Cow genome map

Conread name: Emb1-C0005186_P05

Conread position: 1-138
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-139
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 1-159
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 7

Conread position: 1-163
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 123, 23

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 1-225
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 109, 147

Conread position: 1-228
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 180, 93

Conread position: 1-231
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 40

Conread position: 1-231
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 162

Conread position: 1-231
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 5

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 21

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 1-254
Cow position:
Alignm length: 261
Alignm identity: 175
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 160, 35

Conread position: 1-255
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 40

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-258
Cow position:
Alignm length: 258
Alignm identity: 184
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 1-260
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 153, 0

Conread position: 1-261
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-262
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 161, 23

Conread position: 2-140
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 2-222
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 2-230
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 117

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-174
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 3-257
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 193, 78

Conread position: 4-145
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-145
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 4-203
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 4-231
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 136

Conread position: 4-259
Cow position:
Alignm length: 258
Alignm identity: 185
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 229, 8

Conread position: 4-260
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 147

Conread position: 5-168
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 5-225
Cow position:
Alignm length: 221
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 5-231
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 150, 7

Conread position: 6-230
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 149, 23

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 91, 0

Conread position: 6-231
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 156, 138

Conread position: 6-232
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 94

Conread position: 6-260
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 110

Conread position: 7-139
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 7-203
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 139

Conread position: 7-231
Cow position:
Alignm length: 226
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 11

Conread position: 7-231
Cow position:
Alignm length: 226
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 109

Conread position: 8-201
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 8-204
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 69

Conread position: 8-225
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 143, 0

Conread position: 8-230
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 7, 37

Conread position: 8-231
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 151, 0

Conread position: 8-231
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 114

Conread position: 8-231
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 0

Conread position: 8-231
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 124

Conread position: 8-250
Cow position:
Alignm length: 243
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 8-261
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 103, 81

Conread position: 9-230
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 9-231
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 148, 15

Conread position: 9-238
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 65, 12

Conread position: 10-230
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 160, 110

Conread position: 11-231
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 11-231
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 196, 98

Conread position: 11-261
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 221, 8

Conread position: 12-143
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 12-224
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 0

Conread position: 12-225
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 190, 132

Conread position: 12-231
Cow position:
Alignm length: 220
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 12-231
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 159, 45

Conread position: 12-260
Cow position:
Alignm length: 249
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 12-260
Cow position:
Alignm length: 253
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 154, 113

Conread position: 12-260
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 146, 108

Conread position: 13-231
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 133, 0

Conread position: 13-260
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 14-142
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 14-143
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 14-145
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 14-145
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 14-145
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 14-201
Cow position:
Alignm length: 188
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 14-224
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 132

Conread position: 14-225
Cow position:
Alignm length: 212
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 14-225
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 132, 0

Conread position: 14-228
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 173, 134

Conread position: 14-229
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 132, 0

Conread position: 14-231
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 54

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 14-231
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 103

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 0

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 121, 0

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 132, 0

Conread position: 14-238
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 146, 0

Conread position: 14-250
Cow position:
Alignm length: 239
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 160, 87

Conread position: 14-250
Cow position:
Alignm length: 237
Alignm identity: 157
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 14-252
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 138, 0

Conread position: 14-254
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 132, 0

Conread position: 14-255
Cow position:
Alignm length: 242
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 14-257
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 212, 25

Conread position: 14-260
Cow position:
Alignm length: 247
Alignm identity: 164
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 14-261
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 225, 132

Conread position: 15-145
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 94, 99

Conread position: 15-148
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 15-229
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 15-230
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 191, 125

Conread position: 15-259
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 235, 131

Conread position: 15-276
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 16-145
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 16-229
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 130, 0

Conread position: 16-230
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 113, 129

Conread position: 17-201
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 60

Conread position: 17-231
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 0

Conread position: 21-231
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 65

Conread position: 22-260
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 22-273
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 131

Conread position: 23-231
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 184, 123

Conread position: 25-230
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 25-231
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 29-229
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 30-231
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 177, 112

Conread position: 31-231
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 34-214
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 36-231
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 78

Conread position: 37-225
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 41-231
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 113

Conread position: 41-232
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 41-263
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 5

Conread position: 49-231
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 49-231
Cow position:
Alignm length: 183
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 50-225
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 98

Conread position: 60-230
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 57

Conread position: 60-231
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 135, 86

Conread position: 60-231
Cow position:
Alignm length: 172
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 60-251
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 63-155
Cow position:
Alignm length: 93
Alignm identity: 78
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 63-252
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 84, 173

Conread position: 65-171
Cow position:
Alignm length: 109
Alignm identity: 94
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 65-283
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 67-231
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 0

Show alignments to all cow chromosomes.