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Cow genome map

           
Conread name:
           
Emb1-C0005188_E08
        

               
Conread position:
               
4-153
               

               
Cow position:
               
chr15:8099395-8099546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr15:7966055-7965886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
143, 5
               

               
Conread position:
               
19-141
               

               
Cow position:
               
chr15:40105794-40105917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
24-174
               

               
Cow position:
               
chr15:7934258-7934404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
24-178
               

               
Cow position:
               
chr15:35735506-35735654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
24-183
               

               
Cow position:
               
chr15:24295025-24295183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
24-194
               

               
Cow position:
               
chr15:36642861-36643032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
31-174
               

               
Cow position:
               
chr15:4682166-4682309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
31-180
               

               
Cow position:
               
chr15:4961581-4961726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
31-186
               

               
Cow position:
               
chr15:51714891-51715048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
43-178
               

               
Cow position:
               
chr15:444548-444684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
54-182
               

               
Cow position:
               
chr15:369202-369073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
107-431
               

               
Cow position:
               
chr15:33605364-33605043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
135-347
               

               
Cow position:
               
chr15:12809505-12809728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
141-349
               

               
Cow position:
               
chr15:34176052-34176262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr15:13669496-13669714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr15:26078961-26079175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
142-413
               

               
Cow position:
               
chr15:25208358-25208635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
142-432
               

               
Cow position:
               
chr15:4373884-4373584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
142-459
               

               
Cow position:
               
chr15:33306515-33306197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
143-377
               

               
Cow position:
               
chr15:14505835-14505597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
144-413
               

               
Cow position:
               
chr15:10336158-10335884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
147-405
               

               
Cow position:
               
chr15:11658159-11658433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
147-424
               

               
Cow position:
               
chr15:47274783-47274490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
150-410
               

               
Cow position:
               
chr15:16307813-16307544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
150-450
               

               
Cow position:
               
chr15:22532063-22531752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
162-433
               

               
Cow position:
               
chr15:12316312-12316033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
162-458
               

               
Cow position:
               
chr15:363403-363114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
163-450
               

               
Cow position:
               
chr15:20482443-20482757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
165-367
               

               
Cow position:
               
chr15:31992910-31992708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
165-367
               

               
Cow position:
               
chr15:47803910-47803712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
165-414
               

               
Cow position:
               
chr15:19119233-19119478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
165-429
               

               
Cow position:
               
chr15:37985173-37985435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
165-439
               

               
Cow position:
               
chr15:19781918-19781654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
165-457
               

               
Cow position:
               
chr15:16823326-16823025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
166-424
               

               
Cow position:
               
chr15:23767874-23768142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
172-344
               

               
Cow position:
               
chr15:12359632-12359450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
172-413
               

               
Cow position:
               
chr15:23775585-23775815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
172-431
               

               
Cow position:
               
chr15:13387457-13387189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr15:4485519-4485312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr15:18284617-18284408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
173-385
               

               
Cow position:
               
chr15:30316211-30316430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 62
               

               
Conread position:
               
173-386
               

               
Cow position:
               
chr15:41087488-41087703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-387
               

               
Cow position:
               
chr15:34255367-34255580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr15:22168438-22168185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
173-414
               

               
Cow position:
               
chr15:4676631-4676882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr15:237103-236852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr15:20458925-20459189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr15:41583291-41583026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 98
               

               
Conread position:
               
173-431
               

               
Cow position:
               
chr15:42143224-42142970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
173-438
               

               
Cow position:
               
chr15:16543089-16543349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
173-439
               

               
Cow position:
               
chr15:26404644-26404385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
173-444
               

               
Cow position:
               
chr15:21608356-21608625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
196, 26
               

               
Conread position:
               
173-444
               

               
Cow position:
               
chr15:25666840-25667127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
173-446
               

               
Cow position:
               
chr15:18720689-18720402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
173-446
               

               
Cow position:
               
chr15:27281237-27280964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
173-446
               

               
Cow position:
               
chr15:50957420-50957707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
173-446
               

