Cow genome map
| Conread name: | Emb1-C0005181_P23 |
| Conread position: | 1-226 |
| Cow position: | chr5:69099709-69099931 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 1-227 |
| Cow position: | chr5:30253732-30253953 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-228 |
| Cow position: | chr5:26549148-26548929 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 144, 11 |
| Conread position: | 1-228 |
| Cow position: | chr5:40109482-40109698 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-228 |
| Cow position: | chr5:43402894-43403123 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 143, 131 |
| Conread position: | 1-236 |
| Cow position: | chr5:20288271-20288036 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 143, 7 |
| Conread position: | 1-254 |
| Cow position: | chr5:57074341-57074087 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 209, 26 |
| Conread position: | 2-226 |
| Cow position: | chr5:56070849-56071070 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 2-227 |
| Cow position: | chr5:50600038-50600259 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 91, 25 |
| Conread position: | 2-228 |
| Cow position: | chr5:45845702-45845476 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 6-228 |
| Cow position: | chr5:22667070-22667284 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 7-243 |
| Cow position: | chr5:65941255-65941022 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 194, 128 |
| Conread position: | 8-227 |
| Cow position: | chr5:56028542-56028332 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-236 |
| Cow position: | chr5:30629163-30628931 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 127 |
| Conread position: | 8-243 |
| Cow position: | chr5:69383251-69383479 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 8-252 |
| Cow position: | chr5:31052376-31052625 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 124, 189 |
| Conread position: | 9-228 |
| Cow position: | chr5:17087023-17086803 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 185, 79 |
| Conread position: | 14-226 |
| Cow position: | chr5:59626969-59626760 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 24-208 |
| Cow position: | chr5:38168906-38169087 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 106, 124 |
| Conread position: | 24-220 |
| Cow position: | chr5:46704287-46704094 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 24-228 |
| Cow position: | chr5:9894110-9893911 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 24-228 |
| Cow position: | chr5:17104865-17105059 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 41-228 |
| Cow position: | chr5:34288221-34288040 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 98-252 |
| Cow position: | chr5:74049910-74050068 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 49 |
Show alignments to all cow chromosomes.