Cow genome map
| Conread name: | Emb1-C0005183_N05 |
| Conread position: | 1-171 |
| Cow position: | chr12:31528917-31528735 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-186 |
| Cow position: | chr12:21829025-21829206 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-189 |
| Cow position: | chr12:40716102-40715910 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 130 |
| Conread position: | 1-194 |
| Cow position: | chr12:7645864-7645667 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 1-198 |
| Cow position: | chr12:17109951-17109749 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 113 |
| Conread position: | 1-198 |
| Cow position: | chr12:25619433-25619229 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 125 |
| Conread position: | 1-199 |
| Cow position: | chr12:1223402-1223198 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 69, 127 |
| Conread position: | 1-205 |
| Cow position: | chr12:18769132-18768917 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 157 |
| Conread position: | 1-208 |
| Cow position: | chr12:5797618-5797411 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 69, 116 |
| Conread position: | 1-210 |
| Cow position: | chr12:18093832-18094048 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 207 |
| Conread position: | 2-180 |
| Cow position: | chr12:13657804-13657613 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 139 |
| Conread position: | 4-167 |
| Cow position: | chr12:35354723-35354881 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 4-189 |
| Cow position: | chr12:48425656-48425848 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 4-194 |
| Cow position: | chr12:27055549-27055746 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 4-204 |
| Cow position: | chr12:7996355-7996564 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 4-211 |
| Cow position: | chr12:18966812-18966597 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 195 |
| Conread position: | 4-213 |
| Cow position: | chr12:17262797-17263015 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 66, 88 |
| Conread position: | 8-194 |
| Cow position: | chr12:25312423-25312232 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 99 |
| Conread position: | 9-198 |
| Cow position: | chr12:5497875-5497681 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 128 |
| Conread position: | 10-210 |
| Cow position: | chr12:29691245-29691039 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 57, 198 |
| Conread position: | 10-212 |
| Cow position: | chr12:30064887-30065095 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 127 |
| Conread position: | 11-184 |
| Cow position: | chr12:31257968-31258140 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 64 |
| Conread position: | 11-194 |
| Cow position: | chr12:42918424-42918607 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 41, 57 |
| Conread position: | 12-191 |
| Cow position: | chr12:44057469-44057657 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 13-172 |
| Cow position: | chr12:45541662-45541829 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 13-192 |
| Cow position: | chr12:34242375-34242184 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 13-197 |
| Cow position: | chr12:25933635-25933827 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 41, 138 |
| Conread position: | 27-196 |
| Cow position: | chr12:14855779-14855959 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 48-203 |
| Cow position: | chr12:25606703-25606859 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 74-208 |
| Cow position: | chr12:11499782-11499913 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 126, 55 |
| Conread position: | 76-168 |
| Cow position: | chr12:27038717-27038625 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-199 |
| Cow position: | chr12:7274674-7274556 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 114, 57 |
| Conread position: | 76-207 |
| Cow position: | chr12:36109237-36109104 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 76-207 |
| Cow position: | chr12:38096148-38096279 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 121 |
| Conread position: | 88-210 |
| Cow position: | chr12:37394976-37395094 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 79, 40 |
Show alignments to all cow chromosomes.