Cow genome map

Conread name: Emb1-C0005182_C04

Conread position: 1-141
Cow position: chr27:18922867-18923004 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1-142
Cow position: chr27:23895386-23895250 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-180
Cow position: chr27:16230968-16231156 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 1-182
Cow position: chr27:6290440-6290253 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 0

Conread position: 1-182
Cow position: chr27:11815781-11815966 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 1-182
Cow position: chr27:19485840-19485653 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 142, 0

Conread position: 1-182
Cow position: chr27:24007434-24007247 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 0

Conread position: 1-182
Cow position: chr27:24731073-24731256 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 77

Conread position: 1-183
Cow position: chr27:27442203-27442379 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 0

Conread position: 1-184
Cow position: chr27:6541598-6541415 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-184
Cow position: chr27:14818199-14818010 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 1-184
Cow position: chr27:22735626-22735814 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 130, 14

Conread position: 1-184
Cow position: chr27:29613522-29613711 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 109

Conread position: 1-185
Cow position: chr27:7935190-7935379 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 1-185
Cow position: chr27:11993900-11994088 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 128, 160

Conread position: 1-185
Cow position: chr27:19452968-19452778 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 1-185
Cow position: chr27:21393541-21393714 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 1-185
Cow position: chr27:22552917-22553099 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 1-185
Cow position: chr27:26883290-26883481 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 43

Conread position: 1-185
Cow position: chr27:29319377-29319185 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 140, 115

Conread position: 1-192
Cow position: chr27:19660898-19660700 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 124, 0

Conread position: 1-193
Cow position: chr27:11159974-11159786 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 1-194
Cow position: chr27:23890904-23890703 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 1-198
Cow position: chr27:16705217-16705019 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 143, 0

Conread position: 1-201
Cow position: chr27:26121726-26121521 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 131, 0

Conread position: 1-201
Cow position: chr27:27058439-27058642 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 20

Conread position: 1-201
Cow position: chr27:27648351-27648552 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 134, 0

Conread position: 1-202
Cow position: chr27:15865573-15865372 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-202
Cow position: chr27:26852620-26852820 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 20

Conread position: 1-203
Cow position: chr27:212923-212712 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 23

Conread position: 1-203
Cow position: chr27:3306739-3306547 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 1-203
Cow position: chr27:8790775-8790981 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 159

Conread position: 1-203
Cow position: chr27:11561742-11561536 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 127, 188

Conread position: 1-204
Cow position: chr27:8062384-8062592 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 120, 105

Conread position: 1-204
Cow position: chr27:10979829-10979620 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 0

Conread position: 1-204
Cow position: chr27:12658382-12658593 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 1-204
Cow position: chr27:13639017-13639227 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 1-204
Cow position: chr27:19681918-19681709 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 1-204
Cow position: chr27:20078830-20078625 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 142, 46

Conread position: 1-204
Cow position: chr27:22401452-22401243 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 0

Conread position: 1-204
Cow position: chr27:22513711-22513921 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 1-204
Cow position: chr27:24227828-24228044 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 1-204
Cow position: chr27:28896848-28896638 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 88, 40

Conread position: 1-205
Cow position: chr27:426935-426729 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 49

Conread position: 1-205
Cow position: chr27:7412359-7412152 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 130, 0

Conread position: 1-205
Cow position: chr27:18435167-18435371 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1-205
Cow position: chr27:23452427-23452222 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 138, 37

Conread position: 1-205
Cow position: chr27:26111948-26112159 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-205
Cow position: chr27:30868774-30868992 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 1-209
Cow position: chr27:30582700-30582495 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 58

Conread position: 1-213
Cow position: chr27:12596737-12596533 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 41

Conread position: 1-213
Cow position: chr27:24331686-24331465 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 132, 23

Conread position: 1-215
Cow position: chr27:15003012-15003229 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 120, 210

Conread position: 1-217
Cow position: chr27:1636969-1637179 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 0

Conread position: 1-218
Cow position: chr27:28001846-28002057 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 1-219
Cow position: chr27:299415-299629 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 1-219
Cow position: chr27:12459250-12459036 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 23

Conread position: 1-219
Cow position: chr27:28518264-28518041 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 201

Conread position: 1-221
Cow position: chr27:3518471-3518246 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 214

Conread position: 1-223
Cow position: chr27:17397488-17397711 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 21

Conread position: 1-224
Cow position: chr27:25152051-25151827 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 129, 40

