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Cow genome map

           
Conread name:
           
Emb1-C0005188_E08
        

               
Conread position:
               
2-182
               

               
Cow position:
               
chr14:44287346-44287164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr14:17760990-17760813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr14:45303042-45302871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
8-175
               

               
Cow position:
               
chr14:44226304-44226473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
13-182
               

               
Cow position:
               
chr14:45080961-45081130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
20-129
               

               
Cow position:
               
chr14:13273169-13273280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
20-182
               

               
Cow position:
               
chr14:13621220-13621058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 134
               

               
Conread position:
               
20-184
               

               
Cow position:
               
chr14:19620142-19620308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
20-185
               

               
Cow position:
               
chr14:44685966-44686132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
24-175
               

               
Cow position:
               
chr14:46465004-46465155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
31-178
               

               
Cow position:
               
chr14:48970614-48970760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
49-208
               

               
Cow position:
               
chr14:35366485-35366329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
92-337
               

               
Cow position:
               
chr14:34395252-34395502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
142-377
               

               
Cow position:
               
chr14:26116426-26116185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
142-433
               

               
Cow position:
               
chr14:22381191-22381493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
142-446
               

               
Cow position:
               
chr14:1802760-1803067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
146-416
               

               
Cow position:
               
chr14:30662346-30662064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
155-420
               

               
Cow position:
               
chr14:45605440-45605165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
5, 48
               

               
Conread position:
               
159-400
               

               
Cow position:
               
chr14:37108567-37108811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
163-431
               

               
Cow position:
               
chr14:38355529-38355249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
165-416
               

               
Cow position:
               
chr14:46965898-46965637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
165-433
               

               
Cow position:
               
chr14:33247088-33247369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
167-420
               

               
Cow position:
               
chr14:19222214-19221955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
172-375
               

               
Cow position:
               
chr14:20666695-20666897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
172-425
               

               
Cow position:
               
chr14:25385554-25385817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr14:4369721-4369903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr14:38549130-38548958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
173-351
               

               
Cow position:
               
chr14:11981982-11981805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
173-354
               

               
Cow position:
               
chr14:19513041-19513228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
173-357
               

               
Cow position:
               
chr14:8989265-8989452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
173-366
               

               
Cow position:
               
chr14:31399911-31399709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
173-367
               

               
Cow position:
               
chr14:35650873-35651069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr14:6490373-6490581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr14:43249913-43249704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
173-403
               

               
Cow position:
               
chr14:27791859-27791624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
173-406
               

               
Cow position:
               
chr14:40230308-40230551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
173-409
               

               
Cow position:
               
chr14:17013837-17013589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
173-414
               

               
Cow position:
               
chr14:20467784-20468027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
173-415
               

               
Cow position:
               
chr14:7317165-7316906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-415
               

               
Cow position:
               
chr14:46735646-46735384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr14:18238482-18238216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr14:21018442-21018186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr14:7960089-7959847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr14:19618429-19618681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr14:24992141-24991892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
173-427
               

               
Cow position:
               
chr14:5501823-5502093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-427
               

               
Cow position:
               
chr14:18484912-18485185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-427
               

               
Cow position:
               
chr14:23055933-23055673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
173-429
               

               
Cow position:
               
chr14:106246-106512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
173-430
               

               
Cow position:
               
chr14:33538600-33538858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
173-430
               

               
Cow position:
               
chr14:40269512-40269779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
173-430
               

               
Cow position:
               
chr14:41479330-41479599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
173-431
               

               
Cow position:
               
chr14:13006832-13006568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
173-431
               

               
Cow position:
               
chr14:39821495-39821225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr14:50363125-50362857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr14:20600710-20600447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr14:35381917-35381650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
173-439
               

               
Cow position:
               
chr14:41211198-41210907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
173-446
               

               
Cow position:
               
chr14:10702505-10702788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
173-446
               

               
Cow position:
               
chr14:28988020-28987745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr14:22583467-22583192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-451
               

               
Cow position:
               
chr14:10907048-10906756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
173-452
               

               
Cow position:
               
chr14:39769894-39770186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
173-457
               

               
Cow position:
               
chr14:48427405-48427114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-459
               

               
Cow position:
               
chr14:20640292-20640589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
173-459
               

               
Cow position:
               
chr14:42154632-42154931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
173-465
               

               
Cow position:
               
chr14:14326775-14327078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr14:18904279-18904579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
176-375
               

               
Cow position:
               
chr14:39519021-39518823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
176-377
               

               
Cow position:
               
chr14:27848526-27848323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
176-377
               

               
Cow position:
               
chr14:39618051-39618251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
102, 23
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr14:47507430-47507199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
176-445
               

               
Cow position:
               
chr14:34124850-34125131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
176-459
               

               
Cow position:
               
chr14:21538156-21538413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
176-461
               

