Cow genome map
| Conread name: | Emb1-C0005186_G17 |
| Conread position: | 4-443 |
| Cow position: | chr17:22589675-22589233 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 5-358 |
| Cow position: | chr17:22551836-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-419 |
| Cow position: | chr17:22589590-22589173 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 65, 60 |
| Conread position: | 5-432 |
| Cow position: | chr17:22552339-22551910 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 5 |
| Conread position: | 5-435 |
| Cow position: | chr17:22499303-22498870 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 114, 285 |
| Conread position: | 5-441 |
| Cow position: | chr17:22589758-22589319 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 280 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 112, 372 |
| Conread position: | 5-441 |
| Cow position: | chr17:22590010-22589571 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-443 |
| Cow position: | chr17:22452205-22451764 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 280 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 117, 206 |
| Conread position: | 5-443 |
| Cow position: | chr17:22452373-22451932 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 5-443 |
| Cow position: | chr17:22473426-22473867 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 112, 221 |
| Conread position: | 5-443 |
| Cow position: | chr17:22473510-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 5-443 |
| Cow position: | chr17:22499135-22498694 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-443 |
| Cow position: | chr17:22552004-22551563 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 5-443 |
| Cow position: | chr17:22552172-22551731 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 54 |
| Conread position: | 5-443 |
| Cow position: | chr17:22552424-22551983 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 5-443 |
| Cow position: | chr17:22552592-22552151 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 283 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 112, 236 |
| Conread position: | 5-443 |
| Cow position: | chr17:22552676-22552235 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-443 |
| Cow position: | chr17:22552844-22552403 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 54 |
| Conread position: | 8-434 |
| Cow position: | chr17:22553009-22552580 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 109, 302 |
| Conread position: | 8-443 |
| Cow position: | chr17:22553093-22552655 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 9-432 |
| Cow position: | chr17:22473262-22473688 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 109, 281 |
| Conread position: | 9-443 |
| Cow position: | chr17:22589838-22589401 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 284 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 10-443 |
| Cow position: | chr17:22590257-22589821 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 13-443 |
| Cow position: | chr17:22452281-22451848 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 20-443 |
| Cow position: | chr17:22590079-22589653 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 97, 270 |
| Conread position: | 34-432 |
| Cow position: | chr17:22551891-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 133-431 |
| Cow position: | chr17:22498836-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 164, 154 |
| Conread position: | 142-443 |
| Cow position: | chr17:22452401-22452100 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-443 |
| Cow position: | chr17:22499331-22499030 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 155-443 |
| Cow position: | chr17:22473327-22473615 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 225, 214 |
| Conread position: | 162-443 |
| Cow position: | chr17:22553105-22552823 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 190-443 |
| Cow position: | chr17:22473278-22473531 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 206-426 |
| Cow position: | chr17:22590309-22590090 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 206-443 |
| Cow position: | chr17:22553144-22552907 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 215-433 |
| Cow position: | chr17:22452412-22452194 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-436 |
| Cow position: | chr17:22498835-22498617 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 233-443 |
| Cow position: | chr17:22452226-22452016 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 248-442 |
| Cow position: | chr17:22499393-22499199 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.