Cow genome map
| Conread name: | Emb1-C0005181_P23 |
| Conread position: | 1-226 |
| Cow position: | chr7:49751134-49751356 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 159, 83 |
| Conread position: | 1-227 |
| Cow position: | chr7:35300412-35300193 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 1-227 |
| Cow position: | chr7:53053396-53053177 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 192, 13 |
| Conread position: | 2-193 |
| Cow position: | chr7:48714859-48715051 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 2-228 |
| Cow position: | chr7:39415915-39416135 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 155 |
| Conread position: | 3-228 |
| Cow position: | chr7:10415125-10414911 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-228 |
| Cow position: | chr7:50066109-50065888 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 148 |
| Conread position: | 5-227 |
| Cow position: | chr7:36856545-36856763 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 5-228 |
| Cow position: | chr7:17750831-17750612 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 5-228 |
| Cow position: | chr7:26263644-26263425 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 147 |
| Conread position: | 6-228 |
| Cow position: | chr7:15570048-15570266 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 6-255 |
| Cow position: | chr7:20534882-20535129 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 234, 141 |
| Conread position: | 6-256 |
| Cow position: | chr7:26871981-26871733 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 245, 152 |
| Conread position: | 6-256 |
| Cow position: | chr7:36665337-36665585 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 161, 12 |
| Conread position: | 7-228 |
| Cow position: | chr7:6044125-6043908 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 7-228 |
| Cow position: | chr7:12495109-12494892 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 134 |
| Conread position: | 8-208 |
| Cow position: | chr7:11487658-11487462 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-238 |
| Cow position: | chr7:32946082-32946307 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 214, 6 |
| Conread position: | 9-225 |
| Cow position: | chr7:9077797-9077582 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 137 |
| Conread position: | 9-228 |
| Cow position: | chr7:15559702-15559913 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 9-238 |
| Cow position: | chr7:60732623-60732391 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 9-251 |
| Cow position: | chr7:29505128-29505364 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 17-228 |
| Cow position: | chr7:31523566-31523775 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 19-226 |
| Cow position: | chr7:8658538-8658741 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 20-229 |
| Cow position: | chr7:17713447-17713232 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 172 |
| Conread position: | 21-229 |
| Cow position: | chr7:27079652-27079856 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 24-243 |
| Cow position: | chr7:20968445-20968668 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 132 |
| Conread position: | 25-228 |
| Cow position: | chr7:6469650-6469855 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 147 |
| Conread position: | 25-228 |
| Cow position: | chr7:8089194-8089391 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 41-228 |
| Cow position: | chr7:11784999-11784816 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 56-256 |
| Cow position: | chr7:46191899-46191703 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
Show alignments to all cow chromosomes.