Cow genome map
| Conread name: | Emb1-C0005186_G17 |
| Conread position: | 4-414 |
| Cow position: | chr19:14960133-14959722 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 5-318 |
| Cow position: | chr19:14940753-14941069 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 5-420 |
| Cow position: | chr19:20678296-20678714 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 5-430 |
| Cow position: | chr19:43570215-43569787 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 112, 204 |
| Conread position: | 5-432 |
| Cow position: | chr19:14940585-14941015 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 276 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 112, 260 |
| Conread position: | 5-433 |
| Cow position: | chr19:14960214-14959787 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 112, 64 |
| Conread position: | 5-434 |
| Cow position: | chr19:23649563-23649995 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 112, 236 |
| Conread position: | 5-435 |
| Cow position: | chr19:20635456-20635023 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 112, 372 |
| Conread position: | 5-435 |
| Cow position: | chr19:23613693-23614126 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 112, 214 |
| Conread position: | 5-438 |
| Cow position: | chr19:14960298-14959865 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 101, 149 |
| Conread position: | 5-441 |
| Cow position: | chr19:43570131-43569694 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 114, 399 |
| Conread position: | 5-443 |
| Cow position: | chr19:14939997-14940438 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 5-443 |
| Cow position: | chr19:14940166-14940606 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 5 |
| Conread position: | 5-443 |
| Cow position: | chr19:14940333-14940774 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 89 |
| Conread position: | 5-443 |
| Cow position: | chr19:14940501-14940942 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 117, 228 |
| Conread position: | 5-443 |
| Cow position: | chr19:20677456-20677897 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 124 |
| Conread position: | 5-443 |
| Cow position: | chr19:23597206-23597647 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-443 |
| Cow position: | chr19:23613441-23613882 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 5-443 |
| Cow position: | chr19:23613525-23613966 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 138, 365 |
| Conread position: | 5-443 |
| Cow position: | chr19:23613609-23614050 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 5-443 |
| Cow position: | chr19:23613861-23614302 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 283 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 112, 151 |
| Conread position: | 5-443 |
| Cow position: | chr19:23614029-23614470 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 114, 240 |
| Conread position: | 5-443 |
| Cow position: | chr19:23614197-23614638 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 5-443 |
| Cow position: | chr19:23614281-23614722 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 114, 361 |
| Conread position: | 5-443 |
| Cow position: | chr19:23614533-23614974 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 119, 238 |
| Conread position: | 5-443 |
| Cow position: | chr19:23614617-23615058 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 114, 202 |
| Conread position: | 5-443 |
| Cow position: | chr19:23649815-23650256 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 6-441 |
| Cow position: | chr19:23649396-23649834 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 98, 109 |
| Conread position: | 7-435 |
| Cow position: | chr19:23649901-23650332 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 264 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 8-443 |
| Cow position: | chr19:14960379-14959943 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 226 |
| Conread position: | 8-443 |
| Cow position: | chr19:20678215-20678653 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 145, 370 |
| Conread position: | 9-434 |
| Cow position: | chr19:14915974-14916399 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 9-435 |
| Cow position: | chr19:14940421-14940850 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 12-443 |
| Cow position: | chr19:20635701-20635267 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 16-443 |
| Cow position: | chr19:23613956-23614386 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 115, 107 |
| Conread position: | 35-443 |
| Cow position: | chr19:43570266-43569858 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 82, 19 |
| Conread position: | 42-443 |
| Cow position: | chr19:23596826-23597227 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 138 |
| Conread position: | 42-443 |
| Cow position: | chr19:43570336-43569942 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 56-443 |
| Cow position: | chr19:14948490-14948101 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 57-443 |
| Cow position: | chr19:23614501-23614890 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 87, 151 |
| Conread position: | 62-415 |
| Cow position: | chr19:14959176-14958826 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 320, 58 |
| Conread position: | 79-434 |
| Cow position: | chr19:23613349-23613705 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 80-443 |
| Cow position: | chr19:14960473-14960111 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 80-443 |
| Cow position: | chr19:20678119-20678485 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 37, 220 |
| Conread position: | 81-419 |
| Cow position: | chr19:23614777-23615118 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 296 |
| Conread position: | 113-433 |
| Cow position: | chr19:23614474-23614796 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 118-443 |
| Cow position: | chr19:14959201-14958882 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 128-423 |
| Cow position: | chr19:14948332-14948037 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 246, 257 |
| Conread position: | 128-443 |
| Cow position: | chr19:20677666-20677981 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 183, 179 |
| Conread position: | 128-443 |
| Cow position: | chr19:23649437-23649752 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 112 |
| Conread position: | 133-443 |
| Cow position: | chr19:20677839-20678149 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 183, 155 |
| Conread position: | 140-432 |
| Cow position: | chr19:20677762-20678054 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 230, 248 |
| Conread position: | 141-441 |
| Cow position: | chr19:14959671-14959373 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 143-428 |
| Cow position: | chr19:23650124-23650409 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 143-443 |
| Cow position: | chr19:23597179-23597479 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-443 |
| Cow position: | chr19:23649620-23649920 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-443 |
| Cow position: | chr19:23649788-23650086 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 144-432 |
| Cow position: | chr19:43570398-43570121 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 148-443 |
| Cow position: | chr19:23649289-23649584 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 92 |
| Conread position: | 155-443 |
| Cow position: | chr19:14948470-14948185 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 155-443 |
| Cow position: | chr19:20635471-20635183 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 227, 219 |
| Conread position: | 159-443 |
| Cow position: | chr19:14939986-14940270 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 134, 128 |
| Conread position: | 166-435 |
| Cow position: | chr19:23613353-23613622 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 221, 194 |
| Conread position: | 167-432 |
| Cow position: | chr19:14959236-14958977 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 182-443 |
| Cow position: | chr19:14959305-14959050 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 200-433 |
| Cow position: | chr19:14960436-14960203 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 97, 92 |
| Conread position: | 216-443 |
| Cow position: | chr19:14959680-14959455 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 82, 28 |
| Conread position: | 231-443 |
| Cow position: | chr19:20677602-20677813 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 143, 7 |
| Conread position: | 243-443 |
| Cow position: | chr19:14960477-14960277 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 139, 133 |
| Conread position: | 247-443 |
| Cow position: | chr19:23613350-23613546 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.