               
Cow position:
               
chr15:53019772-53019494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr15:45044-45326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr15:35838711-35838999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr15:51632670-51632947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
173-453
               

               
Cow position:
               
chr15:44256852-44256565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
173-459
               

               
Cow position:
               
chr15:14871126-14870828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
173-459
               

               
Cow position:
               
chr15:34104641-34104352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr15:13515744-13515452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr15:24044717-24045013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
109, 101
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr15:20534075-20534372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr15:33976318-33976611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
174-430
               

               
Cow position:
               
chr15:7749773-7750022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
186, 7
               

               
Conread position:
               
176-363
               

               
Cow position:
               
chr15:29542369-29542181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
176-377
               

               
Cow position:
               
chr15:46611290-46611098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
176-388
               

               
Cow position:
               
chr15:28039124-28038919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr15:25584717-25584953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
176-407
               

               
Cow position:
               
chr15:6282558-6282798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
176-416
               

               
Cow position:
               
chr15:21388795-21389044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
176-424
               

               
Cow position:
               
chr15:20352211-20351947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
176-435
               

               
Cow position:
               
chr15:17084582-17084321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
177-416
               

               
Cow position:
               
chr15:20472175-20472421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
177-431
               

               
Cow position:
               
chr15:33681028-33680762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
177-446
               

               
Cow position:
               
chr15:31949371-31949086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
177-446
               

               
Cow position:
               
chr15:39490280-39490563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
177-449
               

               
Cow position:
               
chr15:23180793-23180531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
178-384
               

               
Cow position:
               
chr15:8629910-8630119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
179-416
               

               
Cow position:
               
chr15:16583343-16583572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
111, 20
               

               
Conread position:
               
179-433
               

               
Cow position:
               
chr15:11362809-11363069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
182-376
               

               
Cow position:
               
chr15:18206139-18206340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
182-401
               

               
Cow position:
               
chr15:33679071-33678840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
182-405
               

               
Cow position:
               
chr15:30800252-30800018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
185-413
               

               
Cow position:
               
chr15:29604346-29604579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
192-346
               

               
Cow position:
               
chr15:53012326-53012167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr15:31085896-31085707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr15:4623838-4623636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr15:9062232-9062460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr15:14020833-14020600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
192-420
               

               
Cow position:
               
chr15:4535269-4535031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr15:38883519-38883261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr15:17100354-17100603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
192-459
               

               
Cow position:
               
chr15:24994166-24994425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
192-469
               

               
Cow position:
               
chr15:45323145-45322859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
193-430
               

               
Cow position:
               
chr15:21801810-21802054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
196-420
               

               
Cow position:
               
chr15:43248413-43248651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
197-420
               

               
Cow position:
               
chr15:51831235-51831475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
197-428
               

               
Cow position:
               
chr15:12723436-12723200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
197-432
               

               
Cow position:
               
chr15:24038051-24038290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
198-360
               

               
Cow position:
               
chr15:52197958-52198118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
198-425
               

               
Cow position:
               
chr15:53680412-53680648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
84, 73
               

               
Conread position:
               
199-423
               

               
Cow position:
               
chr15:38898780-38898539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
199-445
               

               
Cow position:
               
chr15:24616918-24616667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
199-469
               

               
Cow position:
               
chr15:23798164-23798450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
200-431
               

               
Cow position:
               
chr15:19279744-19279977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
200-452
               

               
Cow position:
               
chr15:11011255-11011515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 71
               

               
Conread position:
               
200-461
               

               
Cow position:
               
chr15:9871057-9871331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
200-461
               

               
Cow position:
               
chr15:40009296-40009568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
201-356
               

               
Cow position:
               
chr15:9642786-9642627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
201-419
               

               
Cow position:
               
chr15:29861713-29861491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
202-416
               

               
Cow position:
               
chr15:23332534-23332751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
202-433
               

               
Cow position:
               
chr15:36781984-36782218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
202-434
               

