Cow genome map
| Conread name: | Emb1-C0005183_C04 |
| Conread position: | 1-137 |
| Cow position: | chr24:33723891-33723752 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-152 |
| Cow position: | chr24:29679359-29679204 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 1-177 |
| Cow position: | chr24:33465667-33465489 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 1-198 |
| Cow position: | chr24:39905503-39905289 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-203 |
| Cow position: | chr24:16118311-16118515 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 134 |
| Conread position: | 2-130 |
| Cow position: | chr24:43832481-43832616 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-153 |
| Cow position: | chr24:39523497-39523341 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 2-154 |
| Cow position: | chr24:27290823-27290982 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-155 |
| Cow position: | chr24:18741620-18741462 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 145 |
| Conread position: | 2-155 |
| Cow position: | chr24:19769441-19769605 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 151 |
| Conread position: | 2-155 |
| Cow position: | chr24:34008621-34008461 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-155 |
| Cow position: | chr24:41405842-41406004 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 149 |
| Conread position: | 2-164 |
| Cow position: | chr24:29673474-29673641 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 2-198 |
| Cow position: | chr24:18614953-18615153 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 2-205 |
| Cow position: | chr24:28470728-28470522 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 2-206 |
| Cow position: | chr24:28289301-28289087 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 127 |
| Conread position: | 2-222 |
| Cow position: | chr24:26848772-26848559 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 208, 17 |
| Conread position: | 2-227 |
| Cow position: | chr24:24457298-24457073 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 2-232 |
| Cow position: | chr24:18970557-18970322 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 146 |
| Conread position: | 3-130 |
| Cow position: | chr24:29389184-29389320 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-207 |
| Cow position: | chr24:18331671-18331891 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-211 |
| Cow position: | chr24:32204841-32204635 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 138 |
| Conread position: | 4-205 |
| Cow position: | chr24:32739308-32739120 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 163, 28 |
| Conread position: | 9-137 |
| Cow position: | chr24:16509943-16510070 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-201 |
| Cow position: | chr24:11119260-11119431 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 140, 112 |
| Conread position: | 27-205 |
| Cow position: | chr24:15373388-15373571 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 103, 116 |
| Conread position: | 27-263 |
| Cow position: | chr24:22235450-22235679 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 169, 109 |
| Conread position: | 29-154 |
| Cow position: | chr24:39806766-39806892 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 102 |
| Conread position: | 30-155 |
| Cow position: | chr24:34742739-34742865 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 30-177 |
| Cow position: | chr24:40983117-40983265 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 31-151 |
| Cow position: | chr24:32891057-32890938 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 31-153 |
| Cow position: | chr24:28024266-28024387 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 31-179 |
| Cow position: | chr24:30202811-30202959 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 108, 83 |
| Conread position: | 31-184 |
| Cow position: | chr24:41068247-41068399 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 31-222 |
| Cow position: | chr24:32818313-32818123 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 33-153 |
| Cow position: | chr24:37453515-37453397 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 33-167 |
| Cow position: | chr24:14786368-14786501 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 34-152 |
| Cow position: | chr24:256016-256133 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 38-155 |
| Cow position: | chr24:39218558-39218440 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 39-205 |
| Cow position: | chr24:18313939-18313774 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 43-205 |
| Cow position: | chr24:43024259-43024424 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 98 |
| Conread position: | 54-192 |
| Cow position: | chr24:10840910-10840774 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.