Cow genome map
| Conread name: | Emb1-C0005181_P23 |
| Conread position: | 1-201 |
| Cow position: | chr11:34121144-34121342 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 125 |
| Conread position: | 1-225 |
| Cow position: | chr11:23407410-23407628 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 1-225 |
| Cow position: | chr11:27248441-27248656 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-227 |
| Cow position: | chr11:48295981-48296195 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-228 |
| Cow position: | chr11:20238622-20238847 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 1-228 |
| Cow position: | chr11:45435024-45435246 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 156 |
| Conread position: | 1-228 |
| Cow position: | chr11:46922940-46922716 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 133, 147 |
| Conread position: | 1-229 |
| Cow position: | chr11:33409316-33409094 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 1-241 |
| Cow position: | chr11:80564241-80564481 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 157, 13 |
| Conread position: | 1-255 |
| Cow position: | chr11:1625278-1625025 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 125, 162 |
| Conread position: | 2-228 |
| Cow position: | chr11:62620323-62620547 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 3-228 |
| Cow position: | chr11:17036580-17036361 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 4-252 |
| Cow position: | chr11:5961252-5961507 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 6-159 |
| Cow position: | chr11:16342278-16342125 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-220 |
| Cow position: | chr11:35580210-35580424 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 27, 153 |
| Conread position: | 6-226 |
| Cow position: | chr11:39060651-39060436 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 8-228 |
| Cow position: | chr11:50152861-50152642 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 146, 166 |
| Conread position: | 8-252 |
| Cow position: | chr11:17721849-17721606 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 9-228 |
| Cow position: | chr11:77319368-77319583 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 9-252 |
| Cow position: | chr11:40608640-40608398 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 158, 69 |
| Conread position: | 9-287 |
| Cow position: | chr11:63999134-63998860 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 221, 36 |
| Conread position: | 14-208 |
| Cow position: | chr11:30830655-30830467 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 14-229 |
| Cow position: | chr11:63866700-63866489 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 116, 35 |
| Conread position: | 24-252 |
| Cow position: | chr11:34646558-34646788 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 129, 213 |
| Conread position: | 24-266 |
| Cow position: | chr11:30895035-30894790 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 206, 134 |
| Conread position: | 26-228 |
| Cow position: | chr11:15017028-15017229 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 29-228 |
| Cow position: | chr11:43914265-43914464 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 131, 86 |
| Conread position: | 29-259 |
| Cow position: | chr11:63165673-63165451 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 32-255 |
| Cow position: | chr11:47784751-47784981 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 114, 93 |
Show alignments to all cow chromosomes.