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Cow genome map

           
Conread name:
           
Emb1-C0005181_A14
        

               
Conread position:
               
155-368
               

               
Cow position:
               
chr28:9294309-9294532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 198
               

               
Conread position:
               
155-418
               

               
Cow position:
               
chr28:19253661-19253394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
155-434
               

               
Cow position:
               
chr28:26372923-26372628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 162
               

               
Conread position:
               
155-461
               

               
Cow position:
               
chr28:15081738-15082055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
65, 188
               

               
Conread position:
               
155-465
               

               
Cow position:
               
chr28:21570359-21570054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
155-475
               

               
Cow position:
               
chr28:23676316-23675992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 187
               

               
Conread position:
               
155-476
               

               
Cow position:
               
chr28:17601691-17602018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 193
               

               
Conread position:
               
158-461
               

               
Cow position:
               
chr28:25564263-25563951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
162-437
               

               
Cow position:
               
chr28:9237490-9237207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
66, 178
               

               
Conread position:
               
163-401
               

               
Cow position:
               
chr28:31165807-31166055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 189
               

               
Conread position:
               
163-420
               

               
Cow position:
               
chr28:7539983-7540248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 55
               

               
Conread position:
               
163-443
               

               
Cow position:
               
chr28:5827125-5826838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 98
               

               
Conread position:
               
163-447
               

               
Cow position:
               
chr28:10588839-10589136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 196
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr28:24343547-24343241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
56, 158
               

               
Conread position:
               
163-464
               

               
Cow position:
               
chr28:6643105-6643409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 189
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr28:33284934-33285247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 190
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr28:7865499-7865185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr28:18934629-18934316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr28:5474857-5475178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr28:26719524-26719208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
163-477
               

               
Cow position:
               
chr28:24996424-24996734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
164-332
               

               
Cow position:
               
chr28:2762365-2762188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
164-465
               

               
Cow position:
               
chr28:20963354-20963662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
55, 188
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr28:616562-616250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 191
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr28:13176532-13176809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
184, 47
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr28:32366011-32365712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
164-471
               

               
Cow position:
               
chr28:14508194-14508510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 195
               

               
Conread position:
               
164-471
               

               
Cow position:
               
chr28:22571491-22571804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
165-454
               

               
Cow position:
               
chr28:3914897-3914587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 190
               

               
Conread position:
               
165-475
               

               
Cow position:
               
chr28:9176586-9176898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
165-475
               

               
Cow position:
               
chr28:13866015-13865696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
166-391
               

               
Cow position:
               
chr28:7805254-7805484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
169-421
               

               
Cow position:
               
chr28:32370702-32370966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
170-408
               

               
Cow position:
               
chr28:7157003-7156764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
183-461
               

               
Cow position:
               
chr28:32844778-32845063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 113
               

               
Conread position:
               
187-477
               

               
Cow position:
               
chr28:23668629-23668936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 164
               

               
Conread position:
               
192-466
               

               
Cow position:
               
chr28:23724325-23724589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
204-466
               

               
Cow position:
               
chr28:25596752-25596498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
213-391
               

               
Cow position:
               
chr28:20397255-20397430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr28:11559517-11559721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
94, 121
               

               
Conread position:
               
213-420
               

               
Cow position:
               
chr28:25677226-25677435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
92, 127
               

               
Conread position:
               
213-431
               

               
Cow position:
               
chr28:19222036-19222250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 116
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr28:3011155-3011385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr28:4881125-4881349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr28:5166882-5166654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr28:7372007-7372233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
88, 96
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr28:27161212-27161440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
213-448
               

               
Cow position:
               
chr28:10053210-10053450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 103
               

               
Conread position:
               
213-451
               

               
Cow position:
               
chr28:21355346-21355104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr28:8140597-8140359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
213-457
               

               
Cow position:
               
chr28:32174744-32174505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr28:7008863-7009107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
96, 129
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr28:3746317-3746072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
211, 113
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr28:3143763-3144026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr28:5144406-5144656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr28:19025890-19026146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr28:19262472-19262723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 125
               

               
Conread position:
               
213-467
               

               
Cow position:
               
chr28:662223-661975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
213-467
               

               
Cow position:
               
chr28:34230343-34230095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr28:1632542-1632794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr28:3492669-3492924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 95
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr28:7697867-7698120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr28:9636342-9636592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 133
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr28:11426428-11426681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr28:11884406-11884659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr28:22321534-22321286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr28:26743741-26743479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
213-473
               

