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Cow genome map

           
Conread name:
           
Emb1-C0005188_E08
        

               
Conread position:
               
4-167
               

               
Cow position:
               
chr4:41120289-41120455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr4:14821559-14821393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
31-183
               

               
Cow position:
               
chr4:26886846-26886694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
32-182
               

               
Cow position:
               
chr4:11111403-11111255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
32-386
               

               
Cow position:
               
chr4:62566973-62567330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
35-161
               

               
Cow position:
               
chr4:47254982-47254856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
52-167
               

               
Cow position:
               
chr4:21256382-21256498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
110-438
               

               
Cow position:
               
chr4:23382164-23381830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
128-348
               

               
Cow position:
               
chr4:11175743-11175974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr4:2244315-2244093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
142-425
               

               
Cow position:
               
chr4:2609915-2610197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
139, 29
               

               
Conread position:
               
142-450
               

               
Cow position:
               
chr4:561075-561393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
142-452
               

               
Cow position:
               
chr4:4185794-4186109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
142-461
               

               
Cow position:
               
chr4:8947071-8947392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
142-461
               

               
Cow position:
               
chr4:17112205-17111877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
142-461
               

               
Cow position:
               
chr4:66112401-66112075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
145-461
               

               
Cow position:
               
chr4:33433577-33433260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
145-461
               

               
Cow position:
               
chr4:51850869-51851202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
159-469
               

               
Cow position:
               
chr4:42480880-42481187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
165-359
               

               
Cow position:
               
chr4:55508722-55508523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
165-457
               

               
Cow position:
               
chr4:27540319-27540608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
165-461
               

               
Cow position:
               
chr4:14964464-14964774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
169-366
               

               
Cow position:
               
chr4:62471770-62471970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
171-405
               

               
Cow position:
               
chr4:54468591-54468346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr4:56226594-56226767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
173-353
               

               
Cow position:
               
chr4:61999745-61999568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
173-357
               

               
Cow position:
               
chr4:30814784-30814966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
173-366
               

               
Cow position:
               
chr4:52584675-52584482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr4:47315014-47314826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
194, 26
               

               
Conread position:
               
173-387
               

               
Cow position:
               
chr4:19597606-19597398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
173-409
               

               
Cow position:
               
chr4:22073604-22073365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
173-409
               

               
Cow position:
               
chr4:68944469-68944221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
173-410
               

               
Cow position:
               
chr4:45644606-45644359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
173-416
               

               
Cow position:
               
chr4:23647136-23646889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr4:22236768-22236519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr4:36724744-36724999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
173-421
               

               
Cow position:
               
chr4:67392665-67392921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr4:20633-20883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
173-429
               

               
Cow position:
               
chr4:44782081-44782342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
173-429
               

               
Cow position:
               
chr4:47773925-47773673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
173-431
               

               
Cow position:
               
chr4:27276836-27276573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 26
               

               
Conread position:
               
173-431
               

               
Cow position:
               
chr4:44839178-44838923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr4:59056132-59055893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
173-435
               

               
Cow position:
               
chr4:42672878-42673151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
173-436
               

               
Cow position:
               
chr4:27997391-27997659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
173-444
               

               
Cow position:
               
chr4:3388255-3388531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
173-457
               

               
Cow position:
               
chr4:53832758-53833038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
173-459
               

               
Cow position:
               
chr4:43148111-43148405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr4:48485700-48485990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr4:56233398-56233678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
173-464
               

               
Cow position:
               
chr4:23451389-23451090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-467
               

               
Cow position:
               
chr4:11872205-11871906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-467
               

               
Cow position:
               
chr4:46258188-46258494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
173-468
               

               
Cow position:
               
chr4:37915622-37915330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 26
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr4:19265280-19265579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr4:41097627-41097924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
175-461
               

               
Cow position:
               
chr4:51727792-51728073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
176-343
               

               
Cow position:
               
chr4:38945755-38945921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
176-386
               

               
Cow position:
               
chr4:58283387-58283175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
176-420
               

               
Cow position:
               
chr4:16239434-16239188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
176-420
               

               
Cow position:
               
chr4:32260137-32259884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
176-433
               

               
Cow position:
               
chr4:509188-508934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
176-440
               

               
Cow position:
               
chr4:16602343-16602071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
176-449
               

               
Cow position:
               
chr4:7258717-7258448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
176-450
               

               
Cow position:
               
chr4:1436009-1435740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
196, 29
               

               
Conread position:
               
176-450
               

               
Cow position:
               
chr4:19584414-19584708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
176-461
               

