Cow genome map

Conread name: Emb1-C0005182_C04

Conread position: 1-140
Cow position: chr18:7952596-7952735 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 127, 51

Conread position: 1-140
Cow position: chr18:24529912-24529776 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-171
Cow position: chr18:48961891-48962069 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 1-177
Cow position: chr18:10977253-10977076 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 138, 46

Conread position: 1-177
Cow position: chr18:28657954-28657778 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-184
Cow position: chr18:1392615-1392426 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 1-184
Cow position: chr18:2864033-2863854 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 1-184
Cow position: chr18:24266450-24266260 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 128, 0

Conread position: 1-184
Cow position: chr18:54513073-54513261 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 1-185
Cow position: chr18:10322763-10322940 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 1-192
Cow position: chr18:38601928-38601734 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 1-193
Cow position: chr18:2146622-2146440 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 1-193
Cow position: chr18:9066655-9066852 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 1-193
Cow position: chr18:36768854-36768664 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 38

Conread position: 1-193
Cow position: chr18:45903937-45903744 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 130, 45

Conread position: 1-194
Cow position: chr18:47565784-47565968 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 1-201
Cow position: chr18:47125443-47125252 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 121, 0

Conread position: 1-202
Cow position: chr18:12584882-12584683 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 154, 0

Conread position: 1-202
Cow position: chr18:19193408-19193211 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 1-202
Cow position: chr18:25106902-25107109 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 93

Conread position: 1-202
Cow position: chr18:25757354-25757153 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 129, 59

Conread position: 1-202
Cow position: chr18:36449855-36450062 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 142, 0

Conread position: 1-202
Cow position: chr18:43796998-43796798 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 131, 121

Conread position: 1-203
Cow position: chr18:5072453-5072255 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 1-203
Cow position: chr18:9365876-9366084 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 30

Conread position: 1-203
Cow position: chr18:9846453-9846257 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 109

Conread position: 1-203
Cow position: chr18:24719270-24719471 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 194, 129

Conread position: 1-203
Cow position: chr18:30341223-30341020 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 132, 30

Conread position: 1-203
Cow position: chr18:51192783-51192586 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 129, 0

Conread position: 1-203
Cow position: chr18:55499029-55499232 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 126, 76

Conread position: 1-204
Cow position: chr18:346540-346332 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 130, 32

Conread position: 1-204
Cow position: chr18:2592207-2591997 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 130, 46

Conread position: 1-204
Cow position: chr18:3180368-3180573 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 127, 0

Conread position: 1-204
Cow position: chr18:3211835-3212043 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 129, 0

Conread position: 1-204
Cow position: chr18:21969846-21969638 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 120, 20

Conread position: 1-204
Cow position: chr18:23623676-23623467 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 131, 117

Conread position: 1-204
Cow position: chr18:43950783-43950991 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 1-204
Cow position: chr18:48713508-48713705 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 1-204
Cow position: chr18:55692773-55692981 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 129, 154

Conread position: 1-205
Cow position: chr18:2773435-2773223 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 1-205
Cow position: chr18:4556209-4556000 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 45

Conread position: 1-205
Cow position: chr18:5647770-5647972 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 129, 0

Conread position: 1-205
Cow position: chr18:11691451-11691242 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 120, 63

Conread position: 1-205
Cow position: chr18:17391036-17390826 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 63

Conread position: 1-205
Cow position: chr18:18919001-18918799 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 55, 0

Conread position: 1-205
Cow position: chr18:19765146-19765350 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1-205
Cow position: chr18:23630647-23630451 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-205
Cow position: chr18:45558104-45558307 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 25, 21

Conread position: 1-205
Cow position: chr18:47693023-47693218 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 1-205
Cow position: chr18:51383438-51383234 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 9

Conread position: 1-205
Cow position: chr18:56155478-56155680 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 23

Conread position: 1-209
Cow position: chr18:51643408-51643201 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 1-216
Cow position: chr18:49015086-49015291 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 46