               
Cow position:
               
chr15:6462150-6462391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
203-433
               

               
Cow position:
               
chr15:35642371-35642127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
79, 68
               

               
Conread position:
               
205-357
               

               
Cow position:
               
chr15:31855171-31855326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
205-381
               

               
Cow position:
               
chr15:52739775-52739957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
205-414
               

               
Cow position:
               
chr15:53481793-53481583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
205-415
               

               
Cow position:
               
chr15:19403326-19403106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
205-447
               

               
Cow position:
               
chr15:36621767-36621501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
205-450
               

               
Cow position:
               
chr15:34140329-34140074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
205-452
               

               
Cow position:
               
chr15:30047187-30047451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 153
               

               
Conread position:
               
205-461
               

               
Cow position:
               
chr15:6331709-6331953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
206-344
               

               
Cow position:
               
chr15:13595-13738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr15:5984258-5984423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
142, 65
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr15:22751799-22751622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr15:15041086-15041272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
206-399
               

               
Cow position:
               
chr15:26896364-26896567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-409
               

               
Cow position:
               
chr15:27123202-27123414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
206-410
               

               
Cow position:
               
chr15:19186267-19186490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-413
               

               
Cow position:
               
chr15:45245202-45245414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 142
               

               
Conread position:
               
206-416
               

               
Cow position:
               
chr15:7430329-7430101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr15:22531409-22531186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
206-421
               

               
Cow position:
               
chr15:21941501-21941724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
206-428
               

               
Cow position:
               
chr15:4138483-4138246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
206-428
               

               
Cow position:
               
chr15:13554688-13554467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr15:22532589-22532347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr15:6657453-6657204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr15:44641245-44641004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
206-449
               

               
Cow position:
               
chr15:37716575-37716842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-459
               

               
Cow position:
               
chr15:53402654-53402909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
206-465
               

               
Cow position:
               
chr15:16112752-16112482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
206-467
               

               
Cow position:
               
chr15:1329753-1330031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
206-468
               

               
Cow position:
               
chr15:20370119-20370381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr15:2952782-2953056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr15:37238219-37238072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
207-405
               

               
Cow position:
               
chr15:43030675-43030892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
207-413
               

               
Cow position:
               
chr15:39406081-39405865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
207-416
               

               
Cow position:
               
chr15:5234658-5234877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
207-419
               

               
Cow position:
               
chr15:27972868-27973096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
207-420
               

               
Cow position:
               
chr15:6970331-6970109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr15:13683937-13684150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
163, 64
               

               
Conread position:
               
207-431
               

               
Cow position:
               
chr15:22137030-22136796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
207-433
               

               
Cow position:
               
chr15:41619839-41620084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
207-440
               

               
Cow position:
               
chr15:43827425-43827672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
207-457
               

               
Cow position:
               
chr15:15707773-15708024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
161, 37
               

               
Conread position:
               
208-353
               

               
Cow position:
               
chr15:25618236-25618382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
208-413
               

               
Cow position:
               
chr15:24128995-24128778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
208-416
               

               
Cow position:
               
chr15:22938986-22939198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
208-420
               

               
Cow position:
               
chr15:38846442-38846224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
208-423
               

               
Cow position:
               
chr15:21837035-21836819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
208-433
               

               
Cow position:
               
chr15:1298082-1297846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
208-433
               

               
Cow position:
               
chr15:14856138-14856360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
208-433
               

               
Cow position:
               
chr15:43626808-43626576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
208-436
               

               
Cow position:
               
chr15:33303679-33303434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 227
               

               
Conread position:
               
208-445
               

               
Cow position:
               
chr15:15215366-15215116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
208-446
               

               
Cow position:
               
chr15:39363671-39363917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
208-450
               

               
Cow position:
               
chr15:5730283-5730031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
208-461
               

               
Cow position:
               
chr15:34206851-34207108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
141, 63
               

               
Conread position:
               
208-465
               

               
Cow position:
               
chr15:50302532-50302264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 215
               

               
Conread position:
               
