Cow genome map
| Conread name: | Emb1-C0005183_N05 |
| Conread position: | 1-154 |
| Cow position: | chr7:34441164-34441004 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-162 |
| Cow position: | chr7:17922301-17922470 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 1-194 |
| Cow position: | chr7:5249891-5249687 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 145 |
| Conread position: | 1-194 |
| Cow position: | chr7:25914468-25914267 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 72, 172 |
| Conread position: | 1-196 |
| Cow position: | chr7:48648602-48648397 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 1-198 |
| Cow position: | chr7:11872586-11872368 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-198 |
| Cow position: | chr7:26908012-26907813 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 1-199 |
| Cow position: | chr7:36746349-36746551 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 1-199 |
| Cow position: | chr7:47172687-47172482 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 1-199 |
| Cow position: | chr7:59245974-59246181 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 176 |
| Conread position: | 1-202 |
| Cow position: | chr7:25445415-25445631 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 1-205 |
| Cow position: | chr7:25685022-25684815 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 175 |
| Conread position: | 1-205 |
| Cow position: | chr7:51321758-51321966 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 109 |
| Conread position: | 1-208 |
| Cow position: | chr7:57260225-57260013 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 77, 201 |
| Conread position: | 1-213 |
| Cow position: | chr7:55714089-55714316 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 119 |
| Conread position: | 2-207 |
| Cow position: | chr7:62102617-62102827 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 148 |
| Conread position: | 4-182 |
| Cow position: | chr7:26466768-26466953 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 4-194 |
| Cow position: | chr7:37906336-37906135 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 4-196 |
| Cow position: | chr7:55076674-55076483 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 78, 66 |
| Conread position: | 4-197 |
| Cow position: | chr7:39603347-39603549 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 4-198 |
| Cow position: | chr7:53005374-53005573 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 177 |
| Conread position: | 4-199 |
| Cow position: | chr7:43215532-43215742 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-204 |
| Cow position: | chr7:13587203-13587413 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 4-205 |
| Cow position: | chr7:48289394-48289601 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 55, 135 |
| Conread position: | 4-207 |
| Cow position: | chr7:58490107-58490311 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 163 |
| Conread position: | 5-191 |
| Cow position: | chr7:64140114-64139925 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 5-194 |
| Cow position: | chr7:43234422-43234221 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 5-199 |
| Cow position: | chr7:20108966-20108764 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 5-199 |
| Cow position: | chr7:47874960-47874761 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 135 |
| Conread position: | 6-198 |
| Cow position: | chr7:4512788-4512592 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 6-198 |
| Cow position: | chr7:53743873-53743673 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 6-199 |
| Cow position: | chr7:12755128-12754927 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 7-197 |
| Cow position: | chr7:40192772-40192975 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 165 |
| Conread position: | 7-200 |
| Cow position: | chr7:1733172-1732974 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 11-174 |
| Cow position: | chr7:664224-664051 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 11-206 |
| Cow position: | chr7:19881015-19880811 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 195 |
| Conread position: | 16-198 |
| Cow position: | chr7:41727981-41728170 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 17-194 |
| Cow position: | chr7:26665521-26665346 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 38 |
| Conread position: | 25-205 |
| Cow position: | chr7:24521297-24521484 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 27-197 |
| Cow position: | chr7:10345419-10345241 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 28-211 |
| Cow position: | chr7:31224351-31224170 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 64-195 |
| Cow position: | chr7:38068568-38068700 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 126, 59 |
| Conread position: | 65-198 |
| Cow position: | chr7:4264439-4264307 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 65-211 |
| Cow position: | chr7:62470887-62471032 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 73-198 |
| Cow position: | chr7:57319813-57319688 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-202 |
| Cow position: | chr7:60722734-60722610 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 74-182 |
| Cow position: | chr7:35529090-35528982 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-198 |
| Cow position: | chr7:5220955-5221079 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 75-199 |
| Cow position: | chr7:11155727-11155601 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 76-213 |
| Cow position: | chr7:3134063-3133925 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 77-207 |
| Cow position: | chr7:19423668-19423801 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 88-198 |
| Cow position: | chr7:50401704-50401597 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.