Cow genome map
| Conread name: | Emb1-C0005186_P05 |
| Conread position: | 1-107 |
| Cow position: | chr29:31477153-31477046 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 1-170 |
| Cow position: | chr29:23243916-23243749 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-230 |
| Cow position: | chr29:25737453-25737232 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 1-231 |
| Cow position: | chr29:26275571-26275789 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-231 |
| Cow position: | chr29:44139281-44139057 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-236 |
| Cow position: | chr29:30548737-30548966 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 1-238 |
| Cow position: | chr29:5063106-5063338 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 1-252 |
| Cow position: | chr29:16290685-16290931 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 127 |
| Conread position: | 1-254 |
| Cow position: | chr29:26017543-26017291 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 1-254 |
| Cow position: | chr29:29057139-29057381 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 1-255 |
| Cow position: | chr29:22167117-22166874 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 238, 142 |
| Conread position: | 1-255 |
| Cow position: | chr29:39111351-39111114 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 5, 104 |
| Conread position: | 1-266 |
| Cow position: | chr29:20770307-20770567 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 1-266 |
| Cow position: | chr29:22162288-22162038 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 245, 146 |
| Conread position: | 2-255 |
| Cow position: | chr29:34773776-34773538 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 146 |
| Conread position: | 2-260 |
| Cow position: | chr29:16657656-16657908 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 3-145 |
| Cow position: | chr29:5186533-5186388 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 3-231 |
| Cow position: | chr29:31928950-31929174 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 3-247 |
| Cow position: | chr29:34359017-34358772 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 4-142 |
| Cow position: | chr29:18012519-18012660 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 4-144 |
| Cow position: | chr29:31200222-31200362 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-230 |
| Cow position: | chr29:1614894-1615114 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 4-230 |
| Cow position: | chr29:9310565-9310790 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 143, 8 |
| Conread position: | 4-264 |
| Cow position: | chr29:4070592-4070843 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 243, 45 |
| Conread position: | 5-145 |
| Cow position: | chr29:742684-742544 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-230 |
| Cow position: | chr29:396378-396589 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 5-267 |
| Cow position: | chr29:9709659-9709919 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 142 |
| Conread position: | 6-231 |
| Cow position: | chr29:28066459-28066668 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 6-231 |
| Cow position: | chr29:36530833-36531054 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 6-253 |
| Cow position: | chr29:25092078-25092314 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 6-258 |
| Cow position: | chr29:41112913-41112678 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 6-261 |
| Cow position: | chr29:1007788-1008037 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 231, 37 |
| Conread position: | 7-229 |
| Cow position: | chr29:7624146-7624351 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 7-229 |
| Cow position: | chr29:32197664-32197880 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 7-230 |
| Cow position: | chr29:29923605-29923389 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 7-250 |
| Cow position: | chr29:21666054-21666293 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 8-142 |
| Cow position: | chr29:24578831-24578965 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-176 |
| Cow position: | chr29:38978500-38978664 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 8-231 |
| Cow position: | chr29:5520518-5520296 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 8-231 |
| Cow position: | chr29:19762239-19762451 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 8-231 |
| Cow position: | chr29:21443371-21443153 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 119 |
| Conread position: | 8-232 |
| Cow position: | chr29:29769383-29769165 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 8-232 |
| Cow position: | chr29:36210112-36210339 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 8-238 |
| Cow position: | chr29:10058567-10058348 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 9-238 |
| Cow position: | chr29:22735136-22734911 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 148, 67 |
| Conread position: | 10-145 |
| Cow position: | chr29:32211096-32210966 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 10-231 |
| Cow position: | chr29:1011610-1011405 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 155, 66 |
| Conread position: | 11-145 |
| Cow position: | chr29:4874912-4874775 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 11-231 |
| Cow position: | chr29:15947138-15947357 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 149, 115 |
| Conread position: | 11-231 |
| Cow position: | chr29:23155199-23155423 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 136, 41 |
| Conread position: | 11-260 |
| Cow position: | chr29:19949280-19949522 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 11-260 |
| Cow position: | chr29:28840127-28840390 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 145, 261 |
| Conread position: | 12-238 |
| Cow position: | chr29:40791282-40791492 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 13-229 |
| Cow position: | chr29:35677570-35677355 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 113 |
| Conread position: | 13-231 |
| Cow position: | chr29:30681736-30681515 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 147, 6 |
| Conread position: | 14-145 |
| Cow position: | chr29:17154753-17154883 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 14-157 |
| Cow position: | chr29:26615746-26615600 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 14-187 |
| Cow position: | chr29:1556906-1557073 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 14-224 |
| Cow position: | chr29:43099771-43099568 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 14-225 |
| Cow position: | chr29:5892819-5893028 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 148, 132 |
| Conread position: | 14-225 |
| Cow position: | chr29:17109934-17110135 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 14-225 |
| Cow position: | chr29:35501680-35501483 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 14-225 |
| Cow position: | chr29:43544628-43544423 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 14-225 |
| Cow position: | chr29:44991449-44991243 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 202, 47 |
| Conread position: | 14-229 |
| Cow position: | chr29:2744293-2744083 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 14-230 |
| Cow position: | chr29:732595-732797 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-230 |
| Cow position: | chr29:12680130-12680345 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 14-230 |
| Cow position: | chr29:17222387-17222603 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 104 |
| Conread position: | 14-230 |
| Cow position: | chr29:17804509-17804717 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 14-230 |
| Cow position: | chr29:26540566-26540353 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 14-231 |
| Cow position: | chr29:4480196-4479979 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 146, 38 |
