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Cow genome map

           
Conread name:
           
Emb1-C0005188_E08
        

               
Conread position:
               
4-173
               

               
Cow position:
               
chr13:30238276-30238446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr13:20542009-20541826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr13:34937521-34937700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr13:15924354-15924172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr13:35757271-35757453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr13:43983049-43982872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
13-173
               

               
Cow position:
               
chr13:6668080-6667919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
13-182
               

               
Cow position:
               
chr13:22766063-22766236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
21-182
               

               
Cow position:
               
chr13:11064121-11063963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 107
               

               
Conread position:
               
23-184
               

               
Cow position:
               
chr13:32737775-32737614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
10, 108
               

               
Conread position:
               
24-182
               

               
Cow position:
               
chr13:27922179-27922016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
24-183
               

               
Cow position:
               
chr13:3654272-3654109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
33-157
               

               
Cow position:
               
chr13:60700787-60700662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
34-160
               

               
Cow position:
               
chr13:34766812-34766685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
94-433
               

               
Cow position:
               
chr13:562779-563140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
124-416
               

               
Cow position:
               
chr13:26261470-26261778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
139-435
               

               
Cow position:
               
chr13:60967065-60966768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
151, 11
               

               
Conread position:
               
139-446
               

               
Cow position:
               
chr13:35660060-35659748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
139-461
               

               
Cow position:
               
chr13:13089331-13089007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr13:20820532-20820776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
142-377
               

               
Cow position:
               
chr13:26382926-26383172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
142-409
               

               
Cow position:
               
chr13:6945678-6945395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
142-420
               

               
Cow position:
               
chr13:32717566-32717857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
142-421
               

               
Cow position:
               
chr13:60508818-60509102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
142-431
               

               
Cow position:
               
chr13:20649677-20649977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
162-409
               

               
Cow position:
               
chr13:46525163-46525408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
120, 8
               

               
Conread position:
               
162-440
               

               
Cow position:
               
chr13:20863739-20864018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
163-342
               

               
Cow position:
               
chr13:14576946-14576773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
163-423
               

               
Cow position:
               
chr13:54095092-54094825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
164-349
               

               
Cow position:
               
chr13:60221146-60221341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
165-410
               

               
Cow position:
               
chr13:27524982-27525238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
165-431
               

               
Cow position:
               
chr13:9125953-9125673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
166-433
               

               
Cow position:
               
chr13:11954830-11955110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr13:10859685-10859877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
173-348
               

               
Cow position:
               
chr13:25453441-25453263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
173-357
               

               
Cow position:
               
chr13:32167031-32167217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
173-358
               

               
Cow position:
               
chr13:265416-265227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
173-358
               

               
Cow position:
               
chr13:20834586-20834770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr13:21524696-21524510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr13:41360022-41359835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
173-363
               

               
Cow position:
               
chr13:51856366-51856558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr13:61976694-61976897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
173-386
               

               
Cow position:
               
chr13:12408013-12408229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
173-386
               

               
Cow position:
               
chr13:14927508-14927288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
173-386
               

               
Cow position:
               
chr13:18215700-18215489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
173-386
               

               
Cow position:
               
chr13:50690121-50690338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
173-405
               

               
Cow position:
               
chr13:34508147-34507908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-405
               

               
Cow position:
               
chr13:58043899-58043663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
173-408
               

               
Cow position:
               
chr13:8202614-8202848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
173-409
               

               
Cow position:
               
chr13:30651446-30651205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-412
               

               
Cow position:
               
chr13:24754155-24753907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
173-416
               

               
Cow position:
               
chr13:1011603-1011354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
173-416
               

               
Cow position:
               
chr13:33256767-33256522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr13:33875933-33875683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr13:20440330-20440567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
200, 21
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr13:47215982-47216246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr13:1042685-1042953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr13:36948899-36949162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr13:37382082-37381813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
173-428
               

               
Cow position:
               
chr13:60690448-60690718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
173-429
               