               
Cow position:
               
chr14:35544189-35544478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
176-463
               

               
Cow position:
               
chr14:24417210-24416919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
177-392
               

               
Cow position:
               
chr14:13634380-13634602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
178-386
               

               
Cow position:
               
chr14:35607130-35607343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
178-431
               

               
Cow position:
               
chr14:9029359-9029606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
182-425
               

               
Cow position:
               
chr14:9901494-9901248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
191-394
               

               
Cow position:
               
chr14:36709437-36709229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
192-347
               

               
Cow position:
               
chr14:28605492-28605329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
192-362
               

               
Cow position:
               
chr14:43032120-43031950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
87, 101
               

               
Conread position:
               
192-409
               

               
Cow position:
               
chr14:23107642-23107412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
192-419
               

               
Cow position:
               
chr14:33209043-33209275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
192-423
               

               
Cow position:
               
chr14:14280733-14280484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr14:8488500-8488250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
192-464
               

               
Cow position:
               
chr14:41128206-41127927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
192-469
               

               
Cow position:
               
chr14:27312740-27312454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 240
               

               
Conread position:
               
195-386
               

               
Cow position:
               
chr14:9285460-9285266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
198-437
               

               
Cow position:
               
chr14:445708-445476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
198-449
               

               
Cow position:
               
chr14:34082846-34083098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
199-362
               

               
Cow position:
               
chr14:13997409-13997574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
199-364
               

               
Cow position:
               
chr14:37640541-37640374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
199-422
               

               
Cow position:
               
chr14:28378673-28378432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
199-426
               

               
Cow position:
               
chr14:42330663-42330417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
200-433
               

               
Cow position:
               
chr14:49021596-49021840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
200-461
               

               
Cow position:
               
chr14:46489948-46490220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
202-376
               

               
Cow position:
               
chr14:34020996-34020812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
202-427
               

               
Cow position:
               
chr14:23154578-23154819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
202-433
               

               
Cow position:
               
chr14:25779400-25779157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
202-461
               

               
Cow position:
               
chr14:33714382-33714639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
88, 72
               

               
Conread position:
               
203-349
               

               
Cow position:
               
chr14:42260252-42260407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
203-419
               

               
Cow position:
               
chr14:19624395-19624160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
204-375
               

               
Cow position:
               
chr14:34329355-34329527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
204-387
               

               
Cow position:
               
chr14:34330843-34330661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
205-344
               

               
Cow position:
               
chr14:36585656-36585800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
205-354
               

               
Cow position:
               
chr14:43693382-43693539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
205-377
               

               
Cow position:
               
chr14:18941001-18941178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
205-399
               

               
Cow position:
               
chr14:7291098-7290893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
205-413
               

               
Cow position:
               
chr14:23729424-23729644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 67
               

               
Conread position:
               
205-431
               

               
Cow position:
               
chr14:4649713-4649945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 195
               

               
Conread position:
               
205-461
               

               
Cow position:
               
chr14:10078560-10078307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
205-461
               

               
Cow position:
               
chr14:45677526-45677268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
205-469
               

               
Cow position:
               
chr14:24894063-24893801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
206-357
               

               
Cow position:
               
chr14:39616607-39616770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr14:8495455-8495289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
206-376
               

               
Cow position:
               
chr14:40461877-40461705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr14:9110431-9110606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr14:27362346-27362164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr14:9875693-9875510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
206-405
               

               
Cow position:
               
chr14:11507941-11508156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-414
               

               
Cow position:
               
chr14:21964418-21964198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
206-414
               

               
Cow position:
               
chr14:39433962-39434180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
206-415
               

               
Cow position:
               
chr14:8784477-8784262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr14:6419016-6419230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr14:47027075-47027294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
206-430
               

               
Cow position:
               
chr14:28090670-28090912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr14:7558130-7558373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr14:8848550-8848317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr14:12488400-12488636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr14:21284931-21284687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr14:24237120-24236891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr14:26442036-26442277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr14:35711878-35712116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
206-432
               

               
Cow position:
               
chr14:44742085-44742321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr14:22967053-22966815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr14:25403642-25403875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr14:33828451-33828222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
206-435
               

               
Cow position:
               
chr14:41756560-41756318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 37
               

               
Conread position:
               
206-437
               

               
Cow position:
               
chr14:4109171-4109416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
206-445
               

               
Cow position:
               
chr14:20932920-20932661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
206-446
               

               
Cow position:
               
chr14:33326093-33326349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
206-447
               

               
Cow position:
               
chr14:33751813-33751580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
206-450
               

               
Cow position:
               
chr14:14621884-14622135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
162, 30
               

               
Conread position:
               
206-451
               

               
Cow position:
               
chr14:45068785-45069022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-452
               

               
Cow position:
               
chr14:15913252-15913507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
206-453
               