Conread position: 1-217
Cow position: chr18:28930679-28930466 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 1-218
Cow position: chr18:10065569-10065340 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1-220
Cow position: chr18:50359289-50359504 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 1-220
Cow position: chr18:50382210-50382430 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 127, 19

Conread position: 1-221
Cow position: chr18:10051705-10051925 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 128, 14

Conread position: 1-221
Cow position: chr18:44262588-44262803 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 18, 29

Conread position: 1-221
Cow position: chr18:49038419-49038635 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 204, 172

Conread position: 1-223
Cow position: chr18:43283799-43283570 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 130, 95

Conread position: 1-224
Cow position: chr18:18592430-18592646 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 119, 0

Conread position: 1-224
Cow position: chr18:47486001-47486231 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 133, 109

Conread position: 1-224
Cow position: chr18:50632485-50632262 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 28

Conread position: 1-225
Cow position: chr18:18843971-18844196 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 20, 58

Conread position: 1-229
Cow position: chr18:25601362-25601137 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 138, 13

Conread position: 1-232
Cow position: chr18:15517214-15516983 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 76

Conread position: 1-233
Cow position: chr18:19868301-19868068 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 30

Conread position: 1-234
Cow position: chr18:4264436-4264204 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 73, 27

Conread position: 1-234
Cow position: chr18:19687981-19688218 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 109, 212

Conread position: 1-234
Cow position: chr18:55701707-55701469 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 108, 204

Conread position: 1-236
Cow position: chr18:5600593-5600832 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 210

Conread position: 1-238
Cow position: chr18:4927026-4927263 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 132, 87

Conread position: 1-238
Cow position: chr18:56181504-56181257 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 91

Conread position: 1-239
Cow position: chr18:45898849-45899091 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 142, 209

Conread position: 1-241
Cow position: chr18:6005543-6005305 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 20, 118

Conread position: 1-241
Cow position: chr18:9029567-9029812 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 217

Conread position: 1-242
Cow position: chr18:23169535-23169779 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 133, 204

Conread position: 1-246
Cow position: chr18:6470052-6470295 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 115, 122

Conread position: 1-248
Cow position: chr18:30586264-30586029 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 1-253
Cow position: chr18:44909010-44909265 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 1-260
Cow position: chr18:51405949-51405701 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 1-264
Cow position: chr18:43014903-43014651 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 1-291
Cow position: chr18:7956103-7956397 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 181

Conread position: 2-170
Cow position: chr18:912145-911984 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 39

Conread position: 2-171
Cow position: chr18:46647198-46647033 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 2-185
Cow position: chr18:49655643-49655825 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 58, 45

Conread position: 2-194
Cow position: chr18:37382130-37381938 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 108, 22

Conread position: 2-203
Cow position: chr18:11867295-11867500 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 65, 123

Conread position: 2-203
Cow position: chr18:12058961-12059156 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 2-203
Cow position: chr18:33158901-33159105 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 128, 20

Conread position: 2-203
Cow position: chr18:46880747-46880545 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 126, 108

Conread position: 2-204
Cow position: chr18:23648880-23649089 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 130, 0

Conread position: 2-205
Cow position: chr18:42479628-42479416 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 2-222
Cow position: chr18:20318083-20317880 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 203, 41

Conread position: 2-222
Cow position: chr18:42212403-42212631 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 141, 177

Conread position: 2-223
Cow position: chr18:55747644-55747872 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 141, 78

Conread position: 2-226
Cow position: chr18:7415072-7414848 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 72, 23

Conread position: 2-229
Cow position: chr18:47416960-47417189 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 135, 75

Conread position: 2-232
Cow position: chr18:5766371-5766596 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 44

Conread position: 2-232
Cow position: chr18:18962383-18962624 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 2-239
Cow position: chr18:52637571-52637331 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 119, 209