               
Cow position:
               
chr4:24744705-24744410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
176-467
               

               
Cow position:
               
chr4:14470858-14470567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
177-377
               

               
Cow position:
               
chr4:3990911-3990713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
177-420
               

               
Cow position:
               
chr4:23494640-23494885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
177-425
               

               
Cow position:
               
chr4:10731930-10732189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
177-433
               

               
Cow position:
               
chr4:24119200-24118932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
177-433
               

               
Cow position:
               
chr4:45589876-45589628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
177-441
               

               
Cow position:
               
chr4:51898713-51898985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
177-446
               

               
Cow position:
               
chr4:46060651-46060931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 94
               

               
Conread position:
               
177-461
               

               
Cow position:
               
chr4:42424090-42423809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
177-469
               

               
Cow position:
               
chr4:22138525-22138218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
177-469
               

               
Cow position:
               
chr4:43370139-43369842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
177-469
               

               
Cow position:
               
chr4:56409893-56410182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
178-430
               

               
Cow position:
               
chr4:68764229-68764492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
178-436
               

               
Cow position:
               
chr4:15623552-15623822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
181-457
               

               
Cow position:
               
chr4:28772362-28772075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
182-416
               

               
Cow position:
               
chr4:19558437-19558676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
169, 54
               

               
Conread position:
               
182-424
               

               
Cow position:
               
chr4:27292247-27291993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
182-429
               

               
Cow position:
               
chr4:11671166-11671424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
190-436
               

               
Cow position:
               
chr4:1034788-1035023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
190-457
               

               
Cow position:
               
chr4:21371118-21371383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
191-351
               

               
Cow position:
               
chr4:28789401-28789235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
191-441
               

               
Cow position:
               
chr4:51122776-51123027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 104
               

               
Conread position:
               
191-463
               

               
Cow position:
               
chr4:27529832-27530116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 80
               

               
Conread position:
               
192-414
               

               
Cow position:
               
chr4:45235140-45234913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 79
               

               
Conread position:
               
192-419
               

               
Cow position:
               
chr4:36755469-36755703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
192-420
               

               
Cow position:
               
chr4:22115326-22115568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
192-422
               

               
Cow position:
               
chr4:44612723-44612966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
192-423
               

               
Cow position:
               
chr4:54930696-54930456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
192-430
               

               
Cow position:
               
chr4:3836996-3837242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr4:51739983-51739734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
192-435
               

               
Cow position:
               
chr4:46591382-46591638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
193-387
               

               
Cow position:
               
chr4:44073049-44072848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
193-416
               

               
Cow position:
               
chr4:46597105-46597335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
194-431
               

               
Cow position:
               
chr4:19708663-19708902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
87, 78
               

               
Conread position:
               
197-423
               

               
Cow position:
               
chr4:27755582-27755336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
198-414
               

               
Cow position:
               
chr4:49212995-49212759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
198-450
               

               
Cow position:
               
chr4:10055937-10056202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 73
               

               
Conread position:
               
198-467
               

               
Cow position:
               
chr4:9815626-9815345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 157
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr4:42232395-42232608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
199-420
               

               
Cow position:
               
chr4:3440133-3440366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
199-420
               

               
Cow position:
               
chr4:44025090-44024859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
199-432
               

               
Cow position:
               
chr4:22528660-22528413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
199-434
               

               
Cow position:
               
chr4:6630564-6630319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 147
               

               
Conread position:
               
199-435
               

               
Cow position:
               
chr4:36841004-36841258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
199-452
               

               
Cow position:
               
chr4:1915851-1915591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
199-457
               

               
Cow position:
               
chr4:53208028-53208285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
169, 73
               

               
Conread position:
               
199-461
               

               
Cow position:
               
chr4:21392077-21391815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
200-430
               

               
Cow position:
               
chr4:65650397-65650158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
200-433
               

               
Cow position:
               
chr4:4672607-4672357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
200-433
               

               
Cow position:
               
chr4:25889105-25888856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
200-461
               

               
Cow position:
               
chr4:19744617-19744884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
201-377
               

               
Cow position:
               
chr4:65826126-65825942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 70
               

               
Conread position:
               
202-433
               

               
Cow position:
               
chr4:4321276-4321026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
202-450
               

               
Cow position:
               
chr4:23509319-23509588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
202-459
               

               
Cow position:
               
chr4:34337532-34337275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
205-377
               

               
Cow position:
               
chr4:5610337-5610161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
205-405
               

               
Cow position:
               
chr4:46668303-46668513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
205-413
               

