Cow genome map
| Conread name: | Emb1-C0005183_N05 |
| Conread position: | 1-149 |
| Cow position: | chr8:966876-967018 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-161 |
| Cow position: | chr8:11590911-11591078 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 110 |
| Conread position: | 1-165 |
| Cow position: | chr8:45586431-45586260 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 115 |
| Conread position: | 1-182 |
| Cow position: | chr8:13975882-13976070 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 137 |
| Conread position: | 1-184 |
| Cow position: | chr8:34318087-34317890 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 53, 184 |
| Conread position: | 1-185 |
| Cow position: | chr8:36505367-36505558 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 71, 126 |
| Conread position: | 1-187 |
| Cow position: | chr8:24426642-24426839 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 116 |
| Conread position: | 1-187 |
| Cow position: | chr8:41318028-41318221 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 1-194 |
| Cow position: | chr8:35218353-35218558 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-197 |
| Cow position: | chr8:13810192-13810397 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 1-197 |
| Cow position: | chr8:53866098-53866296 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 1-198 |
| Cow position: | chr8:56033885-56033675 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-202 |
| Cow position: | chr8:28221575-28221367 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 69, 164 |
| Conread position: | 1-206 |
| Cow position: | chr8:26451111-26451326 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 1-207 |
| Cow position: | chr8:25573030-25573246 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-208 |
| Cow position: | chr8:942802-943016 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 1-208 |
| Cow position: | chr8:51905051-51904830 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-209 |
| Cow position: | chr8:5997771-5997562 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 1-215 |
| Cow position: | chr8:32278029-32277815 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 69, 101 |
| Conread position: | 3-161 |
| Cow position: | chr8:48763541-48763705 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 67, 89 |
| Conread position: | 4-181 |
| Cow position: | chr8:26922612-26922800 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 139 |
| Conread position: | 4-187 |
| Cow position: | chr8:11249487-11249298 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 168 |
| Conread position: | 4-189 |
| Cow position: | chr8:37487307-37487110 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 4-191 |
| Cow position: | chr8:27053606-27053416 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 163 |
| Conread position: | 4-201 |
| Cow position: | chr8:6469176-6468964 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 4-210 |
| Cow position: | chr8:20682385-20682605 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 202 |
| Conread position: | 5-191 |
| Cow position: | chr8:25075589-25075782 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 113 |
| Conread position: | 5-193 |
| Cow position: | chr8:46640338-46640146 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 5-194 |
| Cow position: | chr8:49265311-49265110 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 153 |
| Conread position: | 5-198 |
| Cow position: | chr8:51959407-51959212 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 50, 7 |
| Conread position: | 5-205 |
| Cow position: | chr8:39017696-39017908 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 5-206 |
| Cow position: | chr8:19512470-19512276 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 69 |
| Conread position: | 6-177 |
| Cow position: | chr8:52863811-52863994 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-184 |
| Cow position: | chr8:9811793-9811983 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 6-204 |
| Cow position: | chr8:8134507-8134298 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 6-211 |
| Cow position: | chr8:43693205-43693422 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 145 |
| Conread position: | 7-198 |
| Cow position: | chr8:15969566-15969370 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 11-194 |
| Cow position: | chr8:32079681-32079491 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 11-194 |
| Cow position: | chr8:37114909-37114721 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 60, 77 |
| Conread position: | 11-204 |
| Cow position: | chr8:11896201-11896400 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 170 |
| Conread position: | 12-207 |
| Cow position: | chr8:6330680-6330882 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 159 |
| Conread position: | 17-165 |
| Cow position: | chr8:1099176-1099030 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 19-200 |
| Cow position: | chr8:24547025-24547213 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 51 |
| Conread position: | 21-214 |
| Cow position: | chr8:13900409-13900614 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 24-195 |
| Cow position: | chr8:29935935-29936111 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 24-211 |
| Cow position: | chr8:7671358-7671556 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 46, 184 |
| Conread position: | 25-198 |
| Cow position: | chr8:23030647-23030826 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 44, 147 |
| Conread position: | 25-208 |
| Cow position: | chr8:36471556-36471746 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 47-207 |
| Cow position: | chr8:18175957-18175802 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 54-196 |
| Cow position: | chr8:34055124-34054982 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 75-197 |
| Cow position: | chr8:37509142-37509020 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 78-183 |
| Cow position: | chr8:20052844-20052738 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 88-209 |
| Cow position: | chr8:13738597-13738718 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-204 |
| Cow position: | chr8:44704652-44704756 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 104-187 |
| Cow position: | chr8:18218758-18218676 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 74 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.