               
Cow position:
               
chr13:5091390-5091658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-429
               

               
Cow position:
               
chr13:12875714-12875963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
194, 26
               

               
Conread position:
               
173-429
               

               
Cow position:
               
chr13:37516863-37517130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
173-431
               

               
Cow position:
               
chr13:17613617-17613350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr13:6153508-6153778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr13:25531519-25531782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr13:6974436-6974164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr13:12448717-12448991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr13:19262080-19261833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr13:34052331-34052586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr13:60429808-60430072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
173-434
               

               
Cow position:
               
chr13:6835538-6835792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
173-435
               

               
Cow position:
               
chr13:311703-311434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
173-438
               

               
Cow position:
               
chr13:47007468-47007725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
195, 12
               

               
Conread position:
               
173-440
               

               
Cow position:
               
chr13:31814138-31813874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
173-446
               

               
Cow position:
               
chr13:8824537-8824261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
173-446
               

               
Cow position:
               
chr13:30798993-30798711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr13:15958892-15958606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr13:20175010-20174735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
169, 26
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr13:23269942-23270223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
173-452
               

               
Cow position:
               
chr13:13266072-13265797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
173-457
               

               
Cow position:
               
chr13:34281951-34281661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
173-457
               

               
Cow position:
               
chr13:57493913-57494204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
173-458
               

               
Cow position:
               
chr13:6616477-6616769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr13:20605848-20606135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr13:56686702-56686413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
173-468
               

               
Cow position:
               
chr13:8362475-8362775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr13:30794091-30793791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 9
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr13:45726150-45725869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
196, 21
               

               
Conread position:
               
175-437
               

               
Cow position:
               
chr13:54345049-54344766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
176-341
               

               
Cow position:
               
chr13:46329196-46329363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
176-361
               

               
Cow position:
               
chr13:15591865-15592047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
176-377
               

               
Cow position:
               
chr13:9142550-9142358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
176-394
               

               
Cow position:
               
chr13:20683855-20684069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
176-406
               

               
Cow position:
               
chr13:20683214-20682975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
176-432
               

               
Cow position:
               
chr13:5752155-5752420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
176-446
               

               
Cow position:
               
chr13:8609283-8609558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
176-461
               

               
Cow position:
               
chr13:37484002-37484297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
176-461
               

               
Cow position:
               
chr13:38329901-38329598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
176-464
               

               
Cow position:
               
chr13:42114289-42113992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
177-377
               

               
Cow position:
               
chr13:49283075-49283276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr13:45604145-45604383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
104, 94
               

               
Conread position:
               
177-413
               

               
Cow position:
               
chr13:33352092-33352325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
177-433
               

               
Cow position:
               
chr13:43762440-43762175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 122
               

               
Conread position:
               
177-450
               

               
Cow position:
               
chr13:21276122-21275845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
177-459
               

               
Cow position:
               
chr13:45353309-45353021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
178-461
               

               
Cow position:
               
chr13:47313169-47312899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
195, 20
               

               
Conread position:
               
179-432
               

               
Cow position:
               
chr13:37981490-37981741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
182-435
               

               
Cow position:
               
chr13:34728575-34728839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
182-467
               

               
Cow position:
               
chr13:12977824-12977541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
187-416
               

               
Cow position:
               
chr13:8201223-8201462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
190-349
               

               
Cow position:
               
chr13:52379497-52379665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
190-446
               

               
Cow position:
               
chr13:19364503-19364234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
192-342
               

               
Cow position:
               
chr13:53012127-53012283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr13:16243483-16243311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr13:43629522-43629685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
192-420
               

               
Cow position:
               
chr13:33631378-33631144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
192-423
               

               
Cow position:
               
chr13:21904916-21904678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
192-425
               

               
Cow position:
               
chr13:9570239-9570017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr13:4664603-4664862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr13:22775054-22775295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr13:22780203-22779964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr13:52879668-52879415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
192-434
               

