Cow genome map
| Conread name: | Emb1-C0005183_C04 | 
| Conread position: | 1-130 | 
| Cow position: | chr3:11229414-11229279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 1-130 | 
| Cow position: | chr3:18686857-18686992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 1-139 | 
| Cow position: | chr3:82386778-82386642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 33, 54 | 
| Conread position: | 1-155 | 
| Cow position: | chr3:15443777-15443619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 28, 140 | 
| Conread position: | 1-155 | 
| Cow position: | chr3:48900381-48900223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 30, 56 | 
| Conread position: | 1-164 | 
| Cow position: | chr3:58317997-58317827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 1-169 | 
| Cow position: | chr3:70401848-70402028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 30, 66 | 
| Conread position: | 1-227 | 
| Cow position: | chr3:67930232-67930001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 30, 59 | 
| Conread position: | 2-121 | 
| Cow position: | chr3:81277516-81277391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 2-124 | 
| Cow position: | chr3:65413326-65413198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 2-130 | 
| Cow position: | chr3:55010209-55010079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 2-130 | 
| Cow position: | chr3:71231348-71231481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 27, 71 | 
| Conread position: | 2-137 | 
| Cow position: | chr3:4050148-4050286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 2-137 | 
| Cow position: | chr3:53739233-53739092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 2-145 | 
| Cow position: | chr3:11606266-11606421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 2-148 | 
| Cow position: | chr3:20841921-20841768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 2-148 | 
| Cow position: | chr3:71423599-71423452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 32, 141 | 
| Conread position: | 2-148 | 
| Cow position: | chr3:76387649-76387507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 16, 32 | 
| Conread position: | 2-150 | 
| Cow position: | chr3:83215214-83215367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 27, 145 | 
| Conread position: | 2-151 | 
| Cow position: | chr3:69650937-69650783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 33, 140 | 
| Conread position: | 2-152 | 
| Cow position: | chr3:21641940-21642092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 31, 59 | 
| Conread position: | 2-153 | 
| Cow position: | chr3:65236976-65237132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 27, 145 | 
| Conread position: | 2-153 | 
| Cow position: | chr3:73708999-73709156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 29, 123 | 
| Conread position: | 2-154 | 
| Cow position: | chr3:53046707-53046554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 33, 142 | 
| Conread position: | 2-154 | 
| Cow position: | chr3:59474074-59474232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 27, 143 | 
| Conread position: | 2-154 | 
| Cow position: | chr3:59621696-59621539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 25, 145 | 
| Conread position: | 2-154 | 
| Cow position: | chr3:71497186-71497029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 28, 140 | 
| Conread position: | 2-155 | 
| Cow position: | chr3:4319663-4319820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 29, 138 | 
| Conread position: | 2-155 | 
| Cow position: | chr3:15751760-15751605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 26, 126 | 
| Conread position: | 2-155 | 
| Cow position: | chr3:64010857-64010703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 26, 103 | 
| Conread position: | 2-155 | 
| Cow position: | chr3:65058652-65058807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 27, 134 | 
| Conread position: | 2-155 | 
| Cow position: | chr3:73820416-73820259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 25, 128 | 
| Conread position: | 2-155 | 
| Cow position: | chr3:77589471-77589626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 2-156 | 
| Cow position: | chr3:48810693-48810533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 27, 94 | 
| Conread position: | 2-169 | 
| Cow position: | chr3:57624416-57624589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 27, 145 | 
| Conread position: | 2-177 | 
| Cow position: | chr3:10103993-10104172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 27, 67 | 
| Conread position: | 2-177 | 
| Cow position: | chr3:28908251-28908072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 27, 145 | 
| Conread position: | 2-177 | 
| Cow position: | chr3:59630550-59630378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 137, 26 | 
| Conread position: | 2-179 | 
| Cow position: | chr3:21997836-21997651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 26, 136 | 
| Conread position: | 2-191 | 
| Cow position: | chr3:17934986-17934795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 27, 136 | 
| Conread position: | 2-198 | 
| Cow position: | chr3:54100774-54100576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 27, 138 | 
| Conread position: | 2-203 | 
| Cow position: | chr3:28258047-28258252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 21, 108 | 
| Conread position: | 2-205 | 
| Cow position: | chr3:36914002-36914213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 29, 143 | 
| Conread position: | 2-214 | 
| Cow position: | chr3:30222142-30222366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 27, 174 | 
| Conread position: | 2-216 | 
| Cow position: | chr3:34669775-34669560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 161, 135 | 
| Conread position: | 2-227 | 
| Cow position: | chr3:61467238-61467001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 27, 146 | 
| Conread position: | 3-125 | 
| Cow position: | chr3:11715951-11716078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 36, 9 | 
| Conread position: | 3-128 | 
| Cow position: | chr3:60389717-60389848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 3-130 | 
