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Cow genome map

           
Conread name:
           
Emb1-C0005181_A14
        

               
Conread position:
               
129-440
               

               
Cow position:
               
chr6:54490482-54490810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr6:17090846-17090494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
138-466
               

               
Cow position:
               
chr6:56376114-56376452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
142-466
               

               
Cow position:
               
chr6:35415303-35415620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
142-471
               

               
Cow position:
               
chr6:48806782-48807101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
144-453
               

               
Cow position:
               
chr6:6673305-6673014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
147-464
               

               
Cow position:
               
chr6:45064789-45065112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 207
               

               
Conread position:
               
150-466
               

               
Cow position:
               
chr6:36652643-36652319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
152-461
               

               
Cow position:
               
chr6:1907742-1907449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
155-310
               

               
Cow position:
               
chr6:13054006-13053849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
155-372
               

               
Cow position:
               
chr6:68046928-68047158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
155-466
               

               
Cow position:
               
chr6:7824965-7824664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
154, 83
               

               
Conread position:
               
155-466
               

               
Cow position:
               
chr6:56843356-56843056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
146, 64
               

               
Conread position:
               
155-470
               

               
Cow position:
               
chr6:65872105-65871797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
155-471
               

               
Cow position:
               
chr6:35774764-35775091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
155-471
               

               
Cow position:
               
chr6:47575128-47574800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 196
               

               
Conread position:
               
155-471
               

               
Cow position:
               
chr6:48572664-48572984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
155-475
               

               
Cow position:
               
chr6:14696151-14696482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 215
               

               
Conread position:
               
155-475
               

               
Cow position:
               
chr6:15997002-15997323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
155-475
               

               
Cow position:
               
chr6:28318594-28318293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
157-475
               

               
Cow position:
               
chr6:15782298-15782635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 314
               

               
Conread position:
               
157-475
               

               
Cow position:
               
chr6:65264315-65264650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 178
               

               
Conread position:
               
158-447
               

               
Cow position:
               
chr6:54478935-54479229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
70, 186
               

               
Conread position:
               
158-475
               

               
Cow position:
               
chr6:6994743-6995064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
70, 187
               

               
Conread position:
               
159-466
               

               
Cow position:
               
chr6:24004753-24004443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
57, 191
               

               
Conread position:
               
162-453
               

               
Cow position:
               
chr6:10487787-10487499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
162-475
               

               
Cow position:
               
chr6:27815268-27815583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
163-316
               

               
Cow position:
               
chr6:47772752-47772917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
163-320
               

               
Cow position:
               
chr6:48345790-48345629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
163-391
               

               
Cow position:
               
chr6:34235203-34235439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
163-395
               

               
Cow position:
               
chr6:41655826-41656073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
163-402
               

               
Cow position:
               
chr6:2899355-2899607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 188
               

               
Conread position:
               
163-409
               

               
Cow position:
               
chr6:36454385-36454634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 184
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr6:24558088-24557831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
163-422
               

               
Cow position:
               
chr6:34549605-34549343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
163-428
               

               
Cow position:
               
chr6:44623817-44623546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
46, 179
               

               
Conread position:
               
163-454
               

               
Cow position:
               
chr6:65873239-65872954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
163-455
               

               
Cow position:
               
chr6:55892964-55892680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr6:24222948-24223255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 142
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr6:24545824-24545514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 189
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr6:28477378-28477078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr6:33917628-33917952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 184
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr6:36645603-36645283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 162
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr6:54368717-54369005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
163-472
               

               
Cow position:
               
chr6:37463234-37462913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 186
               

               
Conread position:
               
163-474
               

               
Cow position:
               
chr6:31564123-31564446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr6:29210706-29210390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr6:37634998-37634675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr6:45596317-45596652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 188
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr6:47616411-47616723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr6:53674071-53673749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr6:63196952-63197282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
163-476
               

               
Cow position:
               
chr6:20196097-20196404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
164-303
               

               
Cow position:
               
chr6:54203844-54203997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
164-331
               

               
Cow position:
               
chr6:43651952-43651781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
164-461
               

               
Cow position:
               
chr6:55475465-55475151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 182
               

               
Conread position:
               
164-464
               

               
Cow position:
               
chr6:16626155-16625849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
164-465
               

               
Cow position:
               
chr6:12652408-12652107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr6:38218869-38218572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
164-471
               

               
Cow position:
               
chr6:3545887-3545590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
164-471
               