               
Cow position:
               
chr13:24280506-24280250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr13:25261549-25261815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
193-450
               

               
Cow position:
               
chr13:55673948-55674222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 78
               

               
Conread position:
               
194-379
               

               
Cow position:
               
chr13:29671185-29671375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
198-452
               

               
Cow position:
               
chr13:13306358-13306083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 236
               

               
Conread position:
               
198-468
               

               
Cow position:
               
chr13:54418484-54418190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr13:32949752-32949975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 72
               

               
Conread position:
               
199-427
               

               
Cow position:
               
chr13:46736455-46736222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
199-461
               

               
Cow position:
               
chr13:12682290-12682564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 75
               

               
Conread position:
               
200-344
               

               
Cow position:
               
chr13:35853100-35853252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
200-433
               

               
Cow position:
               
chr13:2414275-2414032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
200-443
               

               
Cow position:
               
chr13:15172157-15172414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
200-450
               

               
Cow position:
               
chr13:20879585-20879838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
200-450
               

               
Cow position:
               
chr13:45022958-45023226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
200-450
               

               
Cow position:
               
chr13:49848167-49847908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
202-425
               

               
Cow position:
               
chr13:17622532-17622296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
204-415
               

               
Cow position:
               
chr13:21241846-21242062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
204-425
               

               
Cow position:
               
chr13:16024834-16024602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
204-461
               

               
Cow position:
               
chr13:20880680-20880948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
204-468
               

               
Cow position:
               
chr13:5278942-5279218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
205-357
               

               
Cow position:
               
chr13:46516310-46516159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
205-377
               

               
Cow position:
               
chr13:27027524-27027707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
205-414
               

               
Cow position:
               
chr13:6079174-6079396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
205-414
               

               
Cow position:
               
chr13:61166212-61166428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
205-415
               

               
Cow position:
               
chr13:13501377-13501600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
205-424
               

               
Cow position:
               
chr13:11096413-11096186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
205-430
               

               
Cow position:
               
chr13:7663184-7663415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
205-430
               

               
Cow position:
               
chr13:18244101-18243868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
205-430
               

               
Cow position:
               
chr13:42860325-42860565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
205-449
               

               
Cow position:
               
chr13:6759545-6759803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
205-451
               

               
Cow position:
               
chr13:17970790-17971039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
206-336
               

               
Cow position:
               
chr13:22732134-22732269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-348
               

               
Cow position:
               
chr13:36264208-36264060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-353
               

               
Cow position:
               
chr13:21988858-21989014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
206-357
               

               
Cow position:
               
chr13:26983861-26983706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr13:1636245-1636075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 141
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr13:27017145-27017315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
206-383
               

               
Cow position:
               
chr13:53566840-53566657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-385
               

               
Cow position:
               
chr13:11460867-11460679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr13:15740310-15740123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr13:23960562-23960753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 152
               

               
Conread position:
               
206-403
               

               
Cow position:
               
chr13:14544366-14544151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 149
               

               
Conread position:
               
206-408
               

               
Cow position:
               
chr13:17994170-17993958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
206-409
               

               
Cow position:
               
chr13:24539739-24539519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
206-413
               

               
Cow position:
               
chr13:26098386-26098182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr13:8838750-8838971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr13:61170472-61170704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-423
               

               
Cow position:
               
chr13:2774365-2774142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
206-423
               

               
Cow position:
               
chr13:15162425-15162638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
206-425
               

               
Cow position:
               
chr13:12574878-12574648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-428
               

               
Cow position:
               
chr13:44202233-44202008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr13:1155464-1155695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr13:4553043-4552809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr13:8524377-8524609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr13:11808786-11808569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr13:60974319-60974088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr13:4038124-4037896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr13:46182027-46181795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr13:51940973-51940741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
206-435
               

               
Cow position:
               
chr13:21235441-21235682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-446
               

               
Cow position:
               
chr13:12546663-12546919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
206-446
               

