Cow genome map
| Conread name: | Emb1-C0005183_N05 |
| Conread position: | 1-136 |
| Cow position: | chr10:21424722-21424579 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-174 |
| Cow position: | chr10:53762161-53761982 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 77, 102 |
| Conread position: | 1-176 |
| Cow position: | chr10:11032538-11032359 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 1-187 |
| Cow position: | chr10:62516835-62517033 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-189 |
| Cow position: | chr10:9530030-9529843 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 1-191 |
| Cow position: | chr10:59153697-59153507 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 1-193 |
| Cow position: | chr10:3365820-3365631 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 149, 15 |
| Conread position: | 1-194 |
| Cow position: | chr10:51221109-51220919 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 107, 69 |
| Conread position: | 1-198 |
| Cow position: | chr10:6568190-6568387 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 31 |
| Conread position: | 1-198 |
| Cow position: | chr10:9341777-9341574 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 1-199 |
| Cow position: | chr10:41984934-41984724 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-199 |
| Cow position: | chr10:65072163-65071954 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 150 |
| Conread position: | 1-204 |
| Cow position: | chr10:31368779-31368567 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 149 |
| Conread position: | 1-206 |
| Cow position: | chr10:52244694-52244477 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 1-208 |
| Cow position: | chr10:6038381-6038170 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 69, 159 |
| Conread position: | 1-208 |
| Cow position: | chr10:40646633-40646844 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 1-209 |
| Cow position: | chr10:49624720-49624941 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-189 |
| Cow position: | chr10:56705631-56705433 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 2-206 |
| Cow position: | chr10:2407176-2406963 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 3-194 |
| Cow position: | chr10:22479767-22479569 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 75, 134 |
| Conread position: | 3-198 |
| Cow position: | chr10:51878098-51878296 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 4-194 |
| Cow position: | chr10:27576415-27576613 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 4-200 |
| Cow position: | chr10:34167843-34168035 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 74, 98 |
| Conread position: | 4-202 |
| Cow position: | chr10:11497195-11497387 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 4-208 |
| Cow position: | chr10:19126947-19126741 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 5-194 |
| Cow position: | chr10:24786065-24786266 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 5-198 |
| Cow position: | chr10:10124301-10124505 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 5-198 |
| Cow position: | chr10:62325574-62325772 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 6-177 |
| Cow position: | chr10:30753144-30753315 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 6-189 |
| Cow position: | chr10:58608062-58608255 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 6-192 |
| Cow position: | chr10:23948961-23948763 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 6-198 |
| Cow position: | chr10:39081356-39081555 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 6-206 |
| Cow position: | chr10:68251775-68251981 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 169 |
| Conread position: | 6-210 |
| Cow position: | chr10:29689374-29689157 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 138 |
| Conread position: | 8-194 |
| Cow position: | chr10:38429585-38429394 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 62, 123 |
| Conread position: | 11-197 |
| Cow position: | chr10:68566146-68566333 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 11-205 |
| Cow position: | chr10:31250770-31250573 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 168 |
| Conread position: | 12-198 |
| Cow position: | chr10:8413087-8412892 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 157 |
| Conread position: | 13-211 |
| Cow position: | chr10:55012107-55012310 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 17-198 |
| Cow position: | chr10:42454098-42454281 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 24-189 |
| Cow position: | chr10:6012061-6011899 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 24-206 |
| Cow position: | chr10:66791211-66791396 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 105 |
| Conread position: | 28-189 |
| Cow position: | chr10:45299795-45299960 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 141 |
| Conread position: | 44-194 |
| Cow position: | chr10:69531976-69532120 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 44-197 |
| Cow position: | chr10:48493081-48492934 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 22 |
| Conread position: | 48-200 |
| Cow position: | chr10:45614105-45613948 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 146 |
| Conread position: | 64-192 |
| Cow position: | chr10:67144629-67144751 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 71-193 |
| Cow position: | chr10:50776746-50776862 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 71-217 |
| Cow position: | chr10:61113224-61113364 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 75-209 |
| Cow position: | chr10:20514350-20514484 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-194 |
| Cow position: | chr10:49060474-49060590 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 76-204 |
| Cow position: | chr10:61426695-61426567 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-211 |
| Cow position: | chr10:21477176-21477285 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.