Cow genome map
| Conread name: | Emb1-C0005186_G17 |
| Conread position: | 5-435 |
| Cow position: | chr14:25794586-25794154 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 5-443 |
| Cow position: | chr14:25783520-25783961 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-443 |
| Cow position: | chr14:25783856-25784297 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 5-443 |
| Cow position: | chr14:25783940-25784381 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 5-443 |
| Cow position: | chr14:25795006-25794565 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 112, 289 |
| Conread position: | 5-443 |
| Cow position: | chr14:25836139-25836580 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 5-443 |
| Cow position: | chr14:25876831-25877272 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 112, 226 |
| Conread position: | 6-443 |
| Cow position: | chr14:25784193-25784633 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 7-435 |
| Cow position: | chr14:25783438-25783869 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 62-443 |
| Cow position: | chr14:25794865-25794481 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 149 |
| Conread position: | 90-443 |
| Cow position: | chr14:25795257-25794901 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 151 |
| Conread position: | 128-417 |
| Cow position: | chr14:447555-447844 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 183, 179 |
| Conread position: | 128-426 |
| Cow position: | chr14:3080208-3079910 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-441 |
| Cow position: | chr14:25876537-25876850 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 177, 184 |
| Conread position: | 128-443 |
| Cow position: | chr14:25784150-25784465 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 169, 159 |
| Conread position: | 132-369 |
| Cow position: | chr14:3100949-3100714 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 80 |
| Conread position: | 133-432 |
| Cow position: | chr14:3155953-3156252 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-443 |
| Cow position: | chr14:680950-681260 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 134-433 |
| Cow position: | chr14:3127714-3127415 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 252, 229 |
| Conread position: | 138-443 |
| Cow position: | chr14:25783404-25783709 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 140-443 |
| Cow position: | chr14:3080280-3079977 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 157, 147 |
| Conread position: | 141-443 |
| Cow position: | chr14:25859583-25859885 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-408 |
| Cow position: | chr14:3100604-3100339 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 143-433 |
| Cow position: | chr14:25836364-25836654 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 154, 133 |
| Conread position: | 143-443 |
| Cow position: | chr14:25783493-25783793 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 154, 144 |
| Conread position: | 143-443 |
| Cow position: | chr14:25795453-25795153 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 143-443 |
| Cow position: | chr14:25836112-25836412 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 143-443 |
| Cow position: | chr14:25836616-25836916 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-443 |
| Cow position: | chr14:25860341-25860641 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 143-443 |
| Cow position: | chr14:25876636-25876936 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 143-443 |
| Cow position: | chr14:25876720-25877020 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 158, 168 |
| Conread position: | 143-443 |
| Cow position: | chr14:25877392-25877692 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 143-443 |
| Cow position: | chr14:25910896-25911196 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 151-443 |
| Cow position: | chr14:25836540-25836832 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-441 |
| Cow position: | chr14:25859511-25859799 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 154-443 |
| Cow position: | chr14:3101011-3100724 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 166-443 |
| Cow position: | chr14:25783348-25783625 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 197-443 |
| Cow position: | chr14:25783295-25783541 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 234-443 |
| Cow position: | chr14:25836959-25837168 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 71, 78 |
| Conread position: | 239-443 |
| Cow position: | chr14:25876564-25876768 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.