Cow genome map
| Conread name: | Emb1-C0005186_G17 |
| Conread position: | 5-375 |
| Cow position: | chr23:25660326-25660699 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 5-396 |
| Cow position: | chr23:24522561-24522167 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 259 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 5-408 |
| Cow position: | chr23:24547071-24546665 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 5-421 |
| Cow position: | chr23:24560547-24560128 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 5-421 |
| Cow position: | chr23:25626622-25627041 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 120, 202 |
| Conread position: | 5-433 |
| Cow position: | chr23:24547239-24546808 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 5-433 |
| Cow position: | chr23:25626457-25626885 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 74, 89 |
| Conread position: | 5-439 |
| Cow position: | chr23:24535954-24535517 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 112, 208 |
| Conread position: | 5-443 |
| Cow position: | chr23:24547155-24546714 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 5-443 |
| Cow position: | chr23:24560631-24560190 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 5-443 |
| Cow position: | chr23:24560799-24560358 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 82, 68 |
| Conread position: | 5-443 |
| Cow position: | chr23:24639475-24639916 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 5-443 |
| Cow position: | chr23:24639559-24640000 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 5-443 |
| Cow position: | chr23:25626121-25626562 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 70, 42 |
| Conread position: | 5-443 |
| Cow position: | chr23:25660242-25660683 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 117, 144 |
| Conread position: | 6-443 |
| Cow position: | chr23:24522725-24522288 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 8-414 |
| Cow position: | chr23:24535867-24535458 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 8-433 |
| Cow position: | chr23:25626208-25626633 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 8-435 |
| Cow position: | chr23:25626544-25626971 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 109, 39 |
| Conread position: | 8-443 |
| Cow position: | chr23:24547320-24546882 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 9-435 |
| Cow position: | chr23:24626319-24626746 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 403 |
| Conread position: | 13-442 |
| Cow position: | chr23:25625961-25626393 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 269 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 108, 122 |
| Conread position: | 16-443 |
| Cow position: | chr23:24536027-24535597 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 101, 197 |
| Conread position: | 16-443 |
| Cow position: | chr23:24639318-24639748 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 17-441 |
| Cow position: | chr23:25660170-25660597 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 274 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 99, 205 |
| Conread position: | 18-431 |
| Cow position: | chr23:25724107-25723692 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 47 |
| Conread position: | 18-443 |
| Cow position: | chr23:24639236-24639664 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 107, 195 |
| Conread position: | 22-443 |
| Cow position: | chr23:24626251-24626672 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 101, 8 |
| Conread position: | 80-443 |
| Cow position: | chr23:24522570-24522204 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 37, 210 |
| Conread position: | 122-443 |
| Cow position: | chr23:25625989-25626310 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 110, 118 |
| Conread position: | 128-431 |
| Cow position: | chr23:24654082-24654385 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-443 |
| Cow position: | chr23:24535996-24535681 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 129, 103 |
| Conread position: | 128-443 |
| Cow position: | chr23:25660200-25660515 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 104, 112 |
| Conread position: | 128-443 |
| Cow position: | chr23:25724078-25723763 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 85, 80 |
| Conread position: | 141-443 |
| Cow position: | chr23:25626428-25626727 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 108, 91 |
| Conread position: | 183-443 |
| Cow position: | chr23:24654053-24654313 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-443 |
| Cow position: | chr23:25625966-25626226 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-443 |
| Cow position: | chr23:25724107-25723847 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 125, 109 |
| Conread position: | 191-443 |
| Cow position: | chr23:25660180-25660431 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 180, 17 |
| Conread position: | 242-442 |
| Cow position: | chr23:24521983-24521783 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 243-442 |
| Cow position: | chr23:24547334-24547135 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 261-443 |
| Cow position: | chr23:24654047-24654229 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.