| Cow position: | chr3:15228870-15228737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 3-137 | 
| Cow position: | chr3:15153644-15153784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 3-137 | 
| Cow position: | chr3:58767216-58767356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 3-146 | 
| Cow position: | chr3:48478076-48477935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 26, 82 | 
| Conread position: | 3-148 | 
| Cow position: | chr3:33693773-33693922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 30, 10 | 
| Conread position: | 3-155 | 
| Cow position: | chr3:24596463-24596315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 3-155 | 
| Cow position: | chr3:74787384-74787536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 25, 34 | 
| Conread position: | 3-157 | 
| Cow position: | chr3:37041372-37041530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 20, 137 | 
| Conread position: | 3-205 | 
| Cow position: | chr3:5100819-5100606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 28, 139 | 
| Conread position: | 3-216 | 
| Cow position: | chr3:38347146-38347360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 17, 57 | 
| Conread position: | 4-130 | 
| Cow position: | chr3:73395071-73395202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 4-137 | 
| Cow position: | chr3:58973250-58973388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 27, 125 | 
| Conread position: | 4-155 | 
| Cow position: | chr3:56704367-56704211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 25, 143 | 
| Conread position: | 4-195 | 
| Cow position: | chr3:12711961-12711768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 25, 141 | 
| Conread position: | 4-214 | 
| Cow position: | chr3:46305420-46305617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 35, 78 | 
| Conread position: | 5-154 | 
| Cow position: | chr3:8733399-8733250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 30, 58 | 
| Conread position: | 5-155 | 
| Cow position: | chr3:59828438-59828283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 25, 142 | 
| Conread position: | 5-198 | 
| Cow position: | chr3:53704008-53703810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 24, 117 | 
| Conread position: | 5-279 | 
| Cow position: | chr3:76268020-76267742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 23, 142 | 
| Conread position: | 6-133 | 
| Cow position: | chr3:11292292-11292159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 6-139 | 
| Cow position: | chr3:20515862-20515723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 6-186 | 
| Cow position: | chr3:63657905-63657719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 23, 117 | 
| Conread position: | 7-155 | 
| Cow position: | chr3:2506515-2506367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 132, 82 | 
| Conread position: | 7-198 | 
| Cow position: | chr3:64373199-64373001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 22, 187 | 
| Conread position: | 10-205 | 
| Cow position: | chr3:62046631-62046814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 21-148 | 
| Cow position: | chr3:70402621-70402746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 21-176 | 
| Cow position: | chr3:28556186-28556029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 16, 139 | 
| Conread position: | 22-174 | 
| Cow position: | chr3:1534127-1533975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 109, 120 | 
| Conread position: | 26-177 | 
| Cow position: | chr3:53256511-53256658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 141, 15 | 
| Conread position: | 27-130 | 
| Cow position: | chr3:27246976-27246873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 28-237 | 
| Cow position: | chr3:15660306-15660105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 138, 21 | 
| Conread position: | 29-130 | 
| Cow position: | chr3:74846724-74846623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 102 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 29-130 | 
| Cow position: | chr3:77276473-77276373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 102 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 29-155 | 
| Cow position: | chr3:74134689-74134814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 30-176 | 
| Cow position: | chr3:35285029-35285171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 30-177 | 
| Cow position: | chr3:2179105-2179254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 109, 37 | 
| Conread position: | 31-153 | 
| Cow position: | chr3:75966794-75966673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 77, 23 | 
| Conread position: | 31-155 | 
| Cow position: | chr3:8814126-8814002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 115, 110 | 
| Conread position: | 31-223 | 
| Cow position: | chr3:6853547-6853358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 19, 35 | 
| Conread position: | 32-177 | 
| Cow position: | chr3:61133626-61133769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 33-179 | 
| Cow position: | chr3:32457183-32457326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 33-205 | 
| Cow position: | chr3:84175834-84175656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 100, 170 | 
| Conread position: | 36-205 | 
| Cow position: | chr3:4086872-4086705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 103, 135 | 
| Conread position: | 36-205 | 
| Cow position: | chr3:23265342-23265178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 35, 18 | 
| Conread position: | 40-154 | 
| Cow position: | chr3:31352879-31352770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 40-179 | 
| Cow position: | chr3:68620927-68620790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 40-231 | 
| Cow position: | chr3:27108893-27108708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 79, 97 | 
| Conread position: | 56-179 | 
| Cow position: | chr3:70264199-70264076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 112, 80 | 
| Conread position: | 67-227 | 
| Cow position: | chr3:48578826-48578993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 5, 107 | 
Show alignments to all cow chromosomes.
