Cow genome map

Conread name: Emb1-C0005183_N05

Conread position: 1-161
Cow position: chr3:4329276-4329444 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 1-179
Cow position: chr3:25250861-25251047 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 24

Conread position: 1-181
Cow position: chr3:10431557-10431744 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 53

Conread position: 1-182
Cow position: chr3:58632519-58632707 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 59

Conread position: 1-189
Cow position: chr3:14505962-14505762 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-193
Cow position: chr3:5419907-5419712 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 176

Conread position: 1-193
Cow position: chr3:58291936-58291736 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 1-194
Cow position: chr3:8752740-8752942 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 111

Conread position: 1-194
Cow position: chr3:23092023-23091821 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 109

Conread position: 1-196
Cow position: chr3:61009481-61009285 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 15

Conread position: 1-197
Cow position: chr3:55991912-55991709 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 138

Conread position: 1-197
Cow position: chr3:70354278-70354077 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 21

Conread position: 1-198
Cow position: chr3:9629840-9630042 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 102

Conread position: 1-198
Cow position: chr3:15221565-15221357 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 188

Conread position: 1-198
Cow position: chr3:41550422-41550215 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 114

Conread position: 1-199
Cow position: chr3:61322797-61322998 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 160

Conread position: 1-200
Cow position: chr3:5601214-5601006 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 135

Conread position: 1-200
Cow position: chr3:73436488-73436276 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-204
Cow position: chr3:77490532-77490739 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 15

Conread position: 1-207
Cow position: chr3:56637617-56637822 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 73

Conread position: 1-208
Cow position: chr3:53588430-53588213 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 9

Conread position: 1-212
Cow position: chr3:20092569-20092350 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 1-215
Cow position: chr3:25090989-25091210 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 128

Conread position: 3-156
Cow position: chr3:37452027-37452184 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 134

Conread position: 3-199
Cow position: chr3:64536605-64536407 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 21

Conread position: 4-185
Cow position: chr3:6690211-6690399 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 66, 41

Conread position: 4-189
Cow position: chr3:55373610-55373414 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 4-190
Cow position: chr3:31933140-31932952 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 155

Conread position: 4-198
Cow position: chr3:24300317-24300529 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 13

Conread position: 4-207
Cow position: chr3:74205849-74205635 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 4-208
Cow position: chr3:8924003-8924212 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 26

Conread position: 4-216
Cow position: chr3:30839205-30839421 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 155

Conread position: 5-193
Cow position: chr3:22271494-22271300 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 142

Conread position: 5-194
Cow position: chr3:12255437-12255629 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 134

Conread position: 5-194
Cow position: chr3:24538833-24539030 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 5-199
Cow position: chr3:54340465-54340259 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 136

Conread position: 5-206
Cow position: chr3:51146709-51146503 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 26

Conread position: 5-209
Cow position: chr3:62884164-62884369 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 57, 126

Conread position: 5-213
Cow position: chr3:9074389-9074169 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 6-150
Cow position: chr3:1300177-1300329 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 6-194
Cow position: chr3:61411085-61411278 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 47

Conread position: 6-198
Cow position: chr3:25076209-25076005 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 7-207
Cow position: chr3:39911096-39910891 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 63, 124

Conread position: 9-198
Cow position: chr3:68342288-68342098 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 92

Conread position: 10-207
Cow position: chr3:18214178-18213967 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 167

Conread position: 11-193
Cow position: chr3:891231-891419 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 154

Conread position: 11-200
Cow position: chr3:23111550-23111350 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 164

Conread position: 11-202
Cow position: chr3:63039079-63039265 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 178, 60

Conread position: 11-207
Cow position: chr3:22953916-22953717 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 153

Conread position: 11-209
Cow position: chr3:74611530-74611736 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 13-200
Cow position: chr3:77297345-77297154 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 111

Conread position: 13-213
Cow position: chr3:50281787-50281576 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 152

Conread position: 15-198
Cow position: chr3:58448093-58447905 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 37

Conread position: 22-208
Cow position: chr3:5844897-5845091 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 70

Conread position: 24-194
Cow position: chr3:54126276-54126102 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 116

Conread position: 29-177
Cow position: chr3:74701358-74701205 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 45-205
Cow position: chr3:84112580-84112410 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 46-207
Cow position: chr3:74912855-74913021 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 130

Conread position: 65-197
Cow position: chr3:57634293-57634425 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 43

Conread position: 71-197
Cow position: chr3:25027436-25027561 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 74-199
Cow position: chr3:61116815-61116691 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 76-198
Cow position: chr3:60145255-60145376 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 76-208
Cow position: chr3:62628225-62628092 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 91

Show alignments to all cow chromosomes.