Cow genome map
| Conread name: | Emb1-C0005183_C04 |
| Conread position: | 1-130 |
| Cow position: | chr28:7008998-7008863 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-154 |
| Cow position: | chr28:6059490-6059328 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-198 |
| Cow position: | chr28:2752514-2752308 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-198 |
| Cow position: | chr28:2898969-2899164 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 144 |
| Conread position: | 2-130 |
| Cow position: | chr28:4765655-4765791 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-130 |
| Cow position: | chr28:7156818-7156952 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-130 |
| Cow position: | chr28:21598271-21598135 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-130 |
| Cow position: | chr28:22571681-22571553 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-130 |
| Cow position: | chr28:23007749-23007615 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-137 |
| Cow position: | chr28:5144540-5144399 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-137 |
| Cow position: | chr28:26719324-26719465 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-148 |
| Cow position: | chr28:25249335-25249486 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 2-152 |
| Cow position: | chr28:555485-555642 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 147 |
| Conread position: | 2-152 |
| Cow position: | chr28:22321408-22321556 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 2-155 |
| Cow position: | chr28:7697997-7697845 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 139 |
| Conread position: | 2-155 |
| Cow position: | chr28:8149651-8149491 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-155 |
| Cow position: | chr28:24706878-24707038 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-164 |
| Cow position: | chr28:19222169-19222004 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 137 |
| Conread position: | 2-165 |
| Cow position: | chr28:27161345-27161178 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 2-168 |
| Cow position: | chr28:32174610-32174781 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 2-176 |
| Cow position: | chr28:7388786-7388613 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 2-221 |
| Cow position: | chr28:26743607-26743819 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 2-222 |
| Cow position: | chr28:8147882-8147659 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 2-229 |
| Cow position: | chr28:33052016-33052258 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 125 |
| Conread position: | 3-130 |
| Cow position: | chr28:26372724-26372852 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 3-137 |
| Cow position: | chr28:4881258-4881118 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 3-214 |
| Cow position: | chr28:18770066-18770271 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 4-153 |
| Cow position: | chr28:20397387-20397230 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 4-178 |
| Cow position: | chr28:25677359-25677181 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 139 |
| Conread position: | 5-152 |
| Cow position: | chr28:20313261-20313415 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 5-214 |
| Cow position: | chr28:5867711-5867924 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 169 |
| Conread position: | 7-137 |
| Cow position: | chr28:1632666-1632535 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 7-191 |
| Cow position: | chr28:6971355-6971170 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 131, 12 |
| Conread position: | 7-207 |
| Cow position: | chr28:32179683-32179884 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 10-154 |
| Cow position: | chr28:19039022-19038879 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 129, 16 |
| Conread position: | 23-205 |
| Cow position: | chr28:9418958-9418776 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 126, 118 |
| Conread position: | 27-153 |
| Cow position: | chr28:26530854-26530729 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 29-177 |
| Cow position: | chr28:8102931-8102781 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 29-178 |
| Cow position: | chr28:31876806-31876664 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 29-230 |
| Cow position: | chr28:7372108-7371909 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 183, 107 |
| Conread position: | 30-150 |
| Cow position: | chr28:6053286-6053405 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 31-142 |
| Cow position: | chr28:16691939-16692050 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-176 |
| Cow position: | chr28:2743097-2743243 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 105, 111 |
| Conread position: | 31-191 |
| Cow position: | chr28:12385277-12385112 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 31-223 |
| Cow position: | chr28:29042038-29041844 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 100, 150 |
| Conread position: | 31-230 |
| Cow position: | chr28:11365511-11365311 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 85 |
| Conread position: | 41-197 |
| Cow position: | chr28:8258850-8259007 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 95 |
Show alignments to all cow chromosomes.