Conread position: 1-226
Cow position: chr27:30890257-30890041 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 1-227
Cow position: chr27:27055252-27055035 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-227
Cow position: chr27:27558538-27558768 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 64

Conread position: 1-229
Cow position: chr27:15315483-15315259 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 25

Conread position: 1-229
Cow position: chr27:17933892-17933657 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 1-229
Cow position: chr27:22035411-22035636 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 1-232
Cow position: chr27:26481229-26481465 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 136, 69

Conread position: 1-234
Cow position: chr27:29593663-29593895 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 46

Conread position: 1-235
Cow position: chr27:31373017-31373241 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 51

Conread position: 1-237
Cow position: chr27:31386664-31386904 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 1-238
Cow position: chr27:19607693-19607933 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 41

Conread position: 1-241
Cow position: chr27:4944548-4944784 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 209, 116

Conread position: 1-241
Cow position: chr27:20354556-20354320 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 46

Conread position: 1-242
Cow position: chr27:26245581-26245829 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 130, 46

Conread position: 1-251
Cow position: chr27:23860127-23859873 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 28

Conread position: 1-252
Cow position: chr27:15871127-15870879 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 130, 109

Conread position: 1-252
Cow position: chr27:20869716-20869963 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 188

Conread position: 1-261
Cow position: chr27:21666112-21666378 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 226

Conread position: 1-266
Cow position: chr27:2885866-2886137 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 142, 183

Conread position: 1-271
Cow position: chr27:20514785-20514521 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 40

Conread position: 1-272
Cow position: chr27:20719254-20718980 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 119, 211

Conread position: 2-139
Cow position: chr27:27673051-27673187 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 2-177
Cow position: chr27:13251977-13251811 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 19

Conread position: 2-180
Cow position: chr27:17646203-17646373 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 2-184
Cow position: chr27:6500026-6499838 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 2-185
Cow position: chr27:6319884-6319702 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 119, 0

Conread position: 2-193
Cow position: chr27:23560066-23560258 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 2-193
Cow position: chr27:26188794-26188598 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 128, 39

Conread position: 2-203
Cow position: chr27:20548776-20548571 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 124, 0

Conread position: 2-204
Cow position: chr27:20612486-20612281 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 41

Conread position: 2-205
Cow position: chr27:22171262-22171061 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 44

Conread position: 2-220
Cow position: chr27:22547434-22547648 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 203, 44

Conread position: 2-223
Cow position: chr27:16103772-16103553 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 136, 44

Conread position: 2-228
Cow position: chr27:2592508-2592274 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 48, 212

Conread position: 2-229
Cow position: chr27:26509192-26509421 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 41

Conread position: 2-240
Cow position: chr27:30914974-30914733 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 134, 39

Conread position: 2-246
Cow position: chr27:13875693-13875454 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 24

Conread position: 2-270
Cow position: chr27:1353548-1353278 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 199

Conread position: 3-111
Cow position: chr27:715464-715357 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 3-141
Cow position: chr27:27270576-27270715 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 22, 120

Conread position: 3-152
Cow position: chr27:23545365-23545515 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 3-175
Cow position: chr27:1768660-1768833 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 128, 26

Conread position: 3-182
Cow position: chr27:15925310-15925124 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 123, 0

Conread position: 3-185
Cow position: chr27:7958866-7959052 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 102

Conread position: 3-185
Cow position: chr27:15332331-15332509 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 65, 118

Conread position: 3-186
Cow position: chr27:28478544-28478362 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 3-191
Cow position: chr27:15866181-15865991 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 18

Conread position: 3-194
Cow position: chr27:24709517-24709324 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 137, 16

Conread position: 3-200
Cow position: chr27:29160022-29160220 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 58, 18

Conread position: 3-201
Cow position: chr27:30455958-30455756 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 141, 0

Conread position: 3-203
Cow position: chr27:20897061-20897259 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 128, 43

Conread position: 3-204
Cow position: chr27:6925049-6924842 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 127, 0

Conread position: 3-204
Cow position: chr27:19292844-19293054 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 3-204
Cow position: chr27:26437157-26437360 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 132, 0

Conread position: 3-205
Cow position: chr27:6162446-6162644 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 114, 0

Conread position: 3-205
Cow position: chr27:9977649-9977445 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 132

Conread position: 3-205
Cow position: chr27:10582337-10582130 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 122, 178

Conread position: 3-205
Cow position: chr27:11982682-11982889 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 131, 71

Conread position: 3-205
Cow position: chr27:16786793-16786590 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 138, 88

