Cow genome map
| Conread name: | Emb1-C0005186_P05 |
| Conread position: | 1-145 |
| Cow position: | chr12:23644879-23644734 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:45820444-45820297 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-148 |
| Cow position: | chr12:30819168-30819316 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-203 |
| Cow position: | chr12:33323573-33323371 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 1-218 |
| Cow position: | chr12:25917349-25917138 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 57 |
| Conread position: | 1-222 |
| Cow position: | chr12:24663038-24663262 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 1-227 |
| Cow position: | chr12:22285195-22284974 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 5 |
| Conread position: | 1-227 |
| Cow position: | chr12:37255945-37256165 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 171, 54 |
| Conread position: | 1-228 |
| Cow position: | chr12:4768850-4769067 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 83 |
| Conread position: | 1-228 |
| Cow position: | chr12:17031539-17031756 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 1-229 |
| Cow position: | chr12:47267385-47267159 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 1-230 |
| Cow position: | chr12:9766951-9766731 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-230 |
| Cow position: | chr12:35771095-35770874 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-230 |
| Cow position: | chr12:38774316-38774095 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-231 |
| Cow position: | chr12:5554408-5554186 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-231 |
| Cow position: | chr12:17879375-17879154 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-231 |
| Cow position: | chr12:19261120-19261346 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 164, 145 |
| Conread position: | 1-231 |
| Cow position: | chr12:23939151-23939370 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-231 |
| Cow position: | chr12:32169467-32169697 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 146, 7 |
| Conread position: | 1-231 |
| Cow position: | chr12:37008780-37008559 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 1-231 |
| Cow position: | chr12:44622280-44622511 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 146, 73 |
| Conread position: | 1-236 |
| Cow position: | chr12:26777265-26777038 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 1-249 |
| Cow position: | chr12:37514359-37514120 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 139 |
| Conread position: | 1-253 |
| Cow position: | chr12:7110122-7110379 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 138, 238 |
| Conread position: | 1-255 |
| Cow position: | chr12:40910362-40910110 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 1-259 |
| Cow position: | chr12:42966924-42967173 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 1-266 |
| Cow position: | chr12:18583069-18582813 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 2-230 |
| Cow position: | chr12:33851287-33851506 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 2-231 |
| Cow position: | chr12:18514002-18513775 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 3-136 |
| Cow position: | chr12:3092654-3092520 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-145 |
| Cow position: | chr12:24273432-24273288 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 3-231 |
| Cow position: | chr12:26217897-26217676 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 3-237 |
| Cow position: | chr12:4866742-4866972 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 145 |
| Conread position: | 3-254 |
| Cow position: | chr12:5135162-5135404 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 166, 14 |
| Conread position: | 3-256 |
| Cow position: | chr12:13988297-13988552 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 3-260 |
| Cow position: | chr12:29675212-29674960 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 32 |
| Conread position: | 4-203 |
| Cow position: | chr12:41159520-41159713 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-259 |
| Cow position: | chr12:10942215-10942475 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 156, 244 |
| Conread position: | 5-228 |
| Cow position: | chr12:42749369-42749591 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 104, 67 |
| Conread position: | 5-255 |
| Cow position: | chr12:18388361-18388112 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 5-255 |
| Cow position: | chr12:26750022-26749775 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 6-230 |
| Cow position: | chr12:30745650-30745866 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 6-231 |
| Cow position: | chr12:5714560-5714769 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:12232813-12233032 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 70 |
| Conread position: | 6-231 |
| Cow position: | chr12:33948836-33949051 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 6-259 |
| Cow position: | chr12:12300847-12301104 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 7-229 |
| Cow position: | chr12:18563093-18563311 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 108 |
| Conread position: | 7-230 |
| Cow position: | chr12:5635522-5635302 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 7-231 |
| Cow position: | chr12:18123600-18123817 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 7-231 |
| Cow position: | chr12:31883271-31883497 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 148, 38 |
| Conread position: | 7-232 |
| Cow position: | chr12:15089447-15089668 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 7-254 |
| Cow position: | chr12:37170015-37169775 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 8-142 |
| Cow position: | chr12:19507568-19507703 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 8-145 |
| Cow position: | chr12:27357321-27357456 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 8-153 |
| Cow position: | chr12:15641176-15641030 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-165 |