               
Cow position:
               
chr4:29237417-29237204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
205-419
               

               
Cow position:
               
chr4:620419-620198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
205-419
               

               
Cow position:
               
chr4:45738749-45738519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
205-421
               

               
Cow position:
               
chr4:43543001-43542774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
205-423
               

               
Cow position:
               
chr4:26400690-26400925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
205-424
               

               
Cow position:
               
chr4:8769843-8770071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
205-431
               

               
Cow position:
               
chr4:69406101-69406321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
205-433
               

               
Cow position:
               
chr4:56570538-56570781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
205-434
               

               
Cow position:
               
chr4:12048978-12049221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
205-457
               

               
Cow position:
               
chr4:2141479-2141742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
205-458
               

               
Cow position:
               
chr4:17660472-17660194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
205-460
               

               
Cow position:
               
chr4:36893086-36893354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
205-461
               

               
Cow position:
               
chr4:29035648-29035908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
205-469
               

               
Cow position:
               
chr4:59785049-59785326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
206-343
               

               
Cow position:
               
chr4:9582-9442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-361
               

               
Cow position:
               
chr4:24671444-24671280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-361
               

               
Cow position:
               
chr4:46477205-46477042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
206-365
               

               
Cow position:
               
chr4:488707-488539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr4:11193916-11194098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr4:19306990-19307178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr4:59833674-59833863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
206-392
               

               
Cow position:
               
chr4:63459481-63459289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
206-405
               

               
Cow position:
               
chr4:21058651-21058437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
206-409
               

               
Cow position:
               
chr4:34171835-34171621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-412
               

               
Cow position:
               
chr4:25359339-25359563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
206-415
               

               
Cow position:
               
chr4:38999161-38999383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-416
               

               
Cow position:
               
chr4:46708797-46708568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
206-419
               

               
Cow position:
               
chr4:43495636-43495862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
206-424
               

               
Cow position:
               
chr4:11090952-11090734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
206-424
               

               
Cow position:
               
chr4:16339858-16339633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
206-424
               

               
Cow position:
               
chr4:22345281-22345058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-424
               

               
Cow position:
               
chr4:37620153-37619921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
206-425
               

               
Cow position:
               
chr4:4084712-4084484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
206-426
               

               
Cow position:
               
chr4:36730924-36731163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
206-429
               

               
Cow position:
               
chr4:285389-285616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
206-429
               

               
Cow position:
               
chr4:48499582-48499809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 29
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr4:5461119-5460892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr4:33395954-33395729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr4:44496118-44496342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-432
               

               
Cow position:
               
chr4:11901829-11901589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-432
               

               
Cow position:
               
chr4:48137648-48137884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr4:3850287-3850526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr4:15439331-15439553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
161, 9
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr4:29291256-29291491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr4:30690458-30690690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr4:59871232-59871454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
206-444
               

               
Cow position:
               
chr4:69305390-69305634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
206-446
               

               
Cow position:
               
chr4:65919352-65919600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
206-447
               

               
Cow position:
               
chr4:28377915-28377676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
206-449
               

               
Cow position:
               
chr4:54501715-54501461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr4:20299003-20299271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr4:20327981-20327713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 150
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr4:22051735-22051475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr4:46550118-46550376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr4:53100540-53100797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
206-465
               

               
Cow position:
               
chr4:10412113-10412382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
206-466
               

               
Cow position:
               
chr4:18974171-18974428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
206-468
               

               
Cow position:
               
chr4:34166237-34165968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr4:7964917-7964644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr4:39128263-39128546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr4:45775607-45775334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
207-366
               

               
Cow position:
               
chr4:27561131-27561294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
207-385
               

               
Cow position:
               
chr4:3340686-3340869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr4:2671533-2671353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
207-387
               

               
Cow position:
               
chr4:33910042-33910221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
207-409
               

               
Cow position:
               
chr4:48235374-48235588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
207-433
               

               
Cow position:
               
chr4:51630392-51630617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
207-447
               

               
Cow position:
               
chr4:33612628-33612369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
207-450
               

               
Cow position:
               
chr4:17474172-17474431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
207-451
               

               
Cow position:
               
chr4:16637863-16637611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
207-460
               

               
Cow position:
               
chr4:53208974-53209232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
207-461
               

               
Cow position:
               
chr4:35981724-35981992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
207-461
               

               
Cow position:
               
chr4:52748723-52748458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
208-351
               

               
Cow position:
               
chr4:10041774-10041923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
208-353
               

               
Cow position:
               
chr4:61969902-61969748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-357
               

               
Cow position:
               
chr4:14131252-14131402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
208-362
               