               
Cow position:
               
chr6:34195934-34196255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 191
               

               
Conread position:
               
164-471
               

               
Cow position:
               
chr6:57164617-57164321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
164-474
               

               
Cow position:
               
chr6:8787845-8788146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
164-475
               

               
Cow position:
               
chr6:4864345-4864657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 179
               

               
Conread position:
               
165-452
               

               
Cow position:
               
chr6:47026686-47026394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
60, 181
               

               
Conread position:
               
165-462
               

               
Cow position:
               
chr6:63047803-63047481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 316
               

               
Conread position:
               
165-466
               

               
Cow position:
               
chr6:61644629-61644936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
165-469
               

               
Cow position:
               
chr6:28810797-28811095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
165-469
               

               
Cow position:
               
chr6:60118369-60118045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 190
               

               
Conread position:
               
166-411
               

               
Cow position:
               
chr6:47305946-47306183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
167-442
               

               
Cow position:
               
chr6:33929348-33929626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
167-471
               

               
Cow position:
               
chr6:26450524-26450216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
169-415
               

               
Cow position:
               
chr6:51294490-51294234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
50, 176
               

               
Conread position:
               
169-471
               

               
Cow position:
               
chr6:899098-899395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
170-455
               

               
Cow position:
               
chr6:143181-143458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
171-465
               

               
Cow position:
               
chr6:24583029-24583329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
172-471
               

               
Cow position:
               
chr6:9008406-9008716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
52, 182
               

               
Conread position:
               
175-475
               

               
Cow position:
               
chr6:21736685-21736998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
175-477
               

               
Cow position:
               
chr6:21061699-21062004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
176-477
               

               
Cow position:
               
chr6:120431-120131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
144, 29
               

               
Conread position:
               
183-410
               

               
Cow position:
               
chr6:47958991-47958768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
183-413
               

               
Cow position:
               
chr6:2585123-2584894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
183-465
               

               
Cow position:
               
chr6:61137555-61137276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
187-465
               

               
Cow position:
               
chr6:7173567-7173852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
187-466
               

               
Cow position:
               
chr6:19427637-19427353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
187-466
               

               
Cow position:
               
chr6:58074224-58073948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
189-471
               

               
Cow position:
               
chr6:48803459-48803742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
189-477
               

               
Cow position:
               
chr6:59588224-59588521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
200-471
               

               
Cow position:
               
chr6:26728368-26728630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
206-473
               

               
Cow position:
               
chr6:33206893-33206640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
208-475
               

               
Cow position:
               
chr6:16707167-16706892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
211-465
               

               
Cow position:
               
chr6:38610121-38609869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
212-434
               

               
Cow position:
               
chr6:61142410-61142633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
212-471
               

               
Cow position:
               
chr6:36470411-36470673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
212-475
               

               
Cow position:
               
chr6:21111102-21110856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
212-476
               

               
Cow position:
               
chr6:38771431-38771176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
213-375
               

               
Cow position:
               
chr6:60451577-60451412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 129
               

               
Conread position:
               
213-394
               

               
Cow position:
               
chr6:46331069-46330891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
213-411
               

               
Cow position:
               
chr6:2078665-2078865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 129
               

               
Conread position:
               
213-415
               

               
Cow position:
               
chr6:16352204-16352396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
213-433
               

               
Cow position:
               
chr6:22215320-22215536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
213-433
               

               
Cow position:
               
chr6:57546079-57546288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
213-438
               

               
Cow position:
               
chr6:17068498-17068722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-441
               

               
Cow position:
               
chr6:37395250-37395483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-442
               

               
Cow position:
               
chr6:22985703-22985935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
213-442
               

               
Cow position:
               
chr6:24339431-24339207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr6:5330561-5330337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr6:10176152-10176374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr6:21514458-21514691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-444
               

               
Cow position:
               
chr6:2623923-2623703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
213-444
               

               
Cow position:
               
chr6:51835546-51835319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
213-447
               

               
Cow position:
               
chr6:35103178-35103416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 119
               

               
Conread position:
               
213-448
               

               
Cow position:
               
chr6:19695956-19695725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-448
               

               
Cow position:
               
chr6:38441322-38441092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
211, 121
               

               
Conread position:
               
213-452
               

               
Cow position:
               
chr6:23401843-23402076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr6:35993733-35993492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr6:61269464-61269221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
213-458
               

               
Cow position:
               
chr6:6067551-6067785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
213-459
               

