Cow genome map
Conread name: | Emb1-C0005183_C04 |
Conread position: | 1-130 |
Cow position: | chr15:19950586-19950458 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 1-147 |
Cow position: | chr15:49922248-49922097 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 28, 141 |
Conread position: | 1-170 |
Cow position: | chr15:20487089-20487263 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 132 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 30, 146 |
Conread position: | 1-198 |
Cow position: | chr15:23719369-23719575 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 1-227 |
Cow position: | chr15:5726439-5726211 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 170 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 28, 145 |
Conread position: | 2-128 |
Cow position: | chr15:16603932-16603806 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 108 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-130 |
Cow position: | chr15:794908-795043 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 2-130 |
Cow position: | chr15:40537903-40538031 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-133 |
Cow position: | chr15:662355-662492 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 2-136 |
Cow position: | chr15:7192153-7192289 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 103 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 2-136 |
Cow position: | chr15:10660441-10660582 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 2-137 |
Cow position: | chr15:21821811-21821952 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 2-150 |
Cow position: | chr15:14176386-14176539 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 123 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 29, 140 |
Conread position: | 2-150 |
Cow position: | chr15:26158486-26158636 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 31, 50 |
Conread position: | 2-150 |
Cow position: | chr15:31495111-31495263 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 27, 144 |
Conread position: | 2-153 |
Cow position: | chr15:31928783-31928941 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 127 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 2-155 |
Cow position: | chr15:5683253-5683105 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 26, 84 |
Conread position: | 2-155 |
Cow position: | chr15:11995914-11996070 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 120 |
Conread position: | 2-155 |
Cow position: | chr15:16583583-16583735 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 29, 111 |
Conread position: | 2-155 |
Cow position: | chr15:22939212-22939370 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 126 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 29, 145 |
Conread position: | 2-155 |
Cow position: | chr15:27900398-27900555 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 32, 139 |
Conread position: | 2-155 |
Cow position: | chr15:36388404-36388246 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 27, 136 |
Conread position: | 2-159 |
Cow position: | chr15:5930006-5929848 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 29, 17 |
Conread position: | 2-174 |
Cow position: | chr15:6272777-6272950 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 26, 79 |
Conread position: | 2-175 |
Cow position: | chr15:12870751-12870932 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 27, 173 |
Conread position: | 2-176 |
Cow position: | chr15:21389054-21389230 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 26, 58 |
Conread position: | 2-176 |
Cow position: | chr15:22871722-22871547 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 130 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 33, 89 |
Conread position: | 2-176 |
Cow position: | chr15:39316729-39316911 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 2-179 |
Cow position: | chr15:14261146-14261327 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 138 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 29, 169 |
Conread position: | 2-184 |
Cow position: | chr15:29331113-29330932 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 2-198 |
Cow position: | chr15:50660737-50660530 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 146 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 26, 175 |
Conread position: | 2-201 |
Cow position: | chr15:35440969-35441168 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 147 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 33, 136 |
Conread position: | 2-205 |
Cow position: | chr15:2141190-2141400 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 158 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 27, 142 |
Conread position: | 2-206 |
Cow position: | chr15:34207081-34207283 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 142 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 165, 31 |
Conread position: | 2-222 |
Cow position: | chr15:33625064-33624839 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 159 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 128, 144 |
Conread position: | 2-223 |
Cow position: | chr15:22136796-22136571 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 154 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 136, 31 |
Conread position: | 3-142 |
Cow position: | chr15:14020597-14020451 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 116 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 3-151 |
Cow position: | chr15:26919163-26919318 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-153 |
Cow position: | chr15:34284298-34284454 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 27, 145 |
Conread position: | 3-155 |
Cow position: | chr15:6128854-6129010 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 59 |
Conread position: | 3-165 |
Cow position: | chr15:35945641-35945470 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 130 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 26, 112 |
Conread position: | 3-194 |
Cow position: | chr15:44280214-44280012 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 147 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 3-223 |
Cow position: | chr15:29604588-29604814 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 166 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 25, 130 |
Conread position: | 4-150 |
Cow position: | chr15:15154411-15154261 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 25, 109 |
Conread position: | 4-154 |
Cow position: | chr15:48590134-48590288 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 25, 38 |
Conread position: | 4-155 |
Cow position: | chr15:31637412-31637253 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 4-155 |
Cow position: | chr15:39621449-39621291 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 4-191 |
Cow position: | chr15:51632952-51633137 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 141 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 22, 54 |
Conread position: | 4-198 |
Cow position: | chr15:21803550-21803737 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 145 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 27, 48 |
Conread position: | 4-198 |
Cow position: | chr15:22984685-22984496 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 146 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 31, 101 |
Conread position: | 4-207 |
Cow position: | chr15:31025103-31024894 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 152 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 30, 168 |
Conread position: | 4-223 |
Cow position: | chr15:286589-286376 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 27, 138 |
Conread position: | 5-130 |
Cow position: | chr15:27973107-27973239 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 5-147 |
Cow position: | chr15:26530000-26529851 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 5-190 |
Cow position: | chr15:5567034-5566848 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 26, 81 |
Conread position: | 6-140 |
Cow position: | chr15:41582989-41582851 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 22, 119 |
Conread position: | 6-148 |
Cow position: | chr15:5234892-5235035 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 107 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 29, 137 |
Conread position: | 6-154 |
Cow position: | chr15:32977737-32977889 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 23, 136 |
Conread position: | 6-198 |
Cow position: | chr15:18776642-18776843 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 144 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 7-207 |
Cow position: | chr15:42190544-42190348 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 160, 17 |
Conread position: | 22-179 |
Cow position: | chr15:16911578-16911730 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 24-137 |
Cow position: | chr15:12332559-12332445 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 27-155 |
Cow position: | chr15:20459226-20459353 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 27-165 |
Cow position: | chr15:12357699-12357560 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 100, 116 |
Conread position: | 27-184 |
Cow position: | chr15:10431895-10431737 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 115 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 28-152 |
Cow position: | chr15:28823738-28823859 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 28-157 |
Cow position: | chr15:4500784-4500656 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 100 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 29-137 |
Cow position: | chr15:9497420-9497528 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 86 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-179 |
Cow position: | chr15:42789068-42789219 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 110, 139 |
Conread position: | 31-130 |
Cow position: | chr15:40309469-40309371 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 83 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 31-147 |
Cow position: | chr15:1297817-1297700 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 31-154 |
Cow position: | chr15:52432421-52432299 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 95 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 31-171 |
Cow position: | chr15:13554431-13554292 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 125, 101 |
Conread position: | 33-130 |
Cow position: | chr15:43599265-43599168 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 82 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 33-154 |
Cow position: | chr15:4485230-4485107 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 95 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 34-130 |
Cow position: | chr15:23776546-23776642 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 84 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 5, 84 |
Conread position: | 39-198 |
Cow position: | chr15:33976625-33976790 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 43-198 |
Cow position: | chr15:10074025-10073881 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 43-234 |
Cow position: | chr15:23927816-23928005 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 137 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 136, 96 |
Show alignments to all cow chromosomes.