Conread position: 2-246
Cow position: chr18:23447103-23446852 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 130, 0

Conread position: 2-248
Cow position: chr18:24508278-24508015 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 2-254
Cow position: chr18:15809842-15809597 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 203, 53

Conread position: 3-131
Cow position: chr18:2549344-2549216 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-170
Cow position: chr18:858783-858954 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 3-172
Cow position: chr18:11754089-11754264 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 125, 0

Conread position: 3-175
Cow position: chr18:2774179-2774002 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 131, 107

Conread position: 3-177
Cow position: chr18:19157833-19158013 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 3-179
Cow position: chr18:7481112-7481289 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 18

Conread position: 3-185
Cow position: chr18:10904809-10904991 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 26

Conread position: 3-185
Cow position: chr18:24759697-24759515 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-185
Cow position: chr18:39001844-39001670 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 44

Conread position: 3-185
Cow position: chr18:40047539-40047360 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 3-185
Cow position: chr18:48113003-48112822 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 129, 18

Conread position: 3-193
Cow position: chr18:22516575-22516384 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 6

Conread position: 3-194
Cow position: chr18:35874039-35874231 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 145, 18

Conread position: 3-202
Cow position: chr18:4649520-4649713 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 55

Conread position: 3-202
Cow position: chr18:7965191-7965393 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 125, 74

Conread position: 3-202
Cow position: chr18:46276343-46276138 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 3-203
Cow position: chr18:10214232-10214029 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 3-203
Cow position: chr18:39662738-39662943 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 123, 95

Conread position: 3-204
Cow position: chr18:51757053-51757257 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 130, 77

Conread position: 3-204
Cow position: chr18:52251898-52251691 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 3-204
Cow position: chr18:55549689-55549895 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 37

Conread position: 3-205
Cow position: chr18:135695-135496 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 3-205
Cow position: chr18:727994-728185 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 3-205
Cow position: chr18:1144224-1144028 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 3-205
Cow position: chr18:14586511-14586315 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 131, 0

Conread position: 3-205
Cow position: chr18:19640931-19641138 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 125, 181

Conread position: 3-205
Cow position: chr18:23653164-23652949 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 161

Conread position: 3-205
Cow position: chr18:29371826-29372034 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 122, 0

Conread position: 3-205
Cow position: chr18:31672553-31672354 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 3-205
Cow position: chr18:38937781-38937984 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 129, 8

Conread position: 3-205
Cow position: chr18:50566860-50567068 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 3-205
Cow position: chr18:50959445-50959653 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 45

Conread position: 3-209
Cow position: chr18:14225353-14225557 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 202, 172

Conread position: 3-216
Cow position: chr18:50974335-50974113 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 88, 196

Conread position: 3-218
Cow position: chr18:14172248-14172037 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 123, 44

Conread position: 3-218
Cow position: chr18:32873550-32873774 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 3-219
Cow position: chr18:42427579-42427794 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 3-222
Cow position: chr18:12273617-12273833 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 3-222
Cow position: chr18:34813606-34813835 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 110

Conread position: 3-222
Cow position: chr18:37188038-37187811 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 133, 0

Conread position: 3-223
Cow position: chr18:32253550-32253322 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 119, 68

Conread position: 3-224
Cow position: chr18:16545503-16545277 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 140, 18

Conread position: 3-224
Cow position: chr18:17956422-17956194 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 53

Conread position: 3-228
Cow position: chr18:11233375-11233609 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 132, 15

Conread position: 3-228
Cow position: chr18:39623759-39623990 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 123, 215

Conread position: 3-230
Cow position: chr18:27078827-27079055 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 127, 41

Conread position: 3-236
Cow position: chr18:19796964-19796722 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 0

Conread position: 3-237
Cow position: chr18:30225571-30225336 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 142, 207

Conread position: 3-237
Cow position: chr18:46880210-46879963 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 3-238
Cow position: chr18:21782650-21782883 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 129, 38

