow position:
               
chr27:6924958-6925167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
240-469
               

               
Cow position:
               
chr27:18558234-18558459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
240-471
               

               
Cow position:
               
chr27:27844129-27843895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
242-471
               

               
Cow position:
               
chr27:11435447-11435220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 90
               

               
Conread position:
               
243-477
               

               
Cow position:
               
chr27:16625776-16626009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
243-477
               

               
Cow position:
               
chr27:30354468-30354235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 97
               

               
Conread position:
               
247-466
               

               
Cow position:
               
chr27:23890818-23891037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
247-471
               

               
Cow position:
               
chr27:6499941-6500162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
247-475
               

               
Cow position:
               
chr27:8942809-8942573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 110
               

               
Conread position:
               
248-455
               

               
Cow position:
               
chr27:21975934-21976135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
248-475
               

               
Cow position:
               
chr27:18543868-18544104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
250-454
               

               
Cow position:
               
chr27:13841252-13841458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 88
               

               
Conread position:
               
250-460
               

               
Cow position:
               
chr27:26135030-26135228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
174, 43
               

               
Conread position:
               
250-470
               

               
Cow position:
               
chr27:18739260-18739488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr27:815245-815467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr27:19577559-19577776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
250-475
               

               
Cow position:
               
chr27:706836-707061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
250-475
               

               
Cow position:
               
chr27:20247921-20247700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
174, 84
               

               
Conread position:
               
252-466
               

               
Cow position:
               
chr27:25379873-25380089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
252-471
               

               
Cow position:
               
chr27:12429292-12429504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
252-475
               

               
Cow position:
               
chr27:9169755-9169534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
255-466
               

               
Cow position:
               
chr27:28018226-28018429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
255-475
               

               
Cow position:
               
chr27:9090902-9090695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
169, 49
               

               
Conread position:
               
255-477
               

               
Cow position:
               
chr27:30362142-30362352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
256-470
               

               
Cow position:
               
chr27:21351132-21350919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
260-471
               

               
Cow position:
               
chr27:24999847-24999637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
264-463
               

               
Cow position:
               
chr27:20056071-20055876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
280-477
               

               
Cow position:
               
chr27:732488-732680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
297-474
               

               
Cow position:
               
chr27:7538147-7537967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
298-471
               

               
Cow position:
               
chr27:6350909-6350728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
305-466
               

               
Cow position:
               
chr27:1183943-1183781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
309-471
               

               
Cow position:
               
chr27:4011622-4011780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
309-471
               

               
Cow position:
               
chr27:22268444-22268602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
310-466
               

               
Cow position:
               
chr27:20570064-20570218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr27:14902707-14902551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr27:29283462-29283307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
310-475
               

               
Cow position:
               
chr27:29236524-29236686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
310-477
               

               
Cow position:
               
chr27:26398312-26398150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
159, 27
               

               
Conread position:
               
315-471
               

               
Cow position:
               
chr27:10395308-10395157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
319-466
               

               
Cow position:
               
chr27:25790759-25790900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
348-475
               

               
Cow position:
               
chr27:27550764-27550637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 92
               

               
Conread position:
               
354-466
               

               
Cow position:
               
chr27:27003290-27003180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
364-477
               

               
Cow position:
               
chr27:29399809-29399925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 93
               
Show alignments to all cow chromosomes.