Cow genome map

Conread name: Emb1-C0005183_N05

Conread position: 1-162
Cow position: chr16:10303768-10303600 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 69, 51

Conread position: 1-189
Cow position: chr16:2619002-2618810 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 26

Conread position: 1-189
Cow position: chr16:49320942-49321132 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 174

Conread position: 1-194
Cow position: chr16:23066640-23066837 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 1-195
Cow position: chr16:51652654-51652850 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 65

Conread position: 1-196
Cow position: chr16:19003110-19002907 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 1-198
Cow position: chr16:1440417-1440612 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 35

Conread position: 1-198
Cow position: chr16:44898771-44898575 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 69

Conread position: 1-198
Cow position: chr16:52577435-52577644 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-199
Cow position: chr16:45693126-45693330 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 148

Conread position: 1-206
Cow position: chr16:22872390-22872186 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 67

Conread position: 1-206
Cow position: chr16:28454311-28454107 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 155

Conread position: 1-207
Cow position: chr16:30639315-30639520 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 76, 16

Conread position: 1-209
Cow position: chr16:26156159-26155945 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 1-210
Cow position: chr16:19976948-19977154 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 69, 41

Conread position: 1-213
Cow position: chr16:18427165-18427382 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 153

Conread position: 2-180
Cow position: chr16:41711654-41711841 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 3-197
Cow position: chr16:33121590-33121789 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 4-162
Cow position: chr16:28267042-28266882 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 20

Conread position: 4-173
Cow position: chr16:32837563-32837387 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 24

Conread position: 4-181
Cow position: chr16:43082251-43082072 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 105

Conread position: 4-196
Cow position: chr16:47368743-47368935 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 157

Conread position: 5-193
Cow position: chr16:42312368-42312565 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 47, 11

Conread position: 5-198
Cow position: chr16:11662018-11662219 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 6-165
Cow position: chr16:15320496-15320330 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 6-179
Cow position: chr16:12072624-12072802 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 48

Conread position: 6-188
Cow position: chr16:3628796-3628971 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 92, 50

Conread position: 7-207
Cow position: chr16:16546060-16546266 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 170

Conread position: 9-206
Cow position: chr16:20260461-20260666 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 168

Conread position: 14-207
Cow position: chr16:34210408-34210214 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 108

Conread position: 17-205
Cow position: chr16:31490313-31490508 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 91

Conread position: 19-191
Cow position: chr16:8704264-8704435 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 52

Conread position: 25-209
Cow position: chr16:9510869-9510675 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 25-211
Cow position: chr16:29094874-29095059 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 32

Conread position: 30-194
Cow position: chr16:9407868-9407695 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 46-198
Cow position: chr16:228464-228311 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 96

Conread position: 48-198
Cow position: chr16:11772214-11772063 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 18

Conread position: 49-194
Cow position: chr16:47116099-47116247 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 122

Conread position: 54-199
Cow position: chr16:11777162-11777011 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 11

Conread position: 64-198
Cow position: chr16:13027216-13027082 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 70

Conread position: 65-197
Cow position: chr16:4708849-4708715 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 74-199
Cow position: chr16:46680877-46680999 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 76-198
Cow position: chr16:49122201-49122080 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 76-207
Cow position: chr16:31222602-31222731 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 76-209
Cow position: chr16:34384767-34384903 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 72

Conread position: 89-192
Cow position: chr16:11864352-11864250 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 104-207
Cow position: chr16:25127371-25127474 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.