               
Cow position:
               
chr6:28976890-28977128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-459
               

               
Cow position:
               
chr6:35726246-35726002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
213-461
               

               
Cow position:
               
chr6:42565837-42565593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
213-461
               

               
Cow position:
               
chr6:44867393-44867636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
213-462
               

               
Cow position:
               
chr6:15447048-15447299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-462
               

               
Cow position:
               
chr6:53519474-53519720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 123
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr6:4691826-4692078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr6:5113904-5114144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr6:6343580-6343327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 125
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr6:10039873-10039622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr6:13367435-13367194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr6:15242986-15242737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
94, 126
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr6:40032340-40032094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr6:53841356-53841598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
103, 125
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr6:57571629-57571378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr6:528134-528373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr6:3592547-3592301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr6:5095392-5095654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr6:14914086-14914345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr6:19446400-19446159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr6:25407242-25407492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr6:47799443-47799191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr6:67214899-67214644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 157
               

               
Conread position:
               
213-470
               

               
Cow position:
               
chr6:13565236-13564979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
213-470
               

               
Cow position:
               
chr6:21004826-21004564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:582123-582376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:3952668-3952414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:8637431-8637170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:8966247-8965988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 148
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:9219416-9219168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:10105829-10106097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:11169852-11169600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:11246916-11246658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:17313883-17313629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:18048871-18049135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 130
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:24468246-24468498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:24781411-24781664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:35842807-35842545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:36189847-36189592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:40774182-40774457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 260
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:43134789-43135049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:44194400-44194647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:53932698-53932952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:54573409-54573138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 256
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:54864510-54864776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:54867667-54867408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 139
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:60740164-60739910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:64432088-64431834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:66131454-66131198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr6:67951099-67950848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
213-472
               

               
Cow position:
               
chr6:15937705-15937956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
213-473
               

               
Cow position:
               
chr6:21590857-21590581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-474
               

               
Cow position:
               
chr6:47339206-47339465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr6:16764496-16764762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr6:35181107-35181367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
96, 118
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr6:37149339-37149079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr6:44078664-44078405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
91, 96
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr6:62437564-62437299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr6:65259342-65259586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
214-447
               

               
Cow position:
               
chr6:67282043-67281812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 118
               

               
Conread position:
               
214-453
               

               
Cow position:
               
chr6:6401099-6400863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
214-465
               

               
Cow position:
               
chr6:7189971-7190218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
214-465
               

               
Cow position:
               
chr6:12338148-12337885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
45, 139
               

               
Conread position:
               
214-473
               

               
Cow position:
               
chr6:6060423-6060671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
95, 120
               

               
Conread position:
               
214-473
               

               
Cow position:
               
chr6:40713350-40713608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
214-475
               

               
Cow position:
               
chr6:5302271-5302522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
215-448
               

               
Cow position:
               
chr6:35436142-35435912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
215-466
               

               
Cow position:
               
chr6:59069472-59069724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
217-466
               

               
Cow position:
               
chr6:6098120-6098384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
92, 254
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr6:10225511-10225737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
206, 85
               

               
Conread position:
               
218-466
               

               
Cow position:
               
chr6:56850163-56849912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
218-477
               

               
Cow position:
               
chr6:60667566-60667305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
5, 130
               

               
Conread position:
               
219-416
               

               
Cow position:
               
chr6:68652208-68652403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
219-419
               

               
Cow position:
               
chr6:17527446-17527641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
219-436
               

               
Cow position:
               
chr6:23353690-23353482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
219-447
               

               
Cow position:
               
chr6:12091850-12092075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
219-449
               

               
Cow position:
               
chr6:63298888-63299116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
219-465
               

               
Cow position:
               
chr6:17794621-17794855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
219-469
               

               
Cow position:
               
chr6:19264356-19264599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
219-473
               

               
Cow position:
               
chr6:46465964-46465716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
220-451
               

               
Cow position:
               
chr6:51969217-51968981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
220-471
               

               
Cow position:
               
chr6:31535426-31535672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
221-422
               

               
Cow position:
               
chr6:60468379-60468181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
221-436
               

               
Cow position:
               
chr6:36284381-36284171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr6:16700403-16700187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
221-454
               

               
Cow position:
               
chr6:60350151-60350384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
221-459
               

               
Cow position:
               
chr6:19292943-19292705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 139
               

               
Conread position:
               
221-461
               

               
Cow position:
               
chr6:7119478-7119705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-461
               

               
Cow position:
               
chr6:26915469-26915235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 7
               

               
Conread position:
               