209-353
               

               
Cow position:
               
chr15:10450555-10450709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr15:52454790-52454613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
209-419
               

               
Cow position:
               
chr15:10615396-10615610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
209-428
               

               
Cow position:
               
chr15:28177807-28177582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
209-431
               

               
Cow position:
               
chr15:3572359-3572591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
209-433
               

               
Cow position:
               
chr15:36423000-36422765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
209-469
               

               
Cow position:
               
chr15:794668-794943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
209-469
               

               
Cow position:
               
chr15:5727983-5727728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
210-348
               

               
Cow position:
               
chr15:20328802-20328656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
210-423
               

               
Cow position:
               
chr15:29792568-29792792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
210-433
               

               
Cow position:
               
chr15:26911737-26911969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
210-461
               

               
Cow position:
               
chr15:6586369-6586631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
211-420
               

               
Cow position:
               
chr15:14322720-14322934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 60
               

               
Conread position:
               
211-431
               

               
Cow position:
               
chr15:21894125-21893891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
212-461
               

               
Cow position:
               
chr15:16476402-16476653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
212-469
               

               
Cow position:
               
chr15:8665240-8665522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
213-357
               

               
Cow position:
               
chr15:34284021-34284169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
213-413
               

               
Cow position:
               
chr15:40798085-40798301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
214-386
               

               
Cow position:
               
chr15:10284034-10283854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
214-433
               

               
Cow position:
               
chr15:39599780-39599550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chr15:15881273-15881015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
216-416
               

               
Cow position:
               
chr15:31857930-31857713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
60, 139
               

               
Conread position:
               
217-425
               

               
Cow position:
               
chr15:21523127-21522903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
218-409
               

               
Cow position:
               
chr15:22938441-22938631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chr15:37381967-37381739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
220-361
               

               
Cow position:
               
chr15:36787642-36787490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
221-377
               

               
Cow position:
               
chr15:26158285-26158445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
221-420
               

               
Cow position:
               
chr15:30002022-30001806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
221-423
               

               
Cow position:
               
chr15:21421274-21421056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
221-434
               

               
Cow position:
               
chr15:36392002-36391781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
221-469
               

               
Cow position:
               
chr15:16936525-16936768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
222-416
               

               
Cow position:
               
chr15:5633004-5632807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
222-416
               

               
Cow position:
               
chr15:41225231-41225436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
223-431
               

               
Cow position:
               
chr15:4501311-4501099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 154
               

               
Conread position:
               
225-461
               

               
Cow position:
               
chr15:47105365-47105127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
226-447
               

               
Cow position:
               
chr15:35112560-35112790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
227-433
               

               
Cow position:
               
chr15:22095448-22095231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
227-450
               

               
Cow position:
               
chr15:49922466-49922224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
227-451
               

               
Cow position:
               
chr15:12304968-12304734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
229-432
               

               
Cow position:
               
chr15:50322920-50322704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
229-433
               

               
Cow position:
               
chr15:16604147-16603926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
231-433
               

               
Cow position:
               
chr15:47842935-47843141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
231-469
               

               
Cow position:
               
chr15:4350287-4350525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
232-461
               

               
Cow position:
               
chr15:39598560-39598328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
234-450
               

               
Cow position:
               
chr15:11995705-11995937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
235-430
               

               
Cow position:
               
chr15:10088633-10088429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
236-452
               

               
Cow position:
               
chr15:50341433-50341207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
240-423
               

               
Cow position:
               
chr15:10846036-10845837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
244-431
               

               
Cow position:
               
chr15:27900194-27900398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
253-425
               

               
Cow position:
               
chr15:26918972-26919160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
254-429
               

               
Cow position:
               
chr15:11646189-11646376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
255-424
               

               
Cow position:
               
chr15:5071801-5071981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
279-447
               

               
Cow position:
               
chr15:34144885-34145062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
284-424
               

               
Cow position:
               
chr15:16667239-16667382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 5
               
Show alignments to all cow chromosomes.