               
Cow position:
               
chr13:18989949-18989709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-446
               

               
Cow position:
               
chr13:21194274-21194519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 39
               

               
Conread position:
               
206-446
               

               
Cow position:
               
chr13:52894386-52894137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
206-450
               

               
Cow position:
               
chr13:19178520-19178258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
206-450
               

               
Cow position:
               
chr13:32283371-32283113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr13:20784832-20784572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-464
               

               
Cow position:
               
chr13:5713538-5713276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
206-464
               

               
Cow position:
               
chr13:12670201-12670472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 148
               

               
Conread position:
               
206-464
               

               
Cow position:
               
chr13:13261252-13260979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr13:25927036-25926764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr13:33517680-33517951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr13:37069593-37069319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
207-349
               

               
Cow position:
               
chr13:37497515-37497656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
207-377
               

               
Cow position:
               
chr13:20705960-20706138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
207-423
               

               
Cow position:
               
chr13:15349027-15349241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
207-425
               

               
Cow position:
               
chr13:23166854-23167086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
207-431
               

               
Cow position:
               
chr13:41154803-41155025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
161, 64
               

               
Conread position:
               
207-433
               

               
Cow position:
               
chr13:55843727-55843483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
207-459
               

               
Cow position:
               
chr13:17291888-17292152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
207-461
               

               
Cow position:
               
chr13:12990088-12989832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
207-461
               

               
Cow position:
               
chr13:17800315-17800053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
208-367
               

               
Cow position:
               
chr13:56148781-56148615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
208-367
               

               
Cow position:
               
chr13:56160186-56160352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
208-377
               

               
Cow position:
               
chr13:47756617-47756437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
208-406
               

               
Cow position:
               
chr13:46298396-46298612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
208-429
               

               
Cow position:
               
chr13:22886750-22886987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
208-431
               

               
Cow position:
               
chr13:7076498-7076264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-433
               

               
Cow position:
               
chr13:15974852-15974615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
208-450
               

               
Cow position:
               
chr13:38012603-38012346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-461
               

               
Cow position:
               
chr13:17114138-17114397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
208-468
               

               
Cow position:
               
chr13:11260494-11260241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr13:21210103-21209887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
209-425
               

               
Cow position:
               
chr13:34261473-34261242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
209-432
               

               
Cow position:
               
chr13:2462991-2463228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 6
               

               
Conread position:
               
209-433
               

               
Cow position:
               
chr13:1780075-1779832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr13:2884294-2884039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
209-469
               

               
Cow position:
               
chr13:10924665-10924947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
210-450
               

               
Cow position:
               
chr13:13176889-13176636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
210-461
               

               
Cow position:
               
chr13:44323143-44322876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
210-469
               

               
Cow position:
               
chr13:20041717-20041996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
212-431
               

               
Cow position:
               
chr13:29122604-29122813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
174, 59
               

               
Conread position:
               
212-447
               

               
Cow position:
               
chr13:15869357-15869111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
212-452
               

               
Cow position:
               
chr13:24586285-24586033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 145
               

               
Conread position:
               
213-432
               

               
Cow position:
               
chr13:43184635-43184867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
213-461
               

               
Cow position:
               
chr13:37818522-37818772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
214-386
               

               
Cow position:
               
chr13:23667498-23667315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
214-431
               

               
Cow position:
               
chr13:19393523-19393300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
214-461
               

               
Cow position:
               
chr13:17816007-17815760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
216-408
               

               
Cow position:
               
chr13:20536733-20536531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
216-447
               

               
Cow position:
               
chr13:24369819-24369569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
216-469
               

               
Cow position:
               
chr13:30026347-30026083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
217-433
               

               
Cow position:
               
chr13:47963968-47964190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
218-394
               

               
Cow position:
               
chr13:11061218-11061037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
218-412
               

               
Cow position:
               
chr13:37947780-37947970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
125, 5
               

               
Conread position:
               
218-433
               

               
Cow position:
               
chr13:54093972-54093748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
218-450
               