| Conread position: | 14-231 |
| Cow position: | chr29:5409167-5408954 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 14-231 |
| Cow position: | chr29:20527189-20526974 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 14-231 |
| Cow position: | chr29:30827380-30827596 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 14-231 |
| Cow position: | chr29:36357103-36357316 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 14-232 |
| Cow position: | chr29:5046627-5046842 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 95, 104 |
| Conread position: | 14-232 |
| Cow position: | chr29:17297110-17297327 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 146, 112 |
| Conread position: | 14-249 |
| Cow position: | chr29:26778857-26779080 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 14-250 |
| Cow position: | chr29:36249011-36249244 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 14-253 |
| Cow position: | chr29:13028418-13028660 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 146, 48 |
| Conread position: | 14-255 |
| Cow position: | chr29:28420729-28420969 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 14-260 |
| Cow position: | chr29:22613404-22613635 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 14-260 |
| Cow position: | chr29:23874434-23874678 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 14-260 |
| Cow position: | chr29:31981805-31982035 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 14-260 |
| Cow position: | chr29:42630095-42630333 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 104 |
| Conread position: | 15-224 |
| Cow position: | chr29:22723576-22723777 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 15-236 |
| Cow position: | chr29:8926486-8926254 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 138, 220 |
| Conread position: | 15-253 |
| Cow position: | chr29:25474898-25475143 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 15-255 |
| Cow position: | chr29:41530825-41531062 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 15-255 |
| Cow position: | chr29:42364041-42363808 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 117 |
| Conread position: | 16-145 |
| Cow position: | chr29:36217091-36217217 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 16-228 |
| Cow position: | chr29:31943842-31944053 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 88, 150 |
| Conread position: | 16-309 |
| Cow position: | chr29:23220523-23220220 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 17-145 |
| Cow position: | chr29:4002868-4002997 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 17-175 |
| Cow position: | chr29:18085549-18085704 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 17-255 |
| Cow position: | chr29:22032664-22032430 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 20 |
| Conread position: | 17-260 |
| Cow position: | chr29:7290753-7290985 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 213, 129 |
| Conread position: | 18-229 |
| Cow position: | chr29:29324442-29324234 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 142, 58 |
| Conread position: | 18-238 |
| Cow position: | chr29:9378614-9378830 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 8, 127 |
| Conread position: | 20-145 |
| Cow position: | chr29:11527809-11527687 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 20-229 |
| Cow position: | chr29:23825230-23825026 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 20-231 |
| Cow position: | chr29:38980094-38979892 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 114 |
| Conread position: | 20-255 |
| Cow position: | chr29:39038289-39038059 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 157, 126 |
| Conread position: | 21-231 |
| Cow position: | chr29:24952669-24952875 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 122, 78 |
| Conread position: | 21-260 |
| Cow position: | chr29:38754958-38754723 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 26-231 |
| Cow position: | chr29:29308586-29308394 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 29-230 |
| Cow position: | chr29:36781315-36781123 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 29-231 |
| Cow position: | chr29:19363700-19363896 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 30-255 |
| Cow position: | chr29:22729558-22729778 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 212, 36 |
| Conread position: | 32-230 |
| Cow position: | chr29:19125314-19125517 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 37-230 |
| Cow position: | chr29:15796483-15796671 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 44 |
| Conread position: | 37-231 |
| Cow position: | chr29:43088308-43088494 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 37-238 |
| Cow position: | chr29:15797949-15798146 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 136 |
| Conread position: | 41-229 |
| Cow position: | chr29:22028951-22028775 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 42-231 |
| Cow position: | chr29:36697759-36697945 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 107, 164 |
| Conread position: | 43-253 |
| Cow position: | chr29:14576862-14577067 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 44-228 |
| Cow position: | chr29:25288919-25288734 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 116, 56 |
| Conread position: | 46-250 |
| Cow position: | chr29:18878475-18878275 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 46-254 |
| Cow position: | chr29:17436757-17436958 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 46-254 |
| Cow position: | chr29:32215713-32215913 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 46-260 |
| Cow position: | chr29:8634660-8634868 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 52-232 |
| Cow position: | chr29:40351063-40350892 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 53-231 |
| Cow position: | chr29:7444048-7443879 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 53-260 |
| Cow position: | chr29:936220-936419 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 57-231 |
| Cow position: | chr29:26631058-26631237 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 58-260 |
| Cow position: | chr29:11894716-11894915 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 60-231 |
| Cow position: | chr29:40763674-40763508 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 60-232 |
| Cow position: | chr29:34274356-34274185 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 138, 16 |
| Conread position: | 61-231 |
| Cow position: | chr29:17282089-17282249 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 63-250 |
| Cow position: | chr29:34359798-34359619 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 63-264 |
| Cow position: | chr29:4441181-4440985 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 63-284 |
| Cow position: | chr29:8798992-8798768 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 164 |
| Conread position: | 64-231 |
| Cow position: | chr29:30440961-30441127 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 71-258 |
| Cow position: | chr29:41223196-41223385 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 157, 42 |
| Conread position: | 72-231 |
| Cow position: | chr29:33143322-33143168 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 76-231 |
| Cow position: | chr29:43311512-43311354 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 70 |
| Conread position: | 84-231 |
| Cow position: | chr29:22776123-22776264 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 84-231 |
| Cow position: | chr29:40112426-40112567 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 86-260 |
| Cow position: | chr29:36546736-36546567 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 104-229 |
| Cow position: | chr29:27846545-27846670 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 42 |
Show alignments to all cow chromosomes.