Conread position: 3-205
Cow position: chr27:20552814-20553017 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 171

Conread position: 3-205
Cow position: chr27:23527277-23527074 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 53

Conread position: 3-205
Cow position: chr27:24693377-24693177 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 3-205
Cow position: chr27:26793819-26794025 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 136, 106

Conread position: 3-209
Cow position: chr27:19557349-19557148 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 17

Conread position: 3-215
Cow position: chr27:15204265-15204487 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 3-216
Cow position: chr27:18558321-18558107 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 44

Conread position: 3-216
Cow position: chr27:22549802-22550023 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 3-218
Cow position: chr27:10307336-10307557 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 129, 53

Conread position: 3-218
Cow position: chr27:18543956-18543735 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 109

Conread position: 3-218
Cow position: chr27:29693442-29693213 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 130, 0

Conread position: 3-221
Cow position: chr27:31210511-31210292 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 134, 37

Conread position: 3-222
Cow position: chr27:30764995-30764773 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 130, 74

Conread position: 3-224
Cow position: chr27:11435358-11435586 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 91

Conread position: 3-224
Cow position: chr27:15867360-15867130 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 3-224
Cow position: chr27:21978171-21978404 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 54, 107

Conread position: 3-224
Cow position: chr27:28921930-28922156 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 15

Conread position: 3-230
Cow position: chr27:18507614-18507378 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 123, 0

Conread position: 3-231
Cow position: chr27:29991483-29991726 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 127, 0

Conread position: 3-233
Cow position: chr27:19500269-19500506 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 3-235
Cow position: chr27:12516157-12515919 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 17

Conread position: 3-237
Cow position: chr27:6330608-6330362 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 221

Conread position: 3-237
Cow position: chr27:27554716-27554951 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 74

Conread position: 3-238
Cow position: chr27:13254833-13255070 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 118, 149

Conread position: 3-238
Cow position: chr27:26226326-26226562 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 135, 98

Conread position: 4-127
Cow position: chr27:23216356-23216476 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 4-178
Cow position: chr27:19896718-19896549 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 4-185
Cow position: chr27:13318011-13318198 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 139, 0

Conread position: 4-192
Cow position: chr27:26489945-26490133 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 4-193
Cow position: chr27:23554366-23554558 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 126, 42

Conread position: 4-194
Cow position: chr27:30605661-30605467 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 123, 7

Conread position: 4-203
Cow position: chr27:12425253-12425049 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 36

Conread position: 4-203
Cow position: chr27:16512208-16512406 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 124, 151

Conread position: 4-203
Cow position: chr27:31248656-31248845 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 4-205
Cow position: chr27:6787919-6787711 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 139, 116

Conread position: 4-205
Cow position: chr27:15668808-15669015 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 4-205
Cow position: chr27:22440105-22439896 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 63, 102

Conread position: 4-217
Cow position: chr27:31151344-31151131 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 136, 116

Conread position: 4-218
Cow position: chr27:11323293-11323073 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 4-224
Cow position: chr27:10323800-10323584 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 130, 43

Conread position: 4-224
Cow position: chr27:11134047-11133826 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 25

Conread position: 4-235
Cow position: chr27:20045853-20045626 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 16

Conread position: 4-237
Cow position: chr27:26173460-26173226 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 65

Conread position: 4-241
Cow position: chr27:11480673-11480913 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 126, 146

Conread position: 4-248
Cow position: chr27:10404153-10404402 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 121, 35

Conread position: 4-252
Cow position: chr27:27740328-27740582 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 139, 75

Conread position: 4-253
Cow position: chr27:24223915-24223662 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 52

Conread position: 5-193
Cow position: chr27:22489239-22489043 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 125, 0

Conread position: 5-202
Cow position: chr27:30872097-30872295 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 126, 12

Conread position: 5-217
Cow position: chr27:20637099-20637313 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 21

Conread position: 5-228
Cow position: chr27:10598951-10598723 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 5-241
Cow position: chr27:17102858-17102621 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 209, 81

Conread position: 5-241
Cow position: chr27:20749052-20749278 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 5-253
Cow position: chr27:16284437-16284200 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 6-203
Cow position: chr27:2957366-2957178 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 6-218
Cow position: chr27:24477378-24477172 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 6-228
Cow position: chr27:27438543-27438772 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 15, 24

Conread position: 7-235
Cow position: chr27:16246767-16246538 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 129

Conread position: 7-238
Cow position: chr27:24303907-24303672 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 123, 181