| Cow position: | chr12:6485278-6485124 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 8-174 |
| Cow position: | chr12:15530990-15531152 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 8-228 |
| Cow position: | chr12:46120902-46120668 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-230 |
| Cow position: | chr12:11056807-11057016 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 90, 137 |
| Conread position: | 8-230 |
| Cow position: | chr12:11587705-11587919 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 119 |
| Conread position: | 8-230 |
| Cow position: | chr12:15429664-15429447 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 158, 135 |
| Conread position: | 8-230 |
| Cow position: | chr12:44203052-44202844 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 171, 47 |
| Conread position: | 8-250 |
| Cow position: | chr12:42685013-42684773 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 8-251 |
| Cow position: | chr12:1998867-1998629 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 8-254 |
| Cow position: | chr12:16670199-16670444 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 224, 118 |
| Conread position: | 8-255 |
| Cow position: | chr12:25561302-25561542 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 231, 73 |
| Conread position: | 9-145 |
| Cow position: | chr12:25177663-25177529 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 9-231 |
| Cow position: | chr12:20776989-20776778 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 9-231 |
| Cow position: | chr12:45092378-45092591 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 6, 138 |
| Conread position: | 9-260 |
| Cow position: | chr12:7902872-7902626 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 138 |
| Conread position: | 10-143 |
| Cow position: | chr12:9229566-9229433 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-164 |
| Cow position: | chr12:15240804-15240647 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 105, 120 |
| Conread position: | 10-168 |
| Cow position: | chr12:15260696-15260854 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 5, 121 |
| Conread position: | 10-228 |
| Cow position: | chr12:36261623-36261842 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 154, 136 |
| Conread position: | 11-230 |
| Cow position: | chr12:6410800-6410586 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 136 |
| Conread position: | 11-231 |
| Cow position: | chr12:18518608-18518823 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 12-145 |
| Cow position: | chr12:33319734-33319599 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 12-203 |
| Cow position: | chr12:30662014-30661826 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 12-231 |
| Cow position: | chr12:17080196-17080417 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 12-231 |
| Cow position: | chr12:33976135-33976354 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 148, 133 |
| Conread position: | 13-231 |
| Cow position: | chr12:36544705-36544494 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 43, 6 |
| Conread position: | 14-145 |
| Cow position: | chr12:39465517-39465648 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-146 |
| Cow position: | chr12:5905994-5906126 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-160 |
| Cow position: | chr12:30170607-30170753 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 14-170 |
| Cow position: | chr12:6139643-6139488 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 39, 138 |
| Conread position: | 14-170 |
| Cow position: | chr12:27037512-27037361 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 14-171 |
| Cow position: | chr12:26151522-26151370 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 14-174 |
| Cow position: | chr12:32714984-32715141 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 14-181 |
| Cow position: | chr12:19274459-19274295 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 14-215 |
| Cow position: | chr12:37770815-37771001 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 14-224 |
| Cow position: | chr12:6720263-6720492 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 14-229 |
| Cow position: | chr12:6241257-6241473 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 14-231 |
| Cow position: | chr12:19502490-19502263 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 14-231 |
| Cow position: | chr12:24167006-24166798 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 14-231 |
| Cow position: | chr12:45039045-45039258 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 48, 135 |
| Conread position: | 14-235 |
| Cow position: | chr12:37993794-37993568 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 146, 191 |
| Conread position: | 14-247 |
| Cow position: | chr12:15389009-15389236 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 14-250 |
| Cow position: | chr12:34029189-34028956 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 14-250 |
| Cow position: | chr12:38155133-38154899 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 123, 112 |
| Conread position: | 14-255 |
| Cow position: | chr12:7884743-7884505 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 14-255 |
| Cow position: | chr12:35368580-35368818 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 14-256 |
| Cow position: | chr12:48415574-48415345 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 14-259 |
| Cow position: | chr12:6188176-6187928 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 141, 232 |
| Conread position: | 14-259 |
| Cow position: | chr12:15703559-15703316 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 226, 65 |
| Conread position: | 14-259 |
| Cow position: | chr12:24032434-24032665 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 14-260 |
| Cow position: | chr12:11659866-11660105 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 146, 84 |
| Conread position: | 14-260 |
| Cow position: | chr12:16605735-16605492 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 132 |
| Conread position: | 14-263 |
| Cow position: | chr12:4719885-4720129 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 218, 112 |
| Conread position: | 14-263 |
