Cow genome map
| Conread name: | Emb1-C0005183_N05 |
| Conread position: | 1-182 |
| Cow position: | chr14:7582388-7582570 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 136 |
| Conread position: | 1-192 |
| Cow position: | chr14:21369429-21369231 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 73, 145 |
| Conread position: | 1-193 |
| Cow position: | chr14:28605298-28605094 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-194 |
| Cow position: | chr14:27104144-27103946 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 69, 166 |
| Conread position: | 1-197 |
| Cow position: | chr14:19022833-19023039 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 150 |
| Conread position: | 1-200 |
| Cow position: | chr14:7813507-7813711 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 78, 111 |
| Conread position: | 1-205 |
| Cow position: | chr14:43031862-43031646 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-206 |
| Cow position: | chr14:47974045-47973836 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 1-211 |
| Cow position: | chr14:29860932-29860721 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 132 |
| Conread position: | 4-190 |
| Cow position: | chr14:33553246-33553060 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 70 |
| Conread position: | 4-193 |
| Cow position: | chr14:28565532-28565338 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 161 |
| Conread position: | 4-194 |
| Cow position: | chr14:21018172-21017977 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 171 |
| Conread position: | 4-201 |
| Cow position: | chr14:8488248-8488049 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 4-206 |
| Cow position: | chr14:47138729-47138936 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 66 |
| Conread position: | 4-215 |
| Cow position: | chr14:6984904-6985114 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 5-192 |
| Cow position: | chr14:13928063-13928260 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 164 |
| Conread position: | 5-192 |
| Cow position: | chr14:47519691-47519889 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 5-194 |
| Cow position: | chr14:23107385-23107179 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 184 |
| Conread position: | 5-197 |
| Cow position: | chr14:26108694-26108491 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 149 |
| Conread position: | 5-198 |
| Cow position: | chr14:20865259-20865452 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 5-210 |
| Cow position: | chr14:2189694-2189478 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 101 |
| Conread position: | 6-198 |
| Cow position: | chr14:6816285-6816097 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 179, 65 |
| Conread position: | 7-216 |
| Cow position: | chr14:23008237-23008026 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 63, 133 |
| Conread position: | 11-171 |
| Cow position: | chr14:34256870-34257036 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 12-199 |
| Cow position: | chr14:6583051-6582852 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 16-213 |
| Cow position: | chr14:20701769-20701976 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 25-198 |
| Cow position: | chr14:37624732-37624912 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 25-210 |
| Cow position: | chr14:36080877-36081071 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 44-191 |
| Cow position: | chr14:37333717-37333564 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 45-213 |
| Cow position: | chr14:38419338-38419172 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 46-193 |
| Cow position: | chr14:35700440-35700290 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 47-197 |
| Cow position: | chr14:6441914-6441765 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 51-199 |
| Cow position: | chr14:38688232-38688378 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 138, 14 |
| Conread position: | 56-194 |
| Cow position: | chr14:7614061-7613923 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 14 |
| Conread position: | 65-206 |
| Cow position: | chr14:46114162-46114309 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 73-192 |
| Cow position: | chr14:43565897-43566016 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-211 |
| Cow position: | chr14:29481402-29481543 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 74-214 |
| Cow position: | chr14:18238142-18238002 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 108, 95 |
| Conread position: | 76-198 |
| Cow position: | chr14:26153290-26153412 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-209 |
| Cow position: | chr14:15039955-15040082 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 80-199 |
| Cow position: | chr14:17212486-17212606 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
Show alignments to all cow chromosomes.