Cow genome map
| Conread name: | Emb1-C0005186_G17 |
| Conread position: | 4-443 |
| Cow position: | chr7:42879355-42878913 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 82 |
| Conread position: | 5-369 |
| Cow position: | chr7:8325747-8326114 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 5-377 |
| Cow position: | chr7:18390420-18390795 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 112, 305 |
| Conread position: | 5-422 |
| Cow position: | chr7:3180375-3180795 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 116, 146 |
| Conread position: | 5-430 |
| Cow position: | chr7:18390336-18390764 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-430 |
| Cow position: | chr7:42878682-42878251 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-433 |
| Cow position: | chr7:42878850-42878419 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-434 |
| Cow position: | chr7:1015029-1015460 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 114, 184 |
| Conread position: | 5-434 |
| Cow position: | chr7:42879102-42878670 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 372 |
| Conread position: | 5-435 |
| Cow position: | chr7:3179871-3180304 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 5-443 |
| Cow position: | chr7:1014777-1015218 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 121, 217 |
| Conread position: | 5-443 |
| Cow position: | chr7:3180039-3180480 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-443 |
| Cow position: | chr7:3180291-3180732 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 138, 226 |
| Conread position: | 5-443 |
| Cow position: | chr7:8324739-8325180 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 41 |
| Conread position: | 5-443 |
| Cow position: | chr7:11600929-11600488 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 112, 144 |
| Conread position: | 5-443 |
| Cow position: | chr7:42878934-42878493 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-443 |
| Cow position: | chr7:42879018-42878577 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-443 |
| Cow position: | chr7:42879186-42878745 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 6-370 |
| Cow position: | chr7:1439898-1440264 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 7-443 |
| Cow position: | chr7:3179705-3180144 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 8-443 |
| Cow position: | chr7:1014948-1015386 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 258 |
| Conread position: | 8-443 |
| Cow position: | chr7:1438092-1438528 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 108, 91 |
| Conread position: | 8-443 |
| Cow position: | chr7:1439817-1440253 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 52 |
| Conread position: | 9-443 |
| Cow position: | chr7:1014115-1014552 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 9-443 |
| Cow position: | chr7:11601177-11600740 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 12-443 |
| Cow position: | chr7:1439483-1439918 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 112, 156 |
| Conread position: | 42-378 |
| Cow position: | chr7:1014232-1014570 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 330 |
| Conread position: | 53-443 |
| Cow position: | chr7:1014742-1015134 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 64, 8 |
| Conread position: | 59-434 |
| Cow position: | chr7:1438309-1438687 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 64-443 |
| Cow position: | chr7:1014668-1015050 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 52, 326 |
| Conread position: | 69-441 |
| Cow position: | chr7:8278002-8278377 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 78, 59 |
| Conread position: | 78-414 |
| Cow position: | chr7:11600772-11600432 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 133 |
| Conread position: | 124-427 |
| Cow position: | chr7:42878644-42878341 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-443 |
| Cow position: | chr7:3180249-3180564 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 129-443 |
| Cow position: | chr7:3179914-3180228 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 132-443 |
| Cow position: | chr7:3179749-3180060 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 132-443 |
| Cow position: | chr7:18390214-18390525 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 64, 78 |
| Conread position: | 133-370 |
| Cow position: | chr7:1438470-1438707 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 133-443 |
| Cow position: | chr7:18390047-18390357 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 89 |
| Conread position: | 139-433 |
| Cow position: | chr7:42879385-42879091 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-442 |
| Cow position: | chr7:11601210-11600909 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 156, 150 |
| Conread position: | 141-443 |
| Cow position: | chr7:18390391-18390693 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-435 |
| Cow position: | chr7:1438311-1438604 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 142-443 |
| Cow position: | chr7:8277910-8278211 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 86 |
| Conread position: | 226-443 |
| Cow position: | chr7:1439448-1439663 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 232-443 |
| Cow position: | chr7:8325305-8325516 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 232-443 |
| Cow position: | chr7:8325389-8325600 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 232-443 |
| Cow position: | chr7:8325893-8326104 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 160, 144 |
| Conread position: | 241-443 |
| Cow position: | chr7:16643306-16643508 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 245-443 |
| Cow position: | chr7:11601190-11600992 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 135, 129 |
| Conread position: | 247-443 |
| Cow position: | chr7:8324816-8325012 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 48 |
Show alignments to all cow chromosomes.