| Cow position: | chr12:17252260-17252023 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 15-225 |
| Cow position: | chr12:5839717-5839516 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 99, 132 |
| Conread position: | 15-230 |
| Cow position: | chr12:25805190-25804995 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 15-230 |
| Cow position: | chr12:30590703-30590919 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 134 |
| Conread position: | 15-230 |
| Cow position: | chr12:42879633-42879849 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 139, 120 |
| Conread position: | 15-264 |
| Cow position: | chr12:9143327-9143566 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 15-267 |
| Cow position: | chr12:18020797-18021068 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 66 |
| Conread position: | 16-228 |
| Cow position: | chr12:12637243-12637037 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 16-231 |
| Cow position: | chr12:14222922-14223134 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 16-231 |
| Cow position: | chr12:24181089-24181294 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 16-231 |
| Cow position: | chr12:30210423-30210621 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 17-232 |
| Cow position: | chr12:3371601-3371396 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 18-231 |
| Cow position: | chr12:26575838-26576043 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 18-269 |
| Cow position: | chr12:17269744-17269995 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 208, 128 |
| Conread position: | 19-145 |
| Cow position: | chr12:19691288-19691165 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 19-230 |
| Cow position: | chr12:43974236-43974442 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 20-212 |
| Cow position: | chr12:4008339-4008148 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 147, 18 |
| Conread position: | 21-230 |
| Cow position: | chr12:1889632-1889430 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 21-230 |
| Cow position: | chr12:29057334-29057540 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 21-231 |
| Cow position: | chr12:42181184-42180977 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 25-229 |
| Cow position: | chr12:15122273-15122474 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 26-154 |
| Cow position: | chr12:30605215-30605088 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 26-231 |
| Cow position: | chr12:2734958-2734760 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 28-231 |
| Cow position: | chr12:26147218-26147017 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 28-231 |
| Cow position: | chr12:43854846-43855041 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 28-260 |
| Cow position: | chr12:23714627-23714852 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 29-238 |
| Cow position: | chr12:24437682-24437474 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 154, 117 |
| Conread position: | 31-229 |
| Cow position: | chr12:48578798-48578984 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 31-231 |
| Cow position: | chr12:14986704-14986898 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 38-231 |
| Cow position: | chr12:29316501-29316311 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 5, 115 |
| Conread position: | 40-231 |
| Cow position: | chr12:31841533-31841721 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 144, 108 |
| Conread position: | 41-238 |
| Cow position: | chr12:29731279-29731469 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 41-248 |
| Cow position: | chr12:20355178-20355391 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 41-255 |
| Cow position: | chr12:6480605-6480814 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 130, 110 |
| Conread position: | 42-256 |
| Cow position: | chr12:2964016-2964223 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 197, 30 |
| Conread position: | 42-256 |
| Cow position: | chr12:29180639-29180851 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 43-237 |
| Cow position: | chr12:1952834-1952648 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 43-259 |
| Cow position: | chr12:39150085-39149868 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 117, 83 |
| Conread position: | 45-260 |
| Cow position: | chr12:44861291-44861074 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 185, 101 |
| Conread position: | 52-228 |
| Cow position: | chr12:20439281-20439114 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 52-231 |
| Cow position: | chr12:4512474-4512300 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 58-260 |
| Cow position: | chr12:30042707-30042906 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 59-255 |
| Cow position: | chr12:23446704-23446891 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 60-231 |
| Cow position: | chr12:38679033-38679199 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 60-257 |
| Cow position: | chr12:25528576-25528384 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 179, 86 |
| Conread position: | 60-259 |
| Cow position: | chr12:6958203-6958396 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 60-260 |
| Cow position: | chr12:43551238-43551037 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 74, 182 |
| Conread position: | 63-252 |
| Cow position: | chr12:33129241-33129426 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 64-260 |
| Cow position: | chr12:583522-583321 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 67-231 |
| Cow position: | chr12:4014442-4014271 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 68-230 |
| Cow position: | chr12:4008095-4007933 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 76 |
| Conread position: | 70-269 |
| Cow position: | chr12:17254135-17254334 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 77-232 |
| Cow position: | chr12:29762249-29762091 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 88-239 |
| Cow position: | chr12:40435031-40434884 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 89-225 |
| Cow position: | chr12:29358050-29357920 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.