221-461
               

               
Cow position:
               
chr6:66375192-66375425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr6:4559159-4559404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 104
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr6:5609306-5609539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr6:46865451-46865692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr6:10399763-10400001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr6:16191823-16191569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr6:58370902-58370653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
58, 123
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr6:67456859-67456613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
221-467
               

               
Cow position:
               
chr6:19013215-19012964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 118
               

               
Conread position:
               
221-467
               

               
Cow position:
               
chr6:27888492-27888248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
221-469
               

               
Cow position:
               
chr6:52478270-52478518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr6:11192330-11192571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr6:12551411-12551165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 87
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr6:28483157-28482914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr6:30974188-30973947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr6:59603067-59603312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr6:61515041-61515301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
221-473
               

               
Cow position:
               
chr6:66531681-66531928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-474
               

               
Cow position:
               
chr6:59718937-59718688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr6:16316457-16316196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr6:26909732-26909980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
203, 10
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr6:32122048-32121797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr6:48112337-48112088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr6:49002598-49002843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
150, 74
               

               
Conread position:
               
221-477
               

               
Cow position:
               
chr6:31526187-31525936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
222-456
               

               
Cow position:
               
chr6:66874490-66874259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
222-465
               

               
Cow position:
               
chr6:65871177-65870929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
222-466
               

               
Cow position:
               
chr6:1703946-1703718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
222-466
               

               
Cow position:
               
chr6:52901377-52901134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
222-471
               

               
Cow position:
               
chr6:9026658-9026412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 7
               

               
Conread position:
               
222-471
               

               
Cow position:
               
chr6:26043879-26043647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
134, 61
               

               
Conread position:
               
226-477
               

               
Cow position:
               
chr6:53401492-53401252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
228-443
               

               
Cow position:
               
chr6:12845510-12845307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
228-465
               

               
Cow position:
               
chr6:14958205-14958444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
228-466
               

               
Cow position:
               
chr6:38614947-38614719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
228-466
               

               
Cow position:
               
chr6:38641627-38641394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
228-467
               

               
Cow position:
               
chr6:242936-242707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
196, 60
               

               
Conread position:
               
228-475
               

               
Cow position:
               
chr6:54990866-54991114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 81
               

               
Conread position:
               
228-477
               

               
Cow position:
               
chr6:21231659-21231420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
229-465
               

               
Cow position:
               
chr6:17548840-17549080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 231
               

               
Conread position:
               
229-471
               

               
Cow position:
               
chr6:60057521-60057761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 104
               

               
Conread position:
               
229-475
               

               
Cow position:
               
chr6:27110731-27110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 123
               

               
Conread position:
               
230-462
               

               
Cow position:
               
chr6:33509919-33509693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
230-466
               

               
Cow position:
               
chr6:4383612-4383386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
230-466
               

               
Cow position:
               
chr6:34475428-34475652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
230-471
               

               
Cow position:
               
chr6:60442540-60442313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
230-475
               

               
Cow position:
               
chr6:20206408-20206162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
231-465
               

               
Cow position:
               
chr6:45388456-45388231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
139, 19
               

               
Conread position:
               
237-465
               

               
Cow position:
               
chr6:55763979-55763754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
237-466
               

               
Cow position:
               
chr6:41733758-41733525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
237-471
               

               
Cow position:
               
chr6:50984348-50984120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
237-471
               

               
Cow position:
               
chr6:60819638-60819410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
237-471
               

               
Cow position:
               
chr6:61631482-61631714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 106
               

               
Conread position:
               
237-477
               

               
Cow position:
               
chr6:54647378-54647638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
238-392
               

               
Cow position:
               
chr6:51086193-51086044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
238-443
               

               
Cow position:
               
chr6:4468893-4468690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
238-443
               

               
Cow position:
               
chr6:16103072-16103271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
238-443
               

               
Cow position:
               
chr6:16287936-16288130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
238-443
               

               
Cow position:
               
chr6:46558182-46557976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr6:1429765-1429539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
71, 96
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr6:28083897-28084111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr6:28156038-28156248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
187, 45
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr6:36196335-36196114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
186, 77
               

               
Conread position:
               
238-467
               

               
Cow position:
               
chr6:39093876-39093635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 228
               

               
Conread position:
               
