Cow genome map
| Conread name: | Emb1-C0005181_P23 |
| Conread position: | 1-220 |
| Cow position: | chr1:83072412-83072627 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-228 |
| Cow position: | chr1:79146845-79146621 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 192, 15 |
| Conread position: | 1-228 |
| Cow position: | chr1:81290476-81290697 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 174, 80 |
| Conread position: | 1-256 |
| Cow position: | chr1:28563596-28563340 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 152, 13 |
| Conread position: | 2-220 |
| Cow position: | chr1:89158155-89157945 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 2-222 |
| Cow position: | chr1:61005593-61005373 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 2-228 |
| Cow position: | chr1:1981143-1980917 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 2-243 |
| Cow position: | chr1:71078991-71078752 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 3-228 |
| Cow position: | chr1:54267966-54267747 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 3-229 |
| Cow position: | chr1:5597238-5597018 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 5-228 |
| Cow position: | chr1:78857356-78857133 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 154, 142 |
| Conread position: | 6-228 |
| Cow position: | chr1:88913296-88913513 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 6-228 |
| Cow position: | chr1:102529882-102529660 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 142, 6 |
| Conread position: | 6-229 |
| Cow position: | chr1:56618676-56618462 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 6-253 |
| Cow position: | chr1:81569052-81568810 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 114, 8 |
| Conread position: | 6-254 |
| Cow position: | chr1:23998959-23998704 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 126, 8 |
| Conread position: | 8-220 |
| Cow position: | chr1:89388316-89388528 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 143 |
| Conread position: | 8-226 |
| Cow position: | chr1:81481406-81481194 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 8-228 |
| Cow position: | chr1:20104242-20104459 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 8-243 |
| Cow position: | chr1:41027051-41027280 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-243 |
| Cow position: | chr1:86113422-86113188 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 6 |
| Conread position: | 8-280 |
| Cow position: | chr1:91023489-91023224 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 222, 51 |
| Conread position: | 9-228 |
| Cow position: | chr1:41056656-41056872 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 134, 11 |
| Conread position: | 9-246 |
| Cow position: | chr1:57575787-57575553 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 14-212 |
| Cow position: | chr1:87197802-87197997 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 14-228 |
| Cow position: | chr1:61884895-61885105 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 14-250 |
| Cow position: | chr1:25383652-25383883 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 17-228 |
| Cow position: | chr1:45315651-45315438 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 158, 130 |
| Conread position: | 24-227 |
| Cow position: | chr1:84811947-84811749 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 41-228 |
| Cow position: | chr1:55685969-55685785 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 41-228 |
| Cow position: | chr1:71946075-71945887 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 111, 163 |
| Conread position: | 41-251 |
| Cow position: | chr1:70483325-70483120 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.