Cow genome map
| Conread name: | Emb1-C0005181_P23 |
| Conread position: | 1-227 |
| Cow position: | chr2:80275330-80275106 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 65 |
| Conread position: | 1-228 |
| Cow position: | chr2:13672485-13672703 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 1-228 |
| Cow position: | chr2:19137925-19137703 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-228 |
| Cow position: | chr2:20947336-20947556 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 1-228 |
| Cow position: | chr2:39750080-39750304 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-228 |
| Cow position: | chr2:50905746-50905514 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 133, 148 |
| Conread position: | 1-228 |
| Cow position: | chr2:71437412-71437189 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 193, 16 |
| Conread position: | 1-234 |
| Cow position: | chr2:45542432-45542208 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-237 |
| Cow position: | chr2:21410183-21410426 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-237 |
| Cow position: | chr2:40257448-40257220 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 1-255 |
| Cow position: | chr2:61562060-61561821 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-257 |
| Cow position: | chr2:46033300-46033555 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 1-260 |
| Cow position: | chr2:46161921-46162173 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 229, 146 |
| Conread position: | 1-261 |
| Cow position: | chr2:56828604-56828340 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 57, 155 |
| Conread position: | 2-250 |
| Cow position: | chr2:41462457-41462216 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2-252 |
| Cow position: | chr2:69350600-69350356 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 2-266 |
| Cow position: | chr2:1422318-1422584 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 174, 12 |
| Conread position: | 5-228 |
| Cow position: | chr2:41248537-41248753 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 10, 135 |
| Conread position: | 5-228 |
| Cow position: | chr2:82116058-82116274 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 6-228 |
| Cow position: | chr2:13001769-13001984 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 187, 6 |
| Conread position: | 6-228 |
| Cow position: | chr2:50449941-50449722 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 173, 143 |
| Conread position: | 7-155 |
| Cow position: | chr2:15694176-15694322 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 7-228 |
| Cow position: | chr2:46351812-46351595 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 7-229 |
| Cow position: | chr2:46164530-46164313 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 8-227 |
| Cow position: | chr2:18997690-18997903 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 8-228 |
| Cow position: | chr2:19494185-19494402 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 8-228 |
| Cow position: | chr2:45596954-45597166 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 8-234 |
| Cow position: | chr2:45619418-45619203 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 8-252 |
| Cow position: | chr2:60091463-60091225 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 125 |
| Conread position: | 8-258 |
| Cow position: | chr2:17842015-17841769 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 198, 6 |
| Conread position: | 9-228 |
| Cow position: | chr2:62744036-62743822 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 9-231 |
| Cow position: | chr2:39334899-39334683 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 14-226 |
| Cow position: | chr2:40703689-40703485 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 14-254 |
| Cow position: | chr2:43591396-43591160 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 84 |
| Conread position: | 20-226 |
| Cow position: | chr2:35948696-35948495 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 21-228 |
| Cow position: | chr2:51099991-51099786 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 23-228 |
| Cow position: | chr2:1476396-1476596 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 187, 56 |
| Conread position: | 25-294 |
| Cow position: | chr2:42801028-42801289 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 43-228 |
| Cow position: | chr2:4207562-4207381 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 117, 0 |
Show alignments to all cow chromosomes.