Conread position: 8-205
Cow position: chr27:7346631-7346429 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 33

Conread position: 9-205
Cow position: chr27:19576365-19576564 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 134, 0

Conread position: 9-235
Cow position: chr27:23929924-23929708 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 9-239
Cow position: chr27:26400763-26400989 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 135, 0

Conread position: 10-253
Cow position: chr27:9504510-9504265 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 124, 37

Conread position: 12-203
Cow position: chr27:5539740-5539931 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 12-205
Cow position: chr27:4413863-4414056 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 27, 184

Conread position: 12-205
Cow position: chr27:28931847-28932043 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 115, 26

Conread position: 12-205
Cow position: chr27:29892684-29892481 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 12-218
Cow position: chr27:4486821-4487035 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 22

Conread position: 12-229
Cow position: chr27:18791554-18791779 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 13-170
Cow position: chr27:27747511-27747674 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 13-205
Cow position: chr27:18688455-18688653 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 115, 0

Conread position: 14-179
Cow position: chr27:1184224-1184390 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 14-204
Cow position: chr27:13801762-13801565 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 25

Conread position: 14-224
Cow position: chr27:26236279-26236073 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 63

Conread position: 15-193
Cow position: chr27:232506-232322 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 115, 0

Conread position: 16-203
Cow position: chr27:12284945-12284755 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 31

Conread position: 16-205
Cow position: chr27:20484681-20484492 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 16-205
Cow position: chr27:27827900-27828097 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 108, 8

Conread position: 16-218
Cow position: chr27:27449934-27450138 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 119, 0

Conread position: 16-235
Cow position: chr27:29308294-29308075 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 100, 34

Conread position: 18-251
Cow position: chr27:16965527-16965289 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 7

Conread position: 20-205
Cow position: chr27:26980014-26980206 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 20-205
Cow position: chr27:27389077-27389268 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 5

Conread position: 22-193
Cow position: chr27:26909646-26909817 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 144
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 22-205
Cow position: chr27:11208609-11208798 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 110, 0

Conread position: 23-236
Cow position: chr27:30444734-30444944 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 17, 131

Conread position: 24-204
Cow position: chr27:22792775-22792599 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 103

Conread position: 24-223
Cow position: chr27:23941005-23941214 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 24-224
Cow position: chr27:21677481-21677692 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 24-235
Cow position: chr27:28015789-28016006 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 6, 24

Conread position: 25-177
Cow position: chr27:14005352-14005203 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 25-204
Cow position: chr27:6282776-6282593 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 25-204
Cow position: chr27:19933011-19932826 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 25-204
Cow position: chr27:20048576-20048397 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 25-204
Cow position: chr27:27020155-27020335 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 115, 148

Conread position: 25-209
Cow position: chr27:31157754-31157565 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 109, 85

Conread position: 25-218
Cow position: chr27:6679432-6679634 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 118, 148

Conread position: 25-218
Cow position: chr27:18646211-18646403 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 25-218
Cow position: chr27:19668865-19669059 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 52

Conread position: 25-220
Cow position: chr27:14472241-14472434 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 103, 46

Conread position: 25-222
Cow position: chr27:11349218-11349026 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 180, 23

Conread position: 25-223
Cow position: chr27:28254180-28253975 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 52

Conread position: 25-231
Cow position: chr27:29249534-29249315 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 141

Conread position: 25-233
Cow position: chr27:26314181-26314394 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 106, 85

Conread position: 25-240
Cow position: chr27:14443556-14443347 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 25-242
Cow position: chr27:9338041-9338259 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 49

Conread position: 26-191
Cow position: chr27:24755929-24755764 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 26-193
Cow position: chr27:13236493-13236669 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 26-201
Cow position: chr27:30694266-30694447 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 26-202
Cow position: chr27:2012131-2012313 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 26-203
Cow position: chr27:21991087-21990904 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 97

Conread position: 26-204
Cow position: chr27:18031134-18031310 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 26-205
Cow position: chr27:26118441-26118256 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 96, 0

Conread position: 26-221
Cow position: chr27:31515608-31515810 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 26-222
Cow position: chr27:20127356-20127554 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 185

Conread position: 26-230
Cow position: chr27:20591870-20591664 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 48

Conread position: 26-231
Cow position: chr27:17995002-17995213 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 117, 180

Conread position: 27-222
Cow position: chr27:13204399-13204206 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 178, 23