Conread position: 3-238
Cow position: chr18:31557201-31556960 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 3-240
Cow position: chr18:4495927-4495689 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 164

Conread position: 3-251
Cow position: chr18:52684642-52684391 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 18

Conread position: 3-253
Cow position: chr18:25063875-25063614 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 0

Conread position: 4-185
Cow position: chr18:23941663-23941474 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 23

Conread position: 4-192
Cow position: chr18:15613900-15613713 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 4-192
Cow position: chr18:29474704-29474889 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 4-193
Cow position: chr18:26998843-26999041 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 4-193
Cow position: chr18:42290367-42290182 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 141, 0

Conread position: 4-193
Cow position: chr18:42293095-42292910 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 141, 0

Conread position: 4-204
Cow position: chr18:20271059-20270848 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 63

Conread position: 4-205
Cow position: chr18:35827413-35827214 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 127, 50

Conread position: 4-220
Cow position: chr18:38211121-38211340 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 139, 54

Conread position: 4-221
Cow position: chr18:1735622-1735416 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 133, 60

Conread position: 4-221
Cow position: chr18:23615920-23615693 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 17, 93

Conread position: 4-227
Cow position: chr18:5632228-5632451 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-232
Cow position: chr18:4668538-4668316 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 127, 34

Conread position: 4-232
Cow position: chr18:53053274-53053036 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 122, 0

Conread position: 4-233
Cow position: chr18:247728-247505 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 122, 37

Conread position: 4-233
Cow position: chr18:16659472-16659234 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 115, 0

Conread position: 4-238
Cow position: chr18:2794011-2793780 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 5-193
Cow position: chr18:7109091-7109283 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 122, 0

Conread position: 5-204
Cow position: chr18:22328104-22328309 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 126, 191

Conread position: 5-234
Cow position: chr18:18961874-18961640 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 105

Conread position: 5-248
Cow position: chr18:3164553-3164307 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 83, 75

Conread position: 6-139
Cow position: chr18:21380606-21380472 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 6-141
Cow position: chr18:19273134-19273001 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 6-185
Cow position: chr18:31727692-31727501 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 6-220
Cow position: chr18:26873387-26873595 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 6-225
Cow position: chr18:238153-237929 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 127, 9

Conread position: 7-184
Cow position: chr18:9896031-9895854 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 79

Conread position: 7-203
Cow position: chr18:5730280-5730075 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 14

Conread position: 7-204
Cow position: chr18:54572329-54572125 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 8-203
Cow position: chr18:32243764-32243578 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 87, 38

Conread position: 8-222
Cow position: chr18:16227521-16227742 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 102

Conread position: 11-203
Cow position: chr18:19809715-19809521 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 119, 0

Conread position: 11-203
Cow position: chr18:47868577-47868758 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 11-204
Cow position: chr18:34490247-34490444 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 11-218
Cow position: chr18:39710076-39710293 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 115, 5

Conread position: 11-232
Cow position: chr18:45185838-45186058 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 5, 183

Conread position: 12-203
Cow position: chr18:42967088-42967266 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 46

Conread position: 12-205
Cow position: chr18:8208457-8208259 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 109, 0

Conread position: 12-205
Cow position: chr18:23810152-23809957 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 160

Conread position: 12-229
Cow position: chr18:18664405-18664178 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 225

Conread position: 12-240
Cow position: chr18:33756989-33757219 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 29

Conread position: 13-204
Cow position: chr18:52382873-52383070 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 118, 0

Conread position: 13-225
Cow position: chr18:20998447-20998228 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 203

Conread position: 13-234
Cow position: chr18:39811614-39811391 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 113, 197

Conread position: 13-253
Cow position: chr18:49970684-49970434 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 103, 169

Conread position: 14-170
Cow position: chr18:3518238-3518393 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 53, 27

Conread position: 14-175
Cow position: chr18:4715636-4715475 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 25

