Cow genome map
| Conread name: | Emb1-C0005186_P05 |
| Conread position: | 1-142 |
| Cow position: | chr27:4812892-4813033 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 134, 6 |
| Conread position: | 1-142 |
| Cow position: | chr27:20553720-20553584 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-188 |
| Cow position: | chr27:26959619-26959804 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 148 |
| Conread position: | 1-220 |
| Cow position: | chr27:21669124-21669334 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 194, 131 |
| Conread position: | 1-225 |
| Cow position: | chr27:19685721-19685937 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-228 |
| Cow position: | chr27:13317980-13318207 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 118 |
| Conread position: | 1-230 |
| Cow position: | chr27:6541625-6541403 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 1-230 |
| Cow position: | chr27:10307306-10307535 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 1-230 |
| Cow position: | chr27:17397461-17397683 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 1-230 |
| Cow position: | chr27:25152078-25151857 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 6 |
| Conread position: | 1-231 |
| Cow position: | chr27:23485202-23484983 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-232 |
| Cow position: | chr27:29831704-29831942 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 1-254 |
| Cow position: | chr27:23560039-23560285 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-259 |
| Cow position: | chr27:6241199-6241454 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 1-260 |
| Cow position: | chr27:26433813-26434078 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 1-260 |
| Cow position: | chr27:30915003-30914745 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 1-263 |
| Cow position: | chr27:590772-591028 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 146, 6 |
| Conread position: | 1-264 |
| Cow position: | chr27:31210539-31210288 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 2-145 |
| Cow position: | chr27:1123021-1122881 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-225 |
| Cow position: | chr27:19660924-19660701 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-228 |
| Cow position: | chr27:12425280-12425058 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 3-231 |
| Cow position: | chr27:7412384-7412161 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 3-231 |
| Cow position: | chr27:31169117-31169338 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 128 |
| Conread position: | 3-251 |
| Cow position: | chr27:19933064-19932814 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 4-124 |
| Cow position: | chr27:16625887-16625770 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 4-142 |
| Cow position: | chr27:26407172-26407307 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 4-219 |
| Cow position: | chr27:28478571-28478363 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 143 |
| Conread position: | 4-224 |
| Cow position: | chr27:1768634-1768843 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 4-225 |
| Cow position: | chr27:23107915-23108129 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 4-225 |
| Cow position: | chr27:28496382-28496598 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 4-231 |
| Cow position: | chr27:29493908-29494131 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 29, 6 |
| Conread position: | 5-145 |
| Cow position: | chr27:4835616-4835758 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 5-204 |
| Cow position: | chr27:20481376-20481562 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 5-219 |
| Cow position: | chr27:20067988-20068196 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 5-230 |
| Cow position: | chr27:24693398-24693186 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 5-230 |
| Cow position: | chr27:26509169-26509388 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 5-230 |
| Cow position: | chr27:30489421-30489660 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 5-231 |
| Cow position: | chr27:16705249-16705020 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 148 |
| Conread position: | 5-254 |
| Cow position: | chr27:1353570-1353323 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 6-145 |
| Cow position: | chr27:4673004-4672861 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 6-230 |
| Cow position: | chr27:23594311-23594087 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 6-230 |
| Cow position: | chr27:26617393-26617183 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 6-255 |
| Cow position: | chr27:27632613-27632850 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 6-256 |
| Cow position: | chr27:14670394-14670636 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 7-225 |
| Cow position: | chr27:20897038-20897247 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 7-253 |
| Cow position: | chr27:15454195-15453956 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 226, 62 |
| Conread position: | 8-145 |
| Cow position: | chr27:22569770-22569634 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 30 |
| Conread position: | 8-229 |
| Cow position: | chr27:299395-299605 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 8-230 |
| Cow position: | chr27:12459271-12459056 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 8-230 |
| Cow position: | chr27:28206785-28206572 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 8-230 |
| Cow position: | chr27:28931810-28932034 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 122 |
| Conread position: | 8-230 |
| Cow position: | chr27:31386644-31386862 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 141 |
| Conread position: | 8-231 |
| Cow position: | chr27:27740304-27740526 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 111 |
| Conread position: | 8-260 |
