Cow genome map
| Conread name: | Emb1-C0005181_P23 |
| Conread position: | 1-220 |
| Cow position: | chr3:54373920-54373702 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 125, 11 |
| Conread position: | 1-228 |
| Cow position: | chr3:74079696-74079475 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-252 |
| Cow position: | chr3:27274470-27274715 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 229, 79 |
| Conread position: | 1-262 |
| Cow position: | chr3:55177807-55177552 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 229, 146 |
| Conread position: | 2-227 |
| Cow position: | chr3:59610778-59610557 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 180, 145 |
| Conread position: | 2-256 |
| Cow position: | chr3:69785685-69785424 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 4-228 |
| Cow position: | chr3:57577638-57577859 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 5-229 |
| Cow position: | chr3:50768622-50768843 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 5-236 |
| Cow position: | chr3:49344636-49344868 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 150, 163 |
| Conread position: | 5-252 |
| Cow position: | chr3:59604789-59605030 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 6-192 |
| Cow position: | chr3:70565794-70565607 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 170, 143 |
| Conread position: | 6-196 |
| Cow position: | chr3:19626562-19626376 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 124 |
| Conread position: | 6-225 |
| Cow position: | chr3:53221957-53222172 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 6-228 |
| Cow position: | chr3:19585808-19586027 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 6-228 |
| Cow position: | chr3:53428971-53428755 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 6-236 |
| Cow position: | chr3:44932460-44932684 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 224, 94 |
| Conread position: | 6-243 |
| Cow position: | chr3:14546947-14547177 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 143, 6 |
| Conread position: | 6-244 |
| Cow position: | chr3:64196770-64197003 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 8-226 |
| Cow position: | chr3:10958292-10958083 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-228 |
| Cow position: | chr3:55189809-55189587 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 8-236 |
| Cow position: | chr3:79196707-79196934 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 147, 5 |
| Conread position: | 9-228 |
| Cow position: | chr3:54506654-54506869 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 9-238 |
| Cow position: | chr3:49363056-49363282 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 10-228 |
| Cow position: | chr3:78077133-78077353 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 144 |
| Conread position: | 11-226 |
| Cow position: | chr3:53084039-53083822 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 11-254 |
| Cow position: | chr3:22165466-22165229 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 14-244 |
| Cow position: | chr3:78092559-78092334 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 20-228 |
| Cow position: | chr3:75107732-75107935 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 24-259 |
| Cow position: | chr3:68156684-68156921 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 185 |
| Conread position: | 32-228 |
| Cow position: | chr3:52845521-52845718 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 120 |
| Conread position: | 41-256 |
| Cow position: | chr3:67407387-67407175 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 189, 106 |
| Conread position: | 62-255 |
| Cow position: | chr3:17531738-17531549 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 107 |
| Conread position: | 65-262 |
| Cow position: | chr3:32248014-32248206 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 97 |
Show alignments to all cow chromosomes.