Conread position: 14-179
Cow position: chr18:23821862-23821691 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 145
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 116, 0

Conread position: 14-225
Cow position: chr18:35795252-35795035 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 127, 96

Conread position: 14-235
Cow position: chr18:21751347-21751574 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 15-204
Cow position: chr18:11330190-11330386 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 16-175
Cow position: chr18:47920719-47920883 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 126, 11

Conread position: 16-193
Cow position: chr18:4489936-4489749 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 16-245
Cow position: chr18:51395913-51395690 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 190, 102

Conread position: 20-239
Cow position: chr18:3412340-3412562 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 9

Conread position: 22-209
Cow position: chr18:24022596-24022783 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 22-235
Cow position: chr18:14587250-14587467 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 11

Conread position: 24-203
Cow position: chr18:25598252-25598071 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 24-205
Cow position: chr18:31972-32155 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 156

Conread position: 24-221
Cow position: chr18:29188366-29188578 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 24-223
Cow position: chr18:2144551-2144751 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 189

Conread position: 24-224
Cow position: chr18:32992363-32992563 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 24-226
Cow position: chr18:23380108-23380313 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 7, 98

Conread position: 24-228
Cow position: chr18:1859152-1858947 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 25

Conread position: 25-203
Cow position: chr18:19229900-19230084 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 6

Conread position: 25-203
Cow position: chr18:19831567-19831737 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 25-203
Cow position: chr18:21562945-21562761 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 25-205
Cow position: chr18:2108228-2108412 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 81

Conread position: 25-205
Cow position: chr18:29798293-29798119 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 25-205
Cow position: chr18:30786721-30786894 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 107

Conread position: 25-205
Cow position: chr18:37303133-37303318 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 25-222
Cow position: chr18:39460201-39460396 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 159, 0

Conread position: 25-224
Cow position: chr18:45573361-45573563 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 118, 190

Conread position: 25-230
Cow position: chr18:41702818-41703025 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 105, 21

Conread position: 25-230
Cow position: chr18:43801777-43801570 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 27

Conread position: 25-238
Cow position: chr18:14871628-14871407 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 54

Conread position: 25-248
Cow position: chr18:49161322-49161097 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 113, 85

Conread position: 26-192
Cow position: chr18:26586632-26586461 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 90

Conread position: 26-204
Cow position: chr18:4530541-4530718 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 136

Conread position: 26-204
Cow position: chr18:7134258-7134444 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 26-204
Cow position: chr18:22905976-22905792 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 26-205
Cow position: chr18:49281081-49280899 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 106, 162

Conread position: 26-217
Cow position: chr18:697235-697045 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 108, 51

Conread position: 26-230
Cow position: chr18:35582056-35581861 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 176, 51

Conread position: 26-234
Cow position: chr18:6454000-6454202 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 78

Conread position: 26-245
Cow position: chr18:4718241-4718464 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 105, 162

Conread position: 27-198
Cow position: chr18:29065400-29065235 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 27-202
Cow position: chr18:30360166-30359982 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 27-204
Cow position: chr18:47802107-47801933 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 20

Conread position: 27-205
Cow position: chr18:22790105-22789926 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 113, 95

Conread position: 27-221
Cow position: chr18:28322640-28322831 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 27-222
Cow position: chr18:29648767-29648961 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 27-229
Cow position: chr18:11856884-11857084 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 196, 103

Conread position: 27-231
Cow position: chr18:35950018-35950234 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 191

Conread position: 28-140
Cow position: chr18:11672820-11672931 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 19

Conread position: 28-184
Cow position: chr18:38523644-38523796 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 28-203
Cow position: chr18:45897716-45897889 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 28-224
Cow position: chr18:10576095-10576286 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 28-224
Cow position: chr18:39860787-39860595 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 36

Conread position: 28-228
Cow position: chr18:52387236-52387032 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 115, 188

