Cow genome map
Conread name: | Emb1-C0005183_C04 |
Conread position: | 1-130 |
Cow position: | chr12:33976136-33976271 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 1-157 |
Cow position: | chr12:41474026-41474187 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 26, 146 |
Conread position: | 1-177 |
Cow position: | chr12:29779977-29779790 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 28, 177 |
Conread position: | 1-205 |
Cow position: | chr12:7110134-7110337 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 150 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 30, 141 |
Conread position: | 2-130 |
Cow position: | chr12:3615940-3616069 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 2-130 |
Cow position: | chr12:34161352-34161485 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 108 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 2-130 |
Cow position: | chr12:47804095-47804228 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 27, 85 |
Conread position: | 2-137 |
Cow position: | chr12:24211351-24211487 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 104 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 41, 31 |
Conread position: | 2-138 |
Cow position: | chr12:31429630-31429489 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 118 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 2-151 |
Cow position: | chr12:26217887-26217731 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 121 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 2-151 |
Cow position: | chr12:48415574-48415424 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 26, 136 |
Conread position: | 2-153 |
Cow position: | chr12:6410797-6410638 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 2-153 |
Cow position: | chr12:35368580-35368740 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 2-154 |
Cow position: | chr12:4341806-4341649 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 31, 140 |
Conread position: | 2-154 |
Cow position: | chr12:42966938-42967087 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 33, 47 |
Conread position: | 2-155 |
Cow position: | chr12:6241257-6241415 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 145 |
Conread position: | 2-155 |
Cow position: | chr12:29675200-29675048 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 31, 139 |
Conread position: | 2-155 |
Cow position: | chr12:29966045-29966196 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 56 |
Conread position: | 2-155 |
Cow position: | chr12:30919363-30919521 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 32, 145 |
Conread position: | 2-155 |
Cow position: | chr12:33323558-33323399 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 29, 141 |
Conread position: | 2-155 |
Cow position: | chr12:35771083-35770925 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 27, 145 |
Conread position: | 2-155 |
Cow position: | chr12:41159528-41159683 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 20, 58 |
Conread position: | 2-174 |
Cow position: | chr12:18572568-18572739 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 170, 117 |
Conread position: | 2-175 |
Cow position: | chr12:4793135-4793316 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 31, 140 |
Conread position: | 2-191 |
Cow position: | chr12:4797238-4797433 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 146 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 27, 136 |
Conread position: | 2-198 |
Cow position: | chr12:46120896-46120693 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 145 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 26, 148 |
Conread position: | 2-205 |
Cow position: | chr12:7000665-7000454 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 27, 84 |
Conread position: | 2-205 |
Cow position: | chr12:23764432-23764628 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 143 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 59, 31 |
Conread position: | 2-205 |
Cow position: | chr12:42698297-42698104 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 151 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 2-214 |
Cow position: | chr12:45168081-45167867 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 159 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 27, 117 |
Conread position: | 2-218 |
Cow position: | chr12:5800979-5801198 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 156 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 20, 145 |
Conread position: | 2-223 |
Cow position: | chr12:3880042-3879811 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 172 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 27, 184 |
Conread position: | 3-130 |
Cow position: | chr12:9229561-9229428 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 111 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 3-137 |
Cow position: | chr12:3197208-3197347 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 3-137 |
Cow position: | chr12:37008764-37008628 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 3-198 |
Cow position: | chr12:3675588-3675391 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 140 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 27, 107 |
Conread position: | 4-142 |
Cow position: | chr12:30210423-30210567 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 4-164 |
Cow position: | chr12:23836271-23836437 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 30, 52 |
Conread position: | 4-191 |
Cow position: | chr12:29969519-29969710 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 141 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 27, 152 |
Conread position: | 5-128 |
Cow position: | chr12:1889636-1889508 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 5-130 |
Cow position: | chr12:31517230-31517099 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 5-155 |
Cow position: | chr12:5635512-5635357 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 23, 142 |
Conread position: | 6-130 |
Cow position: | chr12:27803108-27802978 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 6-154 |
Cow position: | chr12:4866759-4866912 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 124 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 23, 141 |
Conread position: | 7-151 |
Cow position: | chr12:29057332-29057483 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 7-154 |
Cow position: | chr12:25441591-25441736 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 108 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 7-155 |
Cow position: | chr12:42181186-42181033 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 22, 140 |
Conread position: | 8-223 |
Cow position: | chr12:7920186-7920405 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 21, 154 |
Conread position: | 18-151 |
Cow position: | chr12:6958181-6958314 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 98, 15 |
Conread position: | 19-130 |
Cow position: | chr12:38804630-38804518 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 22-174 |
Cow position: | chr12:40270100-40269950 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 145, 26 |
Conread position: | 22-240 |
Cow position: | chr12:6226180-6225958 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 158 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 117, 37 |
Conread position: | 27-153 |
Cow position: | chr12:30753689-30753813 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 27-155 |
Cow position: | chr12:26357402-26357276 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 28-156 |
Cow position: | chr12:1344715-1344843 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 28-179 |
Cow position: | chr12:33319698-33319547 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 112 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 139, 113 |
Conread position: | 29-177 |
Cow position: | chr12:27572269-27572123 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 138, 107 |
Conread position: | 30-148 |
Cow position: | chr12:46103734-46103618 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 30-205 |
Cow position: | chr12:18523539-18523718 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 17, 6 |
Conread position: | 31-137 |
Cow position: | chr12:43854867-43854972 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 87 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 31-154 |
Cow position: | chr12:18996783-18996905 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 95 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 31-166 |
Cow position: | chr12:25456381-25456517 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 19, 112 |
Conread position: | 31-177 |
Cow position: | chr12:32419398-32419255 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 99, 23 |
Conread position: | 31-199 |
Cow position: | chr12:42143133-42143304 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 109, 24 |
Conread position: | 31-224 |
Cow position: | chr12:28651086-28651281 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 142 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 136, 110 |
Conread position: | 33-198 |
Cow position: | chr12:25444889-25445060 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 33-205 |
Cow position: | chr12:27430481-27430649 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 126 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 34-176 |
Cow position: | chr12:23913036-23912893 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 5, 135 |
Conread position: | 40-198 |
Cow position: | chr12:22341228-22341382 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 115 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 41-139 |
Cow position: | chr12:18130500-18130597 (view UCSC Genome Browser custom track) |
Alignm length: | 99 |
Alignm identity: | 82 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 46-177 |
Cow position: | chr12:15790046-15790175 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 46-224 |
Cow position: | chr12:4962622-4962797 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 128 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 121, 93 |
Conread position: | 76-176 |
Cow position: | chr12:34459678-34459780 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 85 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.