Conread position: 27-253
Cow position: chr27:19741468-19741680 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 28-170
Cow position: chr27:18491495-18491352 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 114, 88

Conread position: 28-178
Cow position: chr27:18912584-18912735 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 28-193
Cow position: chr27:30996889-30997058 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 83

Conread position: 28-203
Cow position: chr27:21951039-21951219 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 28-205
Cow position: chr27:20266286-20266467 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 115, 152

Conread position: 28-219
Cow position: chr27:31157969-31157770 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 28-223
Cow position: chr27:9956492-9956694 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 28-241
Cow position: chr27:26940018-26939797 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 34

Conread position: 29-238
Cow position: chr27:4544410-4544626 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 31-204
Cow position: chr27:29246215-29246384 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 108, 12

Conread position: 31-205
Cow position: chr27:26087252-26087079 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 149

Conread position: 31-218
Cow position: chr27:16275739-16275934 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 31-224
Cow position: chr27:2949391-2949575 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 31-226
Cow position: chr27:11464494-11464696 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 31-226
Cow position: chr27:31498719-31498519 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 79

Conread position: 32-184
Cow position: chr27:23060178-23060336 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 32-220
Cow position: chr27:22497957-22497772 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 79

Conread position: 32-221
Cow position: chr27:17908324-17908513 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 48

Conread position: 32-266
Cow position: chr27:21202128-21201896 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 160

Conread position: 33-185
Cow position: chr27:22254729-22254569 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 104, 10

Conread position: 33-195
Cow position: chr27:1190539-1190707 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 33-241
Cow position: chr27:24358267-24358059 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 172, 44

Conread position: 34-224
Cow position: chr27:21419258-21419444 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 166, 11

Conread position: 34-234
Cow position: chr27:26984095-26983892 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 0

Conread position: 35-141
Cow position: chr27:11940294-11940400 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 35-193
Cow position: chr27:23177380-23177541 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 36-181
Cow position: chr27:23477877-23477731 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 66

Conread position: 36-229
Cow position: chr27:23232847-23232648 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 182

Conread position: 37-204
Cow position: chr27:23760048-23760218 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 37-205
Cow position: chr27:20283566-20283403 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 37-224
Cow position: chr27:31035065-31034874 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 85

Conread position: 38-205
Cow position: chr27:31153628-31153796 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 39, 87

Conread position: 39-205
Cow position: chr27:11145807-11145641 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 70

Conread position: 40-184
Cow position: chr27:23930710-23930857 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 24

Conread position: 41-213
Cow position: chr27:28476187-28476357 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 43-205
Cow position: chr27:29614966-29614801 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 43-213
Cow position: chr27:178787-178614 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 47-205
Cow position: chr27:2036640-2036485 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 47-219
Cow position: chr27:29597827-29598000 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 105

Conread position: 47-237
Cow position: chr27:22583667-22583469 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 47-251
Cow position: chr27:18873968-18873765 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 183, 127

Conread position: 47-264
Cow position: chr27:10581453-10581235 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 87, 27

Conread position: 50-205
Cow position: chr27:19074105-19074264 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 40

Conread position: 50-220
Cow position: chr27:19779794-19779621 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 86, 142

Conread position: 51-203
Cow position: chr27:68142-67998 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 51-218
Cow position: chr27:19805780-19805950 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 31

Conread position: 53-204
Cow position: chr27:672581-672424 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 26

Conread position: 53-227
Cow position: chr27:16504996-16505169 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 55-203
Cow position: chr27:26154233-26154078 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 57-224
Cow position: chr27:29877563-29877737 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 58-220
Cow position: chr27:29816719-29816886 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 5

Conread position: 59-177
Cow position: chr27:26317974-26317850 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 59-205
Cow position: chr27:20561490-20561347 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 59-233
Cow position: chr27:21101382-21101562 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 63

Conread position: 64-170
Cow position: chr27:18867911-18868017 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 64-184
Cow position: chr27:624315-624436 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 22

Conread position: 64-218
Cow position: chr27:21054363-21054202 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 64-232
Cow position: chr27:27012602-27012427 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 67, 164

Conread position: 64-241
Cow position: chr27:1778952-1779125 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 71

Conread position: 65-235
Cow position: chr27:30004740-30004913 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 67-222
Cow position: chr27:26467658-26467822 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 69-224
Cow position: chr27:29399502-29399350 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 83-237
Cow position: chr27:24952070-24952226 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 90

Conread position: 97-219
Cow position: chr27:29056176-29056055 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.