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Cow genome map

           
Conread name:
           
Emb1-C0005188_E08
        

               
Conread position:
               
2-183
               

               
Cow position:
               
chr28:782690-782872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr28:17667000-17666826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr28:14705374-14705192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr28:5813307-5813487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr28:10071583-10071760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
23-185
               

               
Cow position:
               
chr28:1387086-1386925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
24-183
               

               
Cow position:
               
chr28:13460289-13460448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
156, 25
               

               
Conread position:
               
24-185
               

               
Cow position:
               
chr28:5798065-5798222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
155, 95
               

               
Conread position:
               
31-186
               

               
Cow position:
               
chr28:2988916-2988762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
34-182
               

               
Cow position:
               
chr28:10497687-10497539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
133-452
               

               
Cow position:
               
chr28:27428430-27428746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
236, 10
               

               
Conread position:
               
142-377
               

               
Cow position:
               
chr28:8372157-8372397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
142-385
               

               
Cow position:
               
chr28:4536157-4536385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
142-409
               

               
Cow position:
               
chr28:13693435-13693714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
142-430
               

               
Cow position:
               
chr28:6577345-6577625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
142-461
               

               
Cow position:
               
chr28:16211411-16211093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
143-409
               

               
Cow position:
               
chr28:17316551-17316830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
163-365
               

               
Cow position:
               
chr28:19133484-19133699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
163-421
               

               
Cow position:
               
chr28:25701149-25700898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
164-409
               

               
Cow position:
               
chr28:10172712-10172451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
167-461
               

               
Cow position:
               
chr28:18590985-18591279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
169-413
               

               
Cow position:
               
chr28:13267496-13267753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
169-429
               

               
Cow position:
               
chr28:34150825-34150542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
169-435
               

               
Cow position:
               
chr28:31972037-31971769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
171-349
               

               
Cow position:
               
chr28:5117863-5118040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
172-423
               

               
Cow position:
               
chr28:21380600-21380855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
172-425
               

               
Cow position:
               
chr28:9390646-9390385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
172-432
               

               
Cow position:
               
chr28:21598534-21598268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
172-450
               

               
Cow position:
               
chr28:7228665-7228381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr28:19358494-19358313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr28:13371448-13371250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr28:23616122-23616331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-384
               

               
Cow position:
               
chr28:14657415-14657632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
173-386
               

               
Cow position:
               
chr28:22322985-22323200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
173-387
               

               
Cow position:
               
chr28:12430329-12430538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
173-396
               

               
Cow position:
               
chr28:10589309-10589105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
173-405
               

               
Cow position:
               
chr28:5805239-5805470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 65
               

               
Conread position:
               
173-408
               

               
Cow position:
               
chr28:15272541-15272300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
173-409
               

               
Cow position:
               
chr28:11786986-11786755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-409
               

               
Cow position:
               
chr28:30303473-30303231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-410
               

               
Cow position:
               
chr28:6971619-6971387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr28:2279946-2279699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
173-416
               

               
Cow position:
               
chr28:11451755-11451494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr28:14933682-14933940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-421
               

               
Cow position:
               
chr28:21363478-21363720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr28:5931067-5931332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 98
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr28:4022102-4022364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr28:10682102-10681844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr28:26784748-26784485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
173-425
               

               
Cow position:
               
chr28:31987325-31987589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
173-427
               

               
Cow position:
               
chr28:12946664-12946927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-430
               

               
Cow position:
               
chr28:19222425-19222166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
173-430
               

               
Cow position:
               
chr28:34008233-34007958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 98
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr28:7698261-7697994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr28:22371956-22371699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr28:4282772-4282503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr28:5366425-5366160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
173-434
               

               
Cow position:
               
chr28:16085045-16085313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
173-439
               

               
Cow position:
               
chr28:30327364-30327098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
189, 29
               

               
Conread position:
               
173-440
               

               
Cow position:
               
chr28:10534209-10533940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
173-444
               

               
Cow position:
               
chr28:3751039-3751307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr28:25399606-25399876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
173-451
               

               
Cow position:
               
chr28:8911499-8911218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
173-457
               

               
Cow position:
               
chr28:7549342-7549054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-459
               

               
Cow position:
               
chr28:4587816-4588106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr28:3914430-3914724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr28:7751581-7751292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr28:4308178-4307883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
112, 22
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr28:4880544-4880248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr28:5771086-5771386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr28:21354944-21355247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
176-366
               

               
Cow position:
               
chr28:14997787-14997975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
176-430
               

               
Cow position:
               
chr28:7590461-7590198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
176-431
               

