Cow genome map
| Conread name: | Emb1-C0005183_N05 |
| Conread position: | 1-158 |
| Cow position: | chr2:70464414-70464578 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 1-162 |
| Cow position: | chr2:53000491-53000658 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 1-167 |
| Cow position: | chr2:38376883-38377053 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 135 |
| Conread position: | 1-185 |
| Cow position: | chr2:64197014-64196821 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-189 |
| Cow position: | chr2:6444008-6444208 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-189 |
| Cow position: | chr2:59380505-59380321 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 95 |
| Conread position: | 1-192 |
| Cow position: | chr2:8601702-8601506 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 145 |
| Conread position: | 1-194 |
| Cow position: | chr2:40427814-40427615 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-194 |
| Cow position: | chr2:50400404-50400592 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 1-197 |
| Cow position: | chr2:7498556-7498760 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-198 |
| Cow position: | chr2:7720930-7720727 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 11 |
| Conread position: | 1-198 |
| Cow position: | chr2:33659725-33659515 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-206 |
| Cow position: | chr2:82054866-82054646 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 89 |
| Conread position: | 1-208 |
| Cow position: | chr2:39912616-39912398 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 1-211 |
| Cow position: | chr2:31155689-31155906 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 161 |
| Conread position: | 2-195 |
| Cow position: | chr2:72902308-72902105 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 176 |
| Conread position: | 3-204 |
| Cow position: | chr2:42774261-42774468 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 4-167 |
| Cow position: | chr2:62309444-62309277 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 4-181 |
| Cow position: | chr2:14099634-14099818 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 4-189 |
| Cow position: | chr2:34256315-34256132 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 4-197 |
| Cow position: | chr2:68273562-68273762 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 157 |
| Conread position: | 4-198 |
| Cow position: | chr2:32453550-32453345 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 4-199 |
| Cow position: | chr2:49480609-49480404 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 4-206 |
| Cow position: | chr2:42309571-42309358 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 68, 204 |
| Conread position: | 4-208 |
| Cow position: | chr2:73999705-73999917 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 4-208 |
| Cow position: | chr2:83745063-83744857 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 66, 117 |
| Conread position: | 5-194 |
| Cow position: | chr2:41897442-41897626 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-204 |
| Cow position: | chr2:58685367-58685577 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-205 |
| Cow position: | chr2:70663998-70664211 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 5-207 |
| Cow position: | chr2:77982161-77981961 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 6-197 |
| Cow position: | chr2:72583907-72584106 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 6-198 |
| Cow position: | chr2:36294810-36295014 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 112 |
| Conread position: | 6-199 |
| Cow position: | chr2:13466019-13466219 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 62, 178 |
| Conread position: | 8-208 |
| Cow position: | chr2:61442584-61442794 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 10-187 |
| Cow position: | chr2:25084673-25084861 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 160 |
| Conread position: | 13-206 |
| Cow position: | chr2:43773585-43773391 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 52, 100 |
| Conread position: | 13-208 |
| Cow position: | chr2:27613037-27612840 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 16-198 |
| Cow position: | chr2:17427163-17427357 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 16-207 |
| Cow position: | chr2:33596665-33596452 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 17-196 |
| Cow position: | chr2:61471825-61472015 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 19-198 |
| Cow position: | chr2:36866781-36866600 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 23-194 |
| Cow position: | chr2:21183149-21183328 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 33-197 |
| Cow position: | chr2:45435111-45435282 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 158 |
| Conread position: | 43-166 |
| Cow position: | chr2:19154755-19154878 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 45-203 |
| Cow position: | chr2:72687937-72687780 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 49-189 |
| Cow position: | chr2:55670212-55670351 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 63-198 |
| Cow position: | chr2:53969944-53969809 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 64-198 |
| Cow position: | chr2:4070974-4071107 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 65-207 |
| Cow position: | chr2:10461418-10461561 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 70-198 |
| Cow position: | chr2:8245575-8245705 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 71-204 |
| Cow position: | chr2:67485306-67485436 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 74-217 |
| Cow position: | chr2:51041552-51041407 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 76-197 |
| Cow position: | chr2:68010137-68010017 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 76-205 |
| Cow position: | chr2:29545678-29545548 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 117 |
| Conread position: | 80-205 |
| Cow position: | chr2:38913739-38913863 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 91-194 |
| Cow position: | chr2:47791691-47791794 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.