               
Cow position:
               
chr13:37945985-37946220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
65, 5
               

               
Conread position:
               
221-420
               

               
Cow position:
               
chr13:12207272-12207061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
221-425
               

               
Cow position:
               
chr13:12045106-12045324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
221-440
               

               
Cow position:
               
chr13:17762844-17763053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
222-425
               

               
Cow position:
               
chr13:11767813-11768032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
223-452
               

               
Cow position:
               
chr13:55315962-55316200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
225-377
               

               
Cow position:
               
chr13:33054170-33054328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
225-425
               

               
Cow position:
               
chr13:20530918-20531135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
225-433
               

               
Cow position:
               
chr13:15192669-15192885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
226-411
               

               
Cow position:
               
chr13:20839792-20839589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
226-433
               

               
Cow position:
               
chr13:43812307-43812089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
226-433
               

               
Cow position:
               
chr13:43839322-43839540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
226-457
               

               
Cow position:
               
chr13:4464231-4463994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
227-424
               

               
Cow position:
               
chr13:15281715-15281927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
227-431
               

               
Cow position:
               
chr13:21039375-21039594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
227-468
               

               
Cow position:
               
chr13:6975567-6975820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
228-428
               

               
Cow position:
               
chr13:10845815-10845604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
229-349
               

               
Cow position:
               
chr13:59962-60088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
229-409
               

               
Cow position:
               
chr13:5263065-5263257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
229-429
               

               
Cow position:
               
chr13:37795655-37795452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
229-430
               

               
Cow position:
               
chr13:51821671-51821873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
229-433
               

               
Cow position:
               
chr13:13465569-13465776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
229-465
               

               
Cow position:
               
chr13:17745460-17745221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
230-446
               

               
Cow position:
               
chr13:26150771-26150980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
137, 41
               

               
Conread position:
               
230-469
               

               
Cow position:
               
chr13:18491814-18491570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
235-457
               

               
Cow position:
               
chr13:57475204-57475432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
235-469
               

               
Cow position:
               
chr13:37521517-37521770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
236-377
               

               
Cow position:
               
chr13:11147520-11147370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr13:51014966-51015155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
236-461
               

               
Cow position:
               
chr13:15257164-15257387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
241-377
               

               
Cow position:
               
chr13:16833869-16834007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
244-430
               

               
Cow position:
               
chr13:9643676-9643880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
246-384
               

               
Cow position:
               
chr13:19223853-19223706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
246-423
               

               
Cow position:
               
chr13:37592734-37592930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
246-431
               

               
Cow position:
               
chr13:9593711-9593514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
250-423
               

               
Cow position:
               
chr13:24230413-24230223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
250-464
               

               
Cow position:
               
chr13:52749288-52749501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
253-469
               

               
Cow position:
               
chr13:8652240-8652468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
258-425
               

               
Cow position:
               
chr13:5079033-5079210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
259-431
               

               
Cow position:
               
chr13:21283515-21283695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
259-432
               

               
Cow position:
               
chr13:15991031-15991225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
279-428
               

               
Cow position:
               
chr13:62474633-62474788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
279-451
               

               
Cow position:
               
chr13:7790180-7789999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
279-461
               

               
Cow position:
               
chr13:14771627-14771434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 150
               

               
Conread position:
               
279-461
               

               
Cow position:
               
chr13:49022704-49022886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
279-469
               

               
Cow position:
               
chr13:4420513-4420316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 155
               

               
Conread position:
               
280-457
               

               
Cow position:
               
chr13:15110489-15110301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 151
               

               
Conread position:
               
280-457
               

               
Cow position:
               
chr13:15903182-15903010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
284-415
               

               
Cow position:
               
chr13:966233-966099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 5
               

               
Conread position:
               
287-432
               

               
Cow position:
               
chr13:9800661-9800516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
302-447
               

               
Cow position:
               
chr13:20360413-20360267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 44
               
Show alignments to all cow chromosomes.