               
Cow position:
               
chr28:11346372-11346627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr28:2752379-2752645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 130
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr28:5204310-5204051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 133
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr28:5817957-5817698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr28:26922253-26922513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr28:30326976-30327239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr28:31649188-31648925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
124, 22
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr28:6059355-6059615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 108
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr28:24966502-24966246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 134
               

               
Conread position:
               
215-471
               

               
Cow position:
               
chr28:15043749-15044000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
215-471
               

               
Cow position:
               
chr28:20313390-20313133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr28:17398122-17398335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
93, 120
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr28:17414363-17414576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
93, 120
               

               
Conread position:
               
216-465
               

               
Cow position:
               
chr28:4763990-4763741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
216-475
               

               
Cow position:
               
chr28:4307786-4308054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
217-471
               

               
Cow position:
               
chr28:4016644-4016399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
7, 122
               

               
Conread position:
               
217-471
               

               
Cow position:
               
chr28:7228280-7228522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
218-397
               

               
Cow position:
               
chr28:4823714-4823541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 122
               

               
Conread position:
               
218-441
               

               
Cow position:
               
chr28:19564118-19564338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 122
               

               
Conread position:
               
218-452
               

               
Cow position:
               
chr28:11079413-11079185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
218-471
               

               
Cow position:
               
chr28:20124895-20124644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 123
               

               
Conread position:
               
218-477
               

               
Cow position:
               
chr28:33052148-33051882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
219-416
               

               
Cow position:
               
chr28:30865525-30865335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
219-419
               

               
Cow position:
               
chr28:8147756-8147949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
219-465
               

               
Cow position:
               
chr28:31109896-31110139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
219-466
               

               
Cow position:
               
chr28:14512641-14512388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
219-466
               

               
Cow position:
               
chr28:23007622-23007868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
219-471
               

               
Cow position:
               
chr28:25249462-25249215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
220-475
               

               
Cow position:
               
chr28:26103807-26103567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
221-402
               

               
Cow position:
               
chr28:17012191-17012362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
221-411
               

               
Cow position:
               
chr28:28765797-28765984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
221-424
               

               
Cow position:
               
chr28:4045950-4045760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr28:13608003-13607754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr28:23530980-23530735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr28:4834739-4834976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 6
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr28:5436972-5437222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr28:8347837-8347596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr28:8408841-8408600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr28:10999562-10999807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 196
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr28:18759938-18760181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr28:21598145-21598388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr28:22346127-22345885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr28:25806680-25806437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr28:4159061-4158819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr28:6971242-6971483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr28:9285260-9285513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr28:21868563-21868316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
221-473
               

               
Cow position:
               
chr28:13474406-13474156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr28:10529384-10529629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr28:23410217-23410474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr28:24082376-24082122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
222-471
               

               
Cow position:
               
chr28:11786612-11786852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
223-475
               

               
Cow position:
               
chr28:9100041-9099791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
228-446
               

               
Cow position:
               
chr28:25128986-25128768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
228-466
               

               
Cow position:
               
chr28:8022003-8022243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
228-466
               

               
Cow position:
               
chr28:18186656-18186420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 106
               

               
Conread position:
               
229-466
               

               
Cow position:
               
chr28:4841291-4841526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 128
               

               
Conread position:
               
229-472
               

               
Cow position:
               
chr28:13693847-13693610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
229-475
               

               
Cow position:
               
chr28:8787638-8787396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
230-466
               

               
Cow position:
               
chr28:4282393-4282624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
230-466
               

               
Cow position:
               
chr28:5236506-5236733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
237-443
               

               
Cow position:
               
chr28:21103737-21103948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
237-459
               

               
Cow position:
               
chr28:25727463-25727249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 70
               

               
Conread position:
               
237-471
               

               
Cow position:
               
chr28:4643679-4643902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 95
               

               
Conread position:
               
237-471
               

               
Cow position:
               
chr28:27218413-27218185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
237-475
               

               
Cow position:
               
chr28:3023822-3024060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
238-435
               

               
Cow position:
               
chr28:5792798-5792602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
238-459
               

               
Cow position:
               
chr28:11866575-11866792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
238-464
               

               
Cow position:
               
chr28:23621627-23621415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
238-465
               