               
Cow position:
               
chr28:5553203-5552957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
176-433
               

               
Cow position:
               
chr28:26922649-26922381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
176-442
               

               
Cow position:
               
chr28:14150957-14151229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
176-463
               

               
Cow position:
               
chr28:25056694-25056976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
179-416
               

               
Cow position:
               
chr28:18139730-18139487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
182-357
               

               
Cow position:
               
chr28:16879539-16879372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
182-396
               

               
Cow position:
               
chr28:3479991-3480216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
191-377
               

               
Cow position:
               
chr28:23793569-23793382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
192-349
               

               
Cow position:
               
chr28:21873505-21873665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
192-388
               

               
Cow position:
               
chr28:14218743-14218541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr28:16370342-16370121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
192-425
               

               
Cow position:
               
chr28:4841664-4841420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr28:5773375-5773623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr28:22321155-22321414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
192-461
               

               
Cow position:
               
chr28:2862594-2862876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 163
               

               
Conread position:
               
192-461
               

               
Cow position:
               
chr28:8022376-8022094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
192-461
               

               
Cow position:
               
chr28:32747672-32747928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
176, 79
               

               
Conread position:
               
192-469
               

               
Cow position:
               
chr28:13176946-13176665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
91, 79
               

               
Conread position:
               
198-386
               

               
Cow position:
               
chr28:21129384-21129194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
198-450
               

               
Cow position:
               
chr28:34878234-34877963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 73
               

               
Conread position:
               
198-469
               

               
Cow position:
               
chr28:21104108-21103811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
199-378
               

               
Cow position:
               
chr28:25762769-25762953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
199-405
               

               
Cow position:
               
chr28:16450955-16450756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
199-430
               

               
Cow position:
               
chr28:23675884-23676122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
199-444
               

               
Cow position:
               
chr28:33884149-33884395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
199-461
               

               
Cow position:
               
chr28:2961082-2960823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
168, 28
               

               
Conread position:
               
199-461
               

               
Cow position:
               
chr28:11426805-11426533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
200-449
               

               
Cow position:
               
chr28:30608440-30608183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
201-450
               

               
Cow position:
               
chr28:27218062-27218328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
81, 71
               

               
Conread position:
               
202-431
               

               
Cow position:
               
chr28:16350300-16350072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
205-377
               

               
Cow position:
               
chr28:20760178-20759997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
205-387
               

               
Cow position:
               
chr28:23231320-23231134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
205-411
               

               
Cow position:
               
chr28:25806335-25806537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
162, 30
               

               
Conread position:
               
205-419
               

               
Cow position:
               
chr28:2814753-2814535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
205-431
               

               
Cow position:
               
chr28:5128981-5128748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
205-431
               

               
Cow position:
               
chr28:21868198-21868438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
205-436
               

               
Cow position:
               
chr28:10642273-10642027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
205-452
               

               
Cow position:
               
chr28:33051766-33052034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
205-461
               

               
Cow position:
               
chr28:3024166-3023905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
205-461
               

               
Cow position:
               
chr28:19026257-19025997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr28:7144535-7144712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr28:32813252-32813071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
206-407
               

               
Cow position:
               
chr28:11759790-11759587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
74, 87
               

               
Conread position:
               
206-408
               

               
Cow position:
               
chr28:15063592-15063379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
206-409
               

               
Cow position:
               
chr28:25563823-25564044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-412
               

               
Cow position:
               
chr28:7684930-7684717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-419
               

               
Cow position:
               
chr28:6059726-6059498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr28:23007981-23007760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr28:24996841-24996615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
206-430
               

               
Cow position:
               
chr28:10900567-10900801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-430
               

               
Cow position:
               
chr28:15375079-15374840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
206-432
               

               
Cow position:
               
chr28:25596379-25596614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr28:5817594-5817825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr28:5826695-5826937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr28:16441134-16441357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr28:17029968-17029730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr28:20313022-20313261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
206-441
               

               
Cow position:
               
chr28:3144143-3143891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
206-446
               

               
Cow position:
               
chr28:21844703-21844951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-452
               

               
Cow position:
               
chr28:29455910-29455655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-459
               

               
Cow position:
               
chr28:17638120-17637868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-464
               

               
Cow position:
               
chr28:18790758-18791033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr28:3408470-3408202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
207-343
               

               
Cow position:
               
chr28:12934014-12933873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
207-344
               

               
Cow position:
               
chr28:12938748-12938890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
207-366
               

               
Cow position:
               
chr28:8348905-8348739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
207-377
               