| Cow position: | chr27:26437134-26437381 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 8-267 |
| Cow position: | chr27:20629056-20628788 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 9-231 |
| Cow position: | chr27:426954-426737 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 9-231 |
| Cow position: | chr27:29431449-29431243 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 9-260 |
| Cow position: | chr27:28921909-28922156 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 9-260 |
| Cow position: | chr27:29593643-29593890 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 10-143 |
| Cow position: | chr27:22423501-22423367 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 10-230 |
| Cow position: | chr27:26793795-26794016 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 119 |
| Conread position: | 10-235 |
| Cow position: | chr27:17331481-17331257 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 67 |
| Conread position: | 11-231 |
| Cow position: | chr27:7343445-7343661 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 98, 122 |
| Conread position: | 11-231 |
| Cow position: | chr27:15002995-15003212 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 11-238 |
| Cow position: | chr27:27055269-27055056 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 12-205 |
| Cow position: | chr27:24440238-24440429 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 150 |
| Conread position: | 12-224 |
| Cow position: | chr27:26239008-26238798 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 115 |
| Conread position: | 12-232 |
| Cow position: | chr27:23554347-23554563 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 12-259 |
| Cow position: | chr27:30407055-30407305 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 13-143 |
| Cow position: | chr27:20641354-20641482 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 13-228 |
| Cow position: | chr27:8790760-8790972 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 138 |
| Conread position: | 13-230 |
| Cow position: | chr27:23452442-23452231 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 13-231 |
| Cow position: | chr27:18435152-18435363 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 14-145 |
| Cow position: | chr27:8353456-8353328 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 14-170 |
| Cow position: | chr27:16589722-16589877 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 14-225 |
| Cow position: | chr27:12710229-12710015 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 76, 108 |
| Conread position: | 14-225 |
| Cow position: | chr27:27694792-27695002 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 146, 62 |
| Conread position: | 14-225 |
| Cow position: | chr27:29597771-29597972 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 14-228 |
| Cow position: | chr27:6319899-6319693 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 14-230 |
| Cow position: | chr27:22179789-22179998 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 167, 62 |
| Conread position: | 14-230 |
| Cow position: | chr27:26999442-26999655 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 118 |
| Conread position: | 14-231 |
| Cow position: | chr27:4944534-4944739 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 14-231 |
| Cow position: | chr27:10404136-10404350 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 14-231 |
| Cow position: | chr27:10979843-10979627 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 147, 117 |
| Conread position: | 14-238 |
| Cow position: | chr27:15668791-15669014 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 14-248 |
| Cow position: | chr27:23890918-23890683 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 14-255 |
| Cow position: | chr27:16284455-16284232 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 14-255 |
| Cow position: | chr27:26226311-26226544 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 14-259 |
| Cow position: | chr27:30890270-30890043 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 14-265 |
| Cow position: | chr27:11435342-11435592 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 156, 99 |
| Conread position: | 14-266 |
| Cow position: | chr27:5553449-5553204 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 15-218 |
| Cow position: | chr27:6674258-6674048 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 61 |
| Conread position: | 15-229 |
| Cow position: | chr27:27460593-27460809 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 15-232 |
| Cow position: | chr27:19508992-19508778 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 15-252 |
| Cow position: | chr27:20828731-20828957 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 15-255 |
| Cow position: | chr27:19387997-19387764 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 15-260 |
| Cow position: | chr27:29319390-29319143 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 145, 126 |
| Conread position: | 15-265 |
| Cow position: | chr27:2592522-2592269 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 15-267 |
| Cow position: | chr27:15315496-15315252 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 217, 42 |
| Conread position: | 16-143 |
| Cow position: | chr27:20812883-20812756 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-145 |
| Cow position: | chr27:20092856-20092985 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-170 |
| Cow position: | chr27:26643662-26643515 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 16-231 |
| Cow position: | chr27:15409058-15409258 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 16-231 |
| Cow position: | chr27:22220532-22220317 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-231 |
| Cow position: | chr27:237246-237019 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 85 |
| Conread position: | 17-231 |
| Cow position: | chr27:16103784-16103578 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 17-231 |
