Cow genome map
| Conread name: | Emb1-C0005186_G17 |
| Conread position: | 5-401 |
| Cow position: | chr3:62721983-62721584 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 116, 195 |
| Conread position: | 5-435 |
| Cow position: | chr3:62722067-62721634 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 37, 46 |
| Conread position: | 5-435 |
| Cow position: | chr3:62742285-62742714 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 68, 82 |
| Conread position: | 5-443 |
| Cow position: | chr3:62722151-62721712 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 46, 56 |
| Conread position: | 5-443 |
| Cow position: | chr3:62722235-62721794 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 5-443 |
| Cow position: | chr3:68045776-68046216 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 116, 5 |
| Conread position: | 5-443 |
| Cow position: | chr3:77351067-77350636 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 25 |
| Conread position: | 6-423 |
| Cow position: | chr3:62742621-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 107, 19 |
| Conread position: | 7-436 |
| Cow position: | chr3:62742454-62742881 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 8-443 |
| Cow position: | chr3:62742539-62742973 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 347, 209 |
| Conread position: | 10-434 |
| Cow position: | chr3:68027019-68027446 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 13-443 |
| Cow position: | chr3:68045867-68046300 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 17-381 |
| Cow position: | chr3:62743110-62743477 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 19-420 |
| Cow position: | chr3:62743033-62743432 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 44-443 |
| Cow position: | chr3:68026969-68027371 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 30 |
| Conread position: | 44-443 |
| Cow position: | chr3:68045562-68045964 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 73, 134 |
| Conread position: | 122-443 |
| Cow position: | chr3:62722367-62722046 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 72, 91 |
| Conread position: | 124-434 |
| Cow position: | chr3:68045728-68046039 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 128-435 |
| Cow position: | chr3:62722277-62721970 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 86, 80 |
| Conread position: | 138-443 |
| Cow position: | chr3:62742253-62742557 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 101, 86 |
| Conread position: | 138-443 |
| Cow position: | chr3:62743071-62743371 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 242, 39 |
| Conread position: | 141-369 |
| Cow position: | chr3:68027489-68027717 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-443 |
| Cow position: | chr3:68027405-68027707 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-419 |
| Cow position: | chr3:68046084-68046358 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 258, 0 |
Show alignments to all cow chromosomes.