Cow genome map
| Conread name: | Emb1-C0005186_G17 |
| Conread position: | 3-443 |
| Cow position: | chr28:9252773-9253214 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 5-410 |
| Cow position: | chr28:7757926-7758336 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 266 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-418 |
| Cow position: | chr28:33210234-33210653 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 5-419 |
| Cow position: | chr28:7758414-7758832 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 112, 365 |
| Conread position: | 5-421 |
| Cow position: | chr28:9253193-9253612 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 5-433 |
| Cow position: | chr28:9298740-9299168 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 80 |
| Conread position: | 5-435 |
| Cow position: | chr28:9253109-9253542 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 5-443 |
| Cow position: | chr28:7757590-7758031 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 5-443 |
| Cow position: | chr28:7757674-7758115 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 5-443 |
| Cow position: | chr28:7757843-7758283 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 5 |
| Conread position: | 5-443 |
| Cow position: | chr28:7810438-7810870 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 5-443 |
| Cow position: | chr28:9252941-9253382 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 207 |
| Conread position: | 5-443 |
| Cow position: | chr28:9290178-9290613 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 31 |
| Conread position: | 5-443 |
| Cow position: | chr28:9298823-9299248 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 112, 172 |
| Conread position: | 8-443 |
| Cow position: | chr28:9299076-9299500 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 282 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 9-432 |
| Cow position: | chr28:7758334-7758760 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 10-443 |
| Cow position: | chr28:7757343-7757779 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 10-443 |
| Cow position: | chr28:9298412-9298844 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 289 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 133, 86 |
| Conread position: | 12-443 |
| Cow position: | chr28:7757513-7757947 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 432 |
| Conread position: | 14-443 |
| Cow position: | chr28:7757185-7757611 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 136 |
| Conread position: | 19-431 |
| Cow position: | chr28:9290272-9290685 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 192 |
| Conread position: | 19-443 |
| Cow position: | chr28:9253039-9253466 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 62-435 |
| Cow position: | chr28:7810570-7810946 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 62-443 |
| Cow position: | chr28:9289819-9290199 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 235, 73 |
| Conread position: | 62-443 |
| Cow position: | chr28:9290067-9290446 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 53, 141 |
| Conread position: | 90-422 |
| Cow position: | chr28:9299228-9299563 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 120-436 |
| Cow position: | chr28:34679520-34679201 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 192, 139 |
| Conread position: | 125-443 |
| Cow position: | chr28:7810309-7810618 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 142-443 |
| Cow position: | chr28:9298630-9298928 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 143-435 |
| Cow position: | chr28:7758387-7758679 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-433 |
| Cow position: | chr28:9289982-9290269 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 52 |
| Conread position: | 159-443 |
| Cow position: | chr28:33210223-33210507 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 81 |
| Conread position: | 173-433 |
| Cow position: | chr28:34673364-34673624 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 174-443 |
| Cow position: | chr28:7758334-7758603 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-439 |
| Cow position: | chr28:7810283-7810539 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-434 |
| Cow position: | chr28:33210338-33210583 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 243-443 |
| Cow position: | chr28:11333890-11333690 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 49 |
| Conread position: | 268-443 |
| Cow position: | chr28:7810284-7810459 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-443 |
| Cow position: | chr28:34673376-34673550 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.