Cow genome map
| Conread name: | Emb1-C0005183_C04 |
| Conread position: | 1-151 |
| Cow position: | chr27:18435152-18435307 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 146 |
| Conread position: | 1-165 |
| Cow position: | chr27:30908653-30908486 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 28, 86 |
| Conread position: | 1-177 |
| Cow position: | chr27:27673035-27673218 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-198 |
| Cow position: | chr27:6550440-6550250 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 2-130 |
| Cow position: | chr27:22245606-22245473 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 2-153 |
| Cow position: | chr27:7935176-7935335 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-153 |
| Cow position: | chr27:31386650-31386807 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 2-154 |
| Cow position: | chr27:18593249-18593094 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 2-155 |
| Cow position: | chr27:11561756-11561599 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 136 |
| Conread position: | 2-155 |
| Cow position: | chr27:16965552-16965397 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 31 |
| Conread position: | 2-155 |
| Cow position: | chr27:27641032-27641188 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 2-157 |
| Cow position: | chr27:17918333-17918494 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 159 |
| Conread position: | 2-177 |
| Cow position: | chr27:30359387-30359200 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-130 |
| Cow position: | chr27:12246632-12246500 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 3-137 |
| Cow position: | chr27:12278279-12278404 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 3-151 |
| Cow position: | chr27:22423495-22423343 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 3-155 |
| Cow position: | chr27:31017850-31018005 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 3-179 |
| Cow position: | chr27:29319390-29319211 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 4-133 |
| Cow position: | chr27:19543942-19544078 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 4-142 |
| Cow position: | chr27:12191501-12191645 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 4-152 |
| Cow position: | chr27:20812883-20812732 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 141 |
| Conread position: | 4-154 |
| Cow position: | chr27:1789161-1789315 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 133 |
| Conread position: | 4-205 |
| Cow position: | chr27:22454797-22455004 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 5-155 |
| Cow position: | chr27:7731280-7731431 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 7-146 |
| Cow position: | chr27:16705226-16705082 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 140 |
| Conread position: | 23-137 |
| Cow position: | chr27:27255941-27255827 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-200 |
| Cow position: | chr27:19756046-19755876 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 159, 111 |
| Conread position: | 29-198 |
| Cow position: | chr27:30489463-30489632 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 138, 112 |
| Conread position: | 31-155 |
| Cow position: | chr27:19660877-19660755 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 31-177 |
| Cow position: | chr27:17918772-17918919 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 108, 124 |
| Conread position: | 31-177 |
| Cow position: | chr27:22723748-22723893 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 136, 101 |
| Conread position: | 31-205 |
| Cow position: | chr27:28541167-28541346 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 114, 101 |
| Conread position: | 32-153 |
| Cow position: | chr27:14169344-14169224 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 33-174 |
| Cow position: | chr27:22153802-22153661 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 105 |
| Conread position: | 33-177 |
| Cow position: | chr27:29658772-29658915 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 134, 54 |
| Conread position: | 33-217 |
| Cow position: | chr27:19452945-19452755 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 125 |
| Conread position: | 34-158 |
| Cow position: | chr27:6522759-6522635 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 38-137 |
| Cow position: | chr27:18491494-18491396 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 41-147 |
| Cow position: | chr27:22497957-22497851 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 101 |
Show alignments to all cow chromosomes.