Cow genome map

Conread name: Emb1-C0005183_C04

Conread position: 1-153
Cow position: chr22:44684466-44684614 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-176
Cow position: chr22:3950224-3950407 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 73

Conread position: 1-177
Cow position: chr22:13841112-13841294 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 1-198
Cow position: chr22:24802728-24802532 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 134

Conread position: 1-199
Cow position: chr22:27047434-27047237 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 130, 32

Conread position: 1-205
Cow position: chr22:13878153-13878366 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 58

Conread position: 2-119
Cow position: chr22:21205303-21205420 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 76

Conread position: 2-130
Cow position: chr22:28058078-28057943 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 2-130
Cow position: chr22:35029242-35029375 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 85

Conread position: 2-130
Cow position: chr22:45846116-45846248 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 75

Conread position: 2-132
Cow position: chr22:19047842-19047707 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 67

Conread position: 2-137
Cow position: chr22:8090555-8090418 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 2-147
Cow position: chr22:877488-877642 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 2-147
Cow position: chr22:12968096-12967945 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 146

Conread position: 2-148
Cow position: chr22:534472-534623 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 145

Conread position: 2-151
Cow position: chr22:14372152-14372297 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 2-152
Cow position: chr22:23372891-23372738 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 127

Conread position: 2-153
Cow position: chr22:11130843-11130999 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 140

Conread position: 2-154
Cow position: chr22:8412499-8412659 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 2-155
Cow position: chr22:10553712-10553556 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 143

Conread position: 2-155
Cow position: chr22:12678449-12678291 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 145

Conread position: 2-155
Cow position: chr22:47555824-47555981 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 2-156
Cow position: chr22:530596-530446 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 2-159
Cow position: chr22:7832381-7832218 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 136

Conread position: 2-162
Cow position: chr22:12315784-12315947 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 85

Conread position: 2-163
Cow position: chr22:2502799-2502967 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 27, 51

Conread position: 2-167
Cow position: chr22:18926329-18926496 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 143

Conread position: 2-174
Cow position: chr22:28704157-28704335 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 148

Conread position: 2-176
Cow position: chr22:22155578-22155758 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 114

Conread position: 2-191
Cow position: chr22:31153926-31154124 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 193

Conread position: 2-197
Cow position: chr22:27328919-27328719 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 144

Conread position: 2-198
Cow position: chr22:14690998-14690801 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 140

Conread position: 2-198
Cow position: chr22:16044443-16044241 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 140

Conread position: 2-205
Cow position: chr22:3965159-3965373 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 2-205
Cow position: chr22:24611119-24610914 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 84

Conread position: 2-205
Cow position: chr22:26339727-26339928 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 118

Conread position: 2-217
Cow position: chr22:32895193-32895411 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 31

Conread position: 2-223
Cow position: chr22:6326417-6326649 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 17

Conread position: 3-130
Cow position: chr22:28672119-28672252 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 3-137
Cow position: chr22:29955024-29954893 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 3-147
Cow position: chr22:23857020-23857170 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 3-153
Cow position: chr22:15490627-15490785 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 4-148
Cow position: chr22:10285943-10286094 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 106

Conread position: 4-154
Cow position: chr22:12195592-12195437 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 4-191
Cow position: chr22:23176466-23176272 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 163

Conread position: 4-192
Cow position: chr22:5384630-5384820 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 82

Conread position: 4-198
Cow position: chr22:26122872-26123075 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 134

Conread position: 4-205
Cow position: chr22:27274723-27274525 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 141

Conread position: 4-216
Cow position: chr22:28665258-28665477 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 171

Conread position: 5-157
Cow position: chr22:37029628-37029477 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 54

Conread position: 5-216
Cow position: chr22:10752566-10752344 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 202

Conread position: 5-223
Cow position: chr22:44384518-44384310 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 8-170
Cow position: chr22:21530374-21530212 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 11

Conread position: 15-137
Cow position: chr22:13004352-13004472 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 17-121
Cow position: chr22:4026812-4026920 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 21-130
Cow position: chr22:30687025-30687133 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 22-211
Cow position: chr22:34750674-34750863 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 50

Conread position: 23-206
Cow position: chr22:21215712-21215899 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 27-177
Cow position: chr22:17814237-17814383 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 27-197
Cow position: chr22:26490506-26490689 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 6

Conread position: 29-130
Cow position: chr22:14509471-14509370 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 31-154
Cow position: chr22:28120732-28120854 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 31-190
Cow position: chr22:17294928-17294769 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 101

Conread position: 33-153
Cow position: chr22:10402936-10402818 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 33-165
Cow position: chr22:3997763-3997896 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 34-177
Cow position: chr22:2516896-2516752 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 128

Conread position: 34-198
Cow position: chr22:31064414-31064573 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 37

Conread position: 40-155
Cow position: chr22:1320511-1320625 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 41-155
Cow position: chr22:38815181-38815071 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 0

Show alignments to all cow chromosomes.