238-475
               

               
Cow position:
               
chr6:51675034-51674800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 101
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr6:377250-377019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr6:12542805-12543045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr6:63720325-63720083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr6:41375893-41375693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr6:38207366-38207596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 112
               

               
Conread position:
               
241-467
               

               
Cow position:
               
chr6:7128281-7128503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 106
               

               
Conread position:
               
242-471
               

               
Cow position:
               
chr6:19996735-19996513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
243-454
               

               
Cow position:
               
chr6:60673685-60673480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
243-471
               

               
Cow position:
               
chr6:2547375-2547141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 108
               

               
Conread position:
               
245-465
               

               
Cow position:
               
chr6:20097841-20098063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
247-465
               

               
Cow position:
               
chr6:54365212-54365430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 93
               

               
Conread position:
               
247-471
               

               
Cow position:
               
chr6:2607722-2607511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
129, 56
               

               
Conread position:
               
247-472
               

               
Cow position:
               
chr6:46282888-46283106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
248-464
               

               
Cow position:
               
chr6:54036028-54036233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
249-460
               

               
Cow position:
               
chr6:60783984-60783774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 90
               

               
Conread position:
               
250-447
               

               
Cow position:
               
chr6:54600461-54600264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 117
               

               
Conread position:
               
250-460
               

               
Cow position:
               
chr6:54208022-54208233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
250-460
               

               
Cow position:
               
chr6:55209670-55209462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr6:16746456-16746235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr6:52412972-52412753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
250-473
               

               
Cow position:
               
chr6:1371113-1371339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 94
               

               
Conread position:
               
250-477
               

               
Cow position:
               
chr6:61608625-61608399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
252-474
               

               
Cow position:
               
chr6:25008830-25008601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
253-465
               

               
Cow position:
               
chr6:59297110-59296900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
254-471
               

               
Cow position:
               
chr6:3929427-3929213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
256-471
               

               
Cow position:
               
chr6:59109051-59108836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
259-443
               

               
Cow position:
               
chr6:20157437-20157253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
259-475
               

               
Cow position:
               
chr6:1499747-1499528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
259-477
               

               
Cow position:
               
chr6:60850276-60850502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
263-466
               

               
Cow position:
               
chr6:32287739-32287538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
263-466
               

               
Cow position:
               
chr6:67968510-67968710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
264-448
               

               
Cow position:
               
chr6:28148355-28148169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
264-465
               

               
Cow position:
               
chr6:46292249-46292443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
265-471
               

               
Cow position:
               
chr6:1770100-1770300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
266-447
               

               
Cow position:
               
chr6:54364895-54365085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
266-475
               

               
Cow position:
               
chr6:62924899-62925107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
267-399
               

               
Cow position:
               
chr6:8094193-8094324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
268-471
               

               
Cow position:
               
chr6:31635593-31635794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
270-471
               

               
Cow position:
               
chr6:57405032-57405234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
271-471
               

               
Cow position:
               
chr6:8804439-8804635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
272-443
               

               
Cow position:
               
chr6:58732220-58732384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
152, 18
               

               
Conread position:
               
280-465
               

               
Cow position:
               
chr6:14850631-14850815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
280-466
               

               
Cow position:
               
chr6:44099169-44098984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
280-471
               

               
Cow position:
               
chr6:44984416-44984224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
284-471
               

               
Cow position:
               
chr6:416187-415993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
302-473
               

               
Cow position:
               
chr6:60456889-60456723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
308-471
               

               
Cow position:
               
chr6:19351104-19351259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
308-471
               

               
Cow position:
               
chr6:53731578-53731416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
310-439
               

               
Cow position:
               
chr6:30688565-30688686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr6:40834418-40834574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr6:62479110-62479270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
310-477
               

               
Cow position:
               
chr6:20230776-20230942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
313-471
               

               
Cow position:
               
chr6:24515151-24515298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
313-477
               

               
Cow position:
               
chr6:16411238-16411079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
315-471
               

               
Cow position:
               
chr6:18968735-18968884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
315-477
               

               
Cow position:
               
chr6:38234004-38233844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
316-466
               

               
Cow position:
               
chr6:1510635-1510488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
319-471
               

               
Cow position:
               
chr6:48344374-48344227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
340-471
               

               
Cow position:
               
chr6:56848890-56849022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
358-471
               

               
Cow position:
               
chr6:45160286-45160399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
66, 98
               

               
Conread position:
               
362-475
               

               
Cow position:
               
chr6:32986994-32987108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 95
               
Show alignments to all cow chromosomes.