Cow genome map
| Conread name: | Emb1-C0005186_G17 | 
| Conread position: | 5-435 | 
| Cow position: | chr6:49340998-49341431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 52 | 
| Conread position: | 5-443 | 
| Cow position: | chr6:49340494-49340935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 52 | 
| Conread position: | 5-443 | 
| Cow position: | chr6:49340830-49341271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 52 | 
| Conread position: | 5-443 | 
| Cow position: | chr6:49340915-49341355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 5 | 
| Conread position: | 140-443 | 
| Cow position: | chr6:49340382-49340683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 247, 19 | 
| Conread position: | 140-443 | 
| Cow position: | chr6:49396107-49396404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 81, 99 | 
| Conread position: | 142-443 | 
| Cow position: | chr6:49340466-49340767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 243, 236 | 
| Conread position: | 142-443 | 
| Cow position: | chr6:49340718-49341019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 158, 151 | 
| Conread position: | 143-443 | 
| Cow position: | chr6:49396194-49396488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 233-443 | 
| Cow position: | chr6:49340389-49340599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 291-443 | 
| Cow position: | chr6:49340363-49340515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
