Cow genome map
| Conread name: | Emb1-C0005181_P23 |
| Conread position: | 1-172 |
| Cow position: | chrX:878388-878221 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-227 |
| Cow position: | chrX:14883966-14883742 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 107, 125 |
| Conread position: | 1-227 |
| Cow position: | chrX:17794972-17795194 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 1-227 |
| Cow position: | chrX:22482707-22482474 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 1-227 |
| Cow position: | chrX:28940234-28940459 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 99, 28 |
| Conread position: | 1-228 |
| Cow position: | chrX:38549436-38549662 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 1-243 |
| Cow position: | chrX:27145594-27145830 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 1-243 |
| Cow position: | chrX:40685338-40685099 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 21 |
| Conread position: | 1-253 |
| Cow position: | chrX:26843281-26843027 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 1-259 |
| Cow position: | chrX:22392994-22392744 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 2-227 |
| Cow position: | chrX:37781118-37780897 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 2-228 |
| Cow position: | chrX:9252171-9251947 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 2-228 |
| Cow position: | chrX:37072379-37072602 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 154 |
| Conread position: | 2-243 |
| Cow position: | chrX:47345320-47345560 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 6 |
| Conread position: | 6-228 |
| Cow position: | chrX:2935952-2936169 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 6-228 |
| Cow position: | chrX:10252203-10251986 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 6-228 |
| Cow position: | chrX:34411841-34412064 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 171, 141 |
| Conread position: | 7-174 |
| Cow position: | chrX:40269487-40269655 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 7-252 |
| Cow position: | chrX:1466158-1466400 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 187, 142 |
| Conread position: | 8-228 |
| Cow position: | chrX:39290356-39290571 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 198, 117 |
| Conread position: | 8-229 |
| Cow position: | chrX:31436471-31436686 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 8-237 |
| Cow position: | chrX:16836289-16836070 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 8-244 |
| Cow position: | chrX:5118505-5118267 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 141 |
| Conread position: | 8-252 |
| Cow position: | chrX:42927826-42927589 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 222, 10 |
| Conread position: | 8-253 |
| Cow position: | chrX:34837066-34836830 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 229, 19 |
| Conread position: | 9-228 |
| Cow position: | chrX:11656079-11656294 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 20-236 |
| Cow position: | chrX:34505040-34504829 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 107 |
| Conread position: | 23-228 |
| Cow position: | chrX:20957250-20957455 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 153, 124 |
| Conread position: | 24-252 |
| Cow position: | chrX:27668945-27668715 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 209, 123 |
| Conread position: | 28-226 |
| Cow position: | chrX:34314041-34314235 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 41-228 |
| Cow position: | chrX:23359081-23358901 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 49-228 |
| Cow position: | chrX:6480558-6480379 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.