Conread position: 28-233
Cow position: chr18:17195361-17195157 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 109, 180

Conread position: 28-242
Cow position: chr18:21528631-21528849 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 188

Conread position: 29-204
Cow position: chr18:16381843-16382024 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 29-205
Cow position: chr18:11434738-11434916 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 30-213
Cow position: chr18:35236047-35235849 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 31-205
Cow position: chr18:5189706-5189527 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 147
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 101, 131

Conread position: 31-205
Cow position: chr18:28822765-28822599 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 31-217
Cow position: chr18:8975383-8975567 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 105, 0

Conread position: 31-223
Cow position: chr18:21051096-21050906 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 174, 95

Conread position: 31-229
Cow position: chr18:26262226-26262025 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 39

Conread position: 32-185
Cow position: chr18:43125074-43125221 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 32-193
Cow position: chr18:8171097-8170939 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 32-204
Cow position: chr18:21401313-21401135 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 32-261
Cow position: chr18:56463742-56463506 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 99, 42

Conread position: 33-182
Cow position: chr18:39115129-39114974 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 87

Conread position: 33-218
Cow position: chr18:21724180-21723988 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 35-193
Cow position: chr18:35857933-35857772 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 35-204
Cow position: chr18:44044351-44044177 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 10

Conread position: 36-221
Cow position: chr18:9010700-9010885 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 36-233
Cow position: chr18:55723663-55723867 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 77, 41

Conread position: 37-236
Cow position: chr18:35535153-35534959 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 141

Conread position: 38-193
Cow position: chr18:44548753-44548594 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 39-205
Cow position: chr18:1399360-1399188 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 39-246
Cow position: chr18:22045418-22045205 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 87, 26

Conread position: 40-233
Cow position: chr18:22180774-22180592 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 40-260
Cow position: chr18:9596179-9596397 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 191, 88

Conread position: 41-205
Cow position: chr18:9818765-9818927 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 42-224
Cow position: chr18:47175383-47175198 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 90, 35

Conread position: 43-191
Cow position: chr18:48594218-48594065 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 5, 145

Conread position: 44-227
Cow position: chr18:3709230-3709415 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 89, 58

Conread position: 46-202
Cow position: chr18:36501076-36500921 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 83

Conread position: 46-248
Cow position: chr18:49127015-49126817 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 31

Conread position: 47-205
Cow position: chr18:50004702-50004542 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 47-229
Cow position: chr18:44514089-44514280 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 48-204
Cow position: chr18:16313383-16313539 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 48-218
Cow position: chr18:15351726-15351551 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 83, 135

Conread position: 48-241
Cow position: chr18:36098370-36098556 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 49-201
Cow position: chr18:3066349-3066496 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 146, 69

Conread position: 50-218
Cow position: chr18:10517108-10517286 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 140

Conread position: 51-222
Cow position: chr18:4485606-4485776 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 161, 0

Conread position: 55-228
Cow position: chr18:34389372-34389191 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 41

Conread position: 56-205
Cow position: chr18:10668345-10668499 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 118

Conread position: 57-232
Cow position: chr18:1662572-1662391 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 170

Conread position: 59-201
Cow position: chr18:28540097-28539950 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 122

Conread position: 59-224
Cow position: chr18:10758040-10757874 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 59-231
Cow position: chr18:35171363-35171540 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 134

Conread position: 61-234
Cow position: chr18:37690167-37690345 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 64-343
Cow position: chr18:29945552-29945839 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 122

Conread position: 65-205
Cow position: chr18:33364233-33364374 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 67-204
Cow position: chr18:7487255-7487398 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 67-205
Cow position: chr18:10117763-10117900 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 75

Conread position: 70-205
Cow position: chr18:15279673-15279807 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 71-219
Cow position: chr18:36296715-36296569 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 100

Conread position: 93-253
Cow position: chr18:30295557-30295402 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 57

Show alignments to all cow chromosomes.