               
Cow position:
               
chr14:25695682-25695431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-457
               

               
Cow position:
               
chr14:18345429-18345689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr14:5836206-5835937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
207-357
               

               
Cow position:
               
chr14:35360500-35360345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
207-385
               

               
Cow position:
               
chr14:41749463-41749640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr14:26620920-26620732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
207-395
               

               
Cow position:
               
chr14:25885800-25885611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
207-412
               

               
Cow position:
               
chr14:6735565-6735777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
207-413
               

               
Cow position:
               
chr14:19633483-19633260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
207-419
               

               
Cow position:
               
chr14:48412576-48412805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
207-429
               

               
Cow position:
               
chr14:32452562-32452317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
207-459
               

               
Cow position:
               
chr14:32574450-32574209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
208-420
               

               
Cow position:
               
chr14:19863141-19863359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
208-420
               

               
Cow position:
               
chr14:35700731-35700500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
208-425
               

               
Cow position:
               
chr14:38143814-38144040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
208-436
               

               
Cow position:
               
chr14:12856895-12856663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
208-439
               

               
Cow position:
               
chr14:29605937-29606168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
208-441
               

               
Cow position:
               
chr14:12602176-12601928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
208-450
               

               
Cow position:
               
chr14:28304486-28304740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
208-461
               

               
Cow position:
               
chr14:23712986-23712727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
209-469
               

               
Cow position:
               
chr14:19593841-19594106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
210-387
               

               
Cow position:
               
chr14:38295978-38296164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
210-416
               

               
Cow position:
               
chr14:50589094-50589305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
210-422
               

               
Cow position:
               
chr14:12613805-12614022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
157, 26
               

               
Conread position:
               
210-423
               

               
Cow position:
               
chr14:11819826-11820052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
210-430
               

               
Cow position:
               
chr14:35018458-35018685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
212-377
               

               
Cow position:
               
chr14:19996614-19996441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
212-424
               

               
Cow position:
               
chr14:3564569-3564351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
212-435
               

               
Cow position:
               
chr14:13810233-13809998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 224
               

               
Conread position:
               
213-400
               

               
Cow position:
               
chr14:14466185-14466383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
213-432
               

               
Cow position:
               
chr14:18657305-18657543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
213-469
               

               
Cow position:
               
chr14:44258209-44257956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
214-420
               

               
Cow position:
               
chr14:11614924-11615144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr14:10912679-10912903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
214-433
               

               
Cow position:
               
chr14:8102072-8101850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
154, 57
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr14:39302071-39302270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr14:39926483-39926263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
216-469
               

               
Cow position:
               
chr14:41716399-41716148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
218-387
               

               
Cow position:
               
chr14:47385925-47385760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
218-388
               

               
Cow position:
               
chr14:42918379-42918205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 5
               

               
Conread position:
               
218-450
               

               
Cow position:
               
chr14:8964832-8964591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
221-405
               

               
Cow position:
               
chr14:8006051-8006238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
221-425
               

               
Cow position:
               
chr14:40034257-40034055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
221-464
               

               
Cow position:
               
chr14:47609301-47609552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
221-467
               

               
Cow position:
               
chr14:17899771-17899514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
222-408
               

               
Cow position:
               
chr14:11810284-11810485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
222-423
               

               
Cow position:
               
chr14:47672597-47672816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
223-450
               

               
Cow position:
               
chr14:36554866-36555112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
224-401
               

               
Cow position:
               
chr14:6541438-6541606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
226-431
               

               
Cow position:
               
chr14:48400053-48399847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
227-425
               

               
Cow position:
               
chr14:36289535-36289730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
140, 41
               

               
Conread position:
               
227-433
               

               
Cow position:
               
chr14:34355421-34355635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
227-446
               

               
Cow position:
               
chr14:12520038-12520256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
136, 41
               

               
Conread position:
               
228-467
               

               
Cow position:
               
chr14:19129791-19129539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
229-376
               

               
Cow position:
               
chr14:17397326-17397478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
229-431
               

               
Cow position:
               
chr14:17841008-17841226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
229-441
               

               
Cow position:
               
chr14:10609968-10609743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
230-386
               

               
Cow position:
               
chr14:22865622-22865777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
230-424
               

               
Cow position:
               
chr14:10858710-10858503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
6, 42
               

               
Conread position:
               
235-425
               

               
Cow position:
               
chr14:39918490-39918690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
235-443
               

               
Cow position:
               
chr14:50055674-50055441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
240-469
               

               
Cow position:
               
chr14:11043222-11043458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
249-431
               

               
Cow position:
               
chr14:28114924-28115121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
279-435
               

               
Cow position:
               
chr14:37435072-37435238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
48, 155
               

               
Conread position:
               
288-425
               

               
Cow position:
               
chr14:33830511-33830365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               
Show alignments to all cow chromosomes.