               
Cow position:
               
chr28:21380972-21380745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
6, 110
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr28:3449393-3449165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr28:21363830-21363612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr28:4884163-4884402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 176
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr28:25283284-25283068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
201, 51
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr28:26982648-26982882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
238-472
               

               
Cow position:
               
chr28:34877890-34878112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
186, 49
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr28:25728284-25728053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
239-465
               

               
Cow position:
               
chr28:5931441-5931219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
239-466
               

               
Cow position:
               
chr28:9426261-9426486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr28:16110026-16109802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
240-475
               

               
Cow position:
               
chr28:11817878-11818105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
5, 98
               

               
Conread position:
               
241-471
               

               
Cow position:
               
chr28:4536546-4536317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
242-461
               

               
Cow position:
               
chr28:12430691-12430478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
243-465
               

               
Cow position:
               
chr28:2960745-2960965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
243-471
               

               
Cow position:
               
chr28:11752054-11752280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
243-475
               

               
Cow position:
               
chr28:5128643-5128874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
247-410
               

               
Cow position:
               
chr28:3160872-3161032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
247-446
               

               
Cow position:
               
chr28:10606553-10606743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
247-466
               

               
Cow position:
               
chr28:2862949-2862731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
247-471
               

               
Cow position:
               
chr28:26685198-26684977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
247-471
               

               
Cow position:
               
chr28:30746649-30746867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
247-475
               

               
Cow position:
               
chr28:17235655-17235875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
248-443
               

               
Cow position:
               
chr28:15263638-15263829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
248-460
               

               
Cow position:
               
chr28:27313652-27313873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
250-460
               

               
Cow position:
               
chr28:10745292-10745081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
250-460
               

               
Cow position:
               
chr28:18625312-18625097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
250-477
               

               
Cow position:
               
chr28:18354255-18354470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
251-466
               

               
Cow position:
               
chr28:34430346-34430557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
252-477
               

               
Cow position:
               
chr28:24672341-24672119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 81
               

               
Conread position:
               
253-471
               

               
Cow position:
               
chr28:21502467-21502255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
254-465
               

               
Cow position:
               
chr28:15577188-15577394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
163, 53
               

               
Conread position:
               
254-470
               

               
Cow position:
               
chr28:2814435-2814638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
255-442
               

               
Cow position:
               
chr28:3726957-3726772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
255-454
               

               
Cow position:
               
chr28:5193401-5193196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
257-461
               

               
Cow position:
               
chr28:30809560-30809358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 81
               

               
Conread position:
               
257-465
               

               
Cow position:
               
chr28:19079774-19079978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
258-460
               

               
Cow position:
               
chr28:10057517-10057720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
259-450
               

               
Cow position:
               
chr28:3484648-3484459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
259-460
               

               
Cow position:
               
chr28:7512515-7512716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
259-477
               

               
Cow position:
               
chr28:7548989-7549205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
262-471
               

               
Cow position:
               
chr28:4058048-4057844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
271-465
               

               
Cow position:
               
chr28:3714858-3714668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
281-471
               

               
Cow position:
               
chr28:16252813-16253000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
286-475
               

               
Cow position:
               
chr28:15008214-15008017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
289-471
               

               
Cow position:
               
chr28:25424255-25424438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
292-476
               

               
Cow position:
               
chr28:28903627-28903817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
297-443
               

               
Cow position:
               
chr28:3105286-3105138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
300-474
               

               
Cow position:
               
chr28:5552912-5553086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
309-473
               

               
Cow position:
               
chr28:19024163-19023996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
310-454
               

               
Cow position:
               
chr28:118035-118176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr28:4022403-4022245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr28:4880249-4880403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 42
               

               
Conread position:
               
313-457
               

               
Cow position:
               
chr28:19394631-19394491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 24
               

               
Conread position:
               
313-471
               

               
Cow position:
               
chr28:22170695-22170857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
315-471
               

               
Cow position:
               
chr28:9390353-9390502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
315-475
               

               
Cow position:
               
chr28:22739802-22739649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
319-466
               

               
Cow position:
               
chr28:26784457-26784601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
330-453
               

               
Cow position:
               
chr28:16214901-16215026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
354-465
               

               
Cow position:
               
chr28:6051711-6051602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
356-465
               

               
Cow position:
               
chr28:16243783-16243892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 100
               

               
Conread position:
               
364-471
               

               
Cow position:
               
chr28:11451496-11451603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 17
               
Show alignments to all cow chromosomes.