| Cow position: | chr27:22171274-22171069 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 17-253 |
| Cow position: | chr27:788820-789065 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 18-231 |
| Cow position: | chr27:7425212-7425421 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 18-231 |
| Cow position: | chr27:23957492-23957285 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 18-231 |
| Cow position: | chr27:26865142-26865341 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 18-231 |
| Cow position: | chr27:27389045-27389260 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 18-251 |
| Cow position: | chr27:6106676-6106457 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 18-258 |
| Cow position: | chr27:13204435-13204203 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 228, 59 |
| Conread position: | 19-266 |
| Cow position: | chr27:22035402-22035642 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 227, 127 |
| Conread position: | 21-228 |
| Cow position: | chr27:30455967-30455763 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 24-197 |
| Cow position: | chr27:26506712-26506544 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 24-254 |
| Cow position: | chr27:11323300-11323072 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 26-260 |
| Cow position: | chr27:26481227-26481462 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 170, 69 |
| Conread position: | 29-141 |
| Cow position: | chr27:11466500-11466612 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-256 |
| Cow position: | chr27:3518470-3518248 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 131, 96 |
| Conread position: | 29-260 |
| Cow position: | chr27:20486023-20485782 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 29-261 |
| Cow position: | chr27:19452967-19452739 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 137, 114 |
| Conread position: | 30-230 |
| Cow position: | chr27:26323412-26323210 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 130, 16 |
| Conread position: | 31-231 |
| Cow position: | chr27:19717878-19717665 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 31-257 |
| Cow position: | chr27:24223915-24223698 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 32-225 |
| Cow position: | chr27:26400759-26400944 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 32-231 |
| Cow position: | chr27:17102858-17102667 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 34-232 |
| Cow position: | chr27:19576363-19576557 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 189, 111 |
| Conread position: | 34-258 |
| Cow position: | chr27:29615002-29614786 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 40-229 |
| Cow position: | chr27:15859343-15859528 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 40-255 |
| Cow position: | chr27:11134040-11133831 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 41-230 |
| Cow position: | chr27:10581482-10581302 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 41-231 |
| Cow position: | chr27:11208602-11208790 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 22 |
| Conread position: | 43-225 |
| Cow position: | chr27:26504253-26504077 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 43-231 |
| Cow position: | chr27:1184226-1184406 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 44-231 |
| Cow position: | chr27:178815-178630 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 44-231 |
| Cow position: | chr27:2949377-2949549 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 46-231 |
| Cow position: | chr27:8629923-8630106 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 47-261 |
| Cow position: | chr27:4398544-4398747 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 52-231 |
| Cow position: | chr27:21951036-21951213 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 58-298 |
| Cow position: | chr27:18752792-18752547 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 49 |
| Conread position: | 59-229 |
| Cow position: | chr27:23177376-23177543 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 60-231 |
| Cow position: | chr27:26940013-26939845 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 60-260 |
| Cow position: | chr27:18791575-18791778 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 61-254 |
| Cow position: | chr27:24240292-24240096 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 61-258 |
| Cow position: | chr27:27449952-27450142 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 62-249 |
| Cow position: | chr27:27606364-27606545 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 63-235 |
| Cow position: | chr27:23477877-23477711 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 65-225 |
| Cow position: | chr27:31153628-31153782 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 66-226 |
| Cow position: | chr27:31183504-31183343 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 79 |
| Conread position: | 67-238 |
| Cow position: | chr27:29183289-29183466 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 68-230 |
| Cow position: | chr27:22748254-22748096 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 68-231 |
| Cow position: | chr27:26087242-26087087 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 68-238 |
| Cow position: | chr27:9253187-9253352 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 69-231 |
| Cow position: | chr27:11528856-11528696 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 77 |
| Conread position: | 69-231 |
| Cow position: | chr27:20490456-20490291 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 76 |
| Conread position: | 77-275 |
| Cow position: | chr27:25000043-25000241 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 159 |
| Conread position: | 82-230 |
| Cow position: | chr27:28062286-28062426 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 89-251 |
| Cow position: | chr27:22150789-22150946 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.