Cow genome map

Conread name: Emb1-C0005186_P05

Conread position: 1-107
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 18

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-230
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 145, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 1-236
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 158, 0

Conread position: 1-238
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 144, 0

Conread position: 1-252
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 127

Conread position: 1-254
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 36

Conread position: 1-254
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 57

Conread position: 1-255
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 238, 142

Conread position: 1-255
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 5, 104

Conread position: 1-266
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 14, 74

Conread position: 1-266
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 245, 146

Conread position: 2-255
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 146

Conread position: 2-260
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 107

Conread position: 3-145
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 3-231
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 94

Conread position: 3-247
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 145

Conread position: 4-142
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 4-144
Cow position:
Alignm length: 141
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-230
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 4-230
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 8

Conread position: 4-264
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 243, 45

Conread position: 5-145
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 5-230
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 5-267
Cow position:
Alignm length: 266
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 142

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 6-253
Cow position:
Alignm length: 250
Alignm identity: 171
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 39

Conread position: 6-258
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 6-261
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 231, 37

Conread position: 7-229
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 7-229
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 140, 0

Conread position: 7-230
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 7-250
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 170, 0

Conread position: 8-142
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-176
Cow position:
Alignm length: 169
Alignm identity: 138
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 8-231
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 33

Conread position: 8-231
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 8-231
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 119

Conread position: 8-232
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 77

Conread position: 8-232
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 78

Conread position: 8-238
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 9-238
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 148, 67

Conread position: 10-145
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 10-231
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 155, 66

Conread position: 11-145
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 103

Conread position: 11-231
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 149, 115

Conread position: 11-231
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 136, 41

Conread position: 11-260
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 66

Conread position: 11-260
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 145, 261

Conread position: 12-238
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 13-229
Cow position:
Alignm length: 218
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 113

Conread position: 13-231
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 147, 6

Conread position: 14-145
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 14-157
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 14-187
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 14-224
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 14-225
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 148, 132

Conread position: 14-225
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 14-225
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 126, 0

Conread position: 14-225
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 14-225
Cow position:
Alignm length: 213
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 202, 47

Conread position: 14-229
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 14-230
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 14-230
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 127, 0

Conread position: 14-230
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 104

Conread position: 14-230
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 14-230
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 127, 0

Conread position: 14-231
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 38

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 14-231
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 14-232
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 95, 104

Conread position: 14-232
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 146, 112

Conread position: 14-249
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 64

Conread position: 14-250
Cow position:
Alignm length: 237
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 14-253
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 146, 48

Conread position: 14-255
Cow position:
Alignm length: 243
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 63

Conread position: 14-260
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 14-260
Cow position:
Alignm length: 249
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 25

Conread position: 14-260
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 14-260
Cow position:
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 104

Conread position: 15-224
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 129, 0

Conread position: 15-236
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 138, 220

Conread position: 15-253
Cow position:
Alignm length: 246
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 152, 0

Conread position: 15-255
Cow position:
Alignm length: 241
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 15-255
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 117

Conread position: 16-145
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 16-228
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 88, 150

Conread position: 16-309
Cow position:
Alignm length: 309
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 92

Conread position: 17-145
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 17-175
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 134, 0

Conread position: 17-255
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 20

Conread position: 17-260
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 213, 129

Conread position: 18-229
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 142, 58

Conread position: 18-238
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 8, 127

Conread position: 20-145
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 20-229
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 0

Conread position: 20-231
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 114

Conread position: 20-255
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 157, 126

Conread position: 21-231
Cow position:
Alignm length: 212
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 78

Conread position: 21-260
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 24, 16

Conread position: 26-231
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 121

Conread position: 29-230
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 29-231
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 30-255
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 212, 36

Conread position: 32-230
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 37-230
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 44

Conread position: 37-231
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 37-238
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 123, 136

Conread position: 41-229
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 42-231
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 164

Conread position: 43-253
Cow position:
Alignm length: 211
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 44-228
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 56

Conread position: 46-250
Cow position:
Alignm length: 205
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 46-254
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 64

Conread position: 46-254
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 10, 23

Conread position: 46-260
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 52-232
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 53-231
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 53-260
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 57-231
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 58-260
Cow position:
Alignm length: 203
Alignm identity: 138
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 60-231
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 54

Conread position: 60-232
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 138, 16

Conread position: 61-231
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 63-250
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 63-264
Cow position:
Alignm length: 202
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 63-284
Cow position:
Alignm length: 227
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 164

Conread position: 64-231
Cow position:
Alignm length: 168
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 71-258
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 157, 42

Conread position: 72-231
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 76-231
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 70

Conread position: 84-231
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 84-231
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 86-260
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 104-229
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 42

Show alignments to all cow chromosomes.