               
Cow position:
               
chr28:34229977-34230154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
207-385
               

               
Cow position:
               
chr28:4938586-4938768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
207-405
               

               
Cow position:
               
chr28:22279435-22279246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr28:28766162-28765927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
207-450
               

               
Cow position:
               
chr28:5236852-5236600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
207-461
               

               
Cow position:
               
chr28:3493036-3492775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
207-461
               

               
Cow position:
               
chr28:16386758-16386498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
208-377
               

               
Cow position:
               
chr28:12048950-12048780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
208-377
               

               
Cow position:
               
chr28:13936165-13936338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
208-420
               

               
Cow position:
               
chr28:21502144-21502367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
208-435
               

               
Cow position:
               
chr28:23775793-23776035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
208-447
               

               
Cow position:
               
chr28:19080099-19079843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-452
               

               
Cow position:
               
chr28:22345768-22346020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
208-464
               

               
Cow position:
               
chr28:31110256-31109987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
208-467
               

               
Cow position:
               
chr28:10879524-10879783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
208-469
               

               
Cow position:
               
chr28:16253106-16252840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr28:10888413-10888632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
209-425
               

               
Cow position:
               
chr28:19222847-19222619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
209-431
               

               
Cow position:
               
chr28:18717376-18717135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
209-446
               

               
Cow position:
               
chr28:2905330-2905568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr28:22500731-22500495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
209-450
               

               
Cow position:
               
chr28:7268186-7267939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
209-450
               

               
Cow position:
               
chr28:8408486-8408738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
209-450
               

               
Cow position:
               
chr28:25249105-25249358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
210-431
               

               
Cow position:
               
chr28:16686784-16687009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
210-431
               

               
Cow position:
               
chr28:24646291-24646520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
210-434
               

               
Cow position:
               
chr28:16244008-16243772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
210-469
               

               
Cow position:
               
chr28:22170967-22170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
211-404
               

               
Cow position:
               
chr28:4914350-4914137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
211-436
               

               
Cow position:
               
chr28:30978034-30978262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
212-433
               

               
Cow position:
               
chr28:25282960-25283187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
68, 5
               

               
Conread position:
               
212-461
               

               
Cow position:
               
chr28:11752392-11752131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
213-469
               

               
Cow position:
               
chr28:15044101-15043847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
214-377
               

               
Cow position:
               
chr28:14649102-14649271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
214-425
               

               
Cow position:
               
chr28:18354564-18354345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
214-450
               

               
Cow position:
               
chr28:20409158-20409396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
214-456
               

               
Cow position:
               
chr28:4070724-4070978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
214-457
               

               
Cow position:
               
chr28:16346771-16346527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
215-458
               

               
Cow position:
               
chr28:16109700-16109944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr28:6051490-6051720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
218-429
               

               
Cow position:
               
chr28:16204574-16204346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 5
               

               
Conread position:
               
218-457
               

               
Cow position:
               
chr28:9285619-9285366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
218-461
               

               
Cow position:
               
chr28:11423045-11422805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
155, 38
               

               
Conread position:
               
221-349
               

               
Cow position:
               
chr28:25498742-25498605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
221-386
               

               
Cow position:
               
chr28:9636695-9636519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
222-431
               

               
Cow position:
               
chr28:5658317-5658539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
223-430
               

               
Cow position:
               
chr28:34430663-34430439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
223-431
               

               
Cow position:
               
chr28:10606854-10606644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
224-442
               

               
Cow position:
               
chr28:33036701-33036478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
225-409
               

               
Cow position:
               
chr28:26340102-26340305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
225-422
               

               
Cow position:
               
chr28:19394395-19394592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
225-441
               

               
Cow position:
               
chr28:11884757-11884527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
228-433
               

               
Cow position:
               
chr28:5144754-5144534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
52, 210
               

               
Conread position:
               
229-424
               

               
Cow position:
               
chr28:9099704-9099912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
230-424
               

               
Cow position:
               
chr28:8656965-8656763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
230-456
               

               
Cow position:
               
chr28:7980649-7980413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
231-461
               

               
Cow position:
               
chr28:33163696-33163452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
235-420
               

               
Cow position:
               
chr28:8347510-8347705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
238-431
               

               
Cow position:
               
chr28:2738033-2737825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
279-425
               

               
Cow position:
               
chr28:18760218-18760068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
279-432
               

               
Cow position:
               
chr28:118231-118066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
284-423
               

               
Cow position:
               
chr28:19023967-19024117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 7
               
Show alignments to all cow chromosomes.