               
Cow position:
               
chr4:57721811-57721954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 63
               

               
Conread position:
               
208-368
               

               
Cow position:
               
chr4:52632234-52632071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-377
               

               
Cow position:
               
chr4:21064268-21064095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
208-382
               

               
Cow position:
               
chr4:52177404-52177221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-410
               

               
Cow position:
               
chr4:58834670-58834455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr4:33623454-33623668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 181
               

               
Conread position:
               
208-415
               

               
Cow position:
               
chr4:7430055-7430273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
208-416
               

               
Cow position:
               
chr4:395686-395887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
159, 63
               

               
Conread position:
               
208-419
               

               
Cow position:
               
chr4:5797703-5797923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
208-419
               

               
Cow position:
               
chr4:40823379-40823156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-420
               

               
Cow position:
               
chr4:5999458-5999231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
208-420
               

               
Cow position:
               
chr4:47348568-47348788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
208-422
               

               
Cow position:
               
chr4:49629233-49629442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
161, 63
               

               
Conread position:
               
208-425
               

               
Cow position:
               
chr4:49424574-49424792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-431
               

               
Cow position:
               
chr4:19142025-19142259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr4:54190836-54191062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
208-434
               

               
Cow position:
               
chr4:44665631-44665393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
208-450
               

               
Cow position:
               
chr4:55395504-55395755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
208-452
               

               
Cow position:
               
chr4:33097226-33096990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
160, 63
               

               
Conread position:
               
208-461
               

               
Cow position:
               
chr4:41867180-41867439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-465
               

               
Cow position:
               
chr4:37691572-37691312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
209-397
               

               
Cow position:
               
chr4:10471960-10472151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr4:5984308-5984090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
209-420
               

               
Cow position:
               
chr4:23853941-23854151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 62
               

               
Conread position:
               
209-423
               

               
Cow position:
               
chr4:41301254-41301025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
209-431
               

               
Cow position:
               
chr4:23445314-23445077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
209-432
               

               
Cow position:
               
chr4:961926-961681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
209-432
               

               
Cow position:
               
chr4:53763382-53763153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
209-452
               

               
Cow position:
               
chr4:24458360-24458116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
209-466
               

               
Cow position:
               
chr4:66548016-66547763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
158, 62
               

               
Conread position:
               
209-469
               

               
Cow position:
               
chr4:14414610-14414339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 234
               

               
Conread position:
               
210-361
               

               
Cow position:
               
chr4:46385840-46385679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
210-423
               

               
Cow position:
               
chr4:16736241-16736467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
210-446
               

               
Cow position:
               
chr4:7571147-7571393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
211-377
               

               
Cow position:
               
chr4:34310716-34310540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
211-468
               

               
Cow position:
               
chr4:1985388-1985650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
156, 87
               

               
Conread position:
               
211-469
               

               
Cow position:
               
chr4:123462-123205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
212-344
               

               
Cow position:
               
chr4:61066392-61066526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
212-422
               

               
Cow position:
               
chr4:657079-656849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chr4:13435482-13435714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
212-436
               

               
Cow position:
               
chr4:62983813-62983578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
213-377
               

               
Cow position:
               
chr4:2536574-2536741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr4:17201016-17201212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chr4:35940270-35940036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
213-446
               

               
Cow position:
               
chr4:1060521-1060280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
214-417
               

               
Cow position:
               
chr4:12260040-12259823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
214-433
               

               
Cow position:
               
chr4:49794421-49794641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
214-449
               

               
Cow position:
               
chr4:27664747-27665004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
215-392
               

               
Cow position:
               
chr4:25983970-25984148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
215-433
               

               
Cow position:
               
chr4:25879139-25879372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
215-433
               

               
Cow position:
               
chr4:45367479-45367712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
215-436
               

               
Cow position:
               
chr4:59008626-59008392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr4:5630009-5629758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chr4:19322335-19322086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
216-469
               

               
Cow position:
               
chr4:20157669-20157408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
217-420
               

               
Cow position:
               
chr4:12676558-12676766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
217-431
               

               
Cow position:
               
chr4:49089539-49089760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
217-461
               

               
Cow position:
               
chr4:24688604-24688349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
218-377
               

               
Cow position:
               
chr4:26549209-26549369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
218-411
               

               
Cow position:
               
chr4:41292234-41292029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chr4:42922100-42921893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chr4:65842015-65841807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
218-431
               

               
Cow position:
               
chr4:11099922-11099698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 5
               

               
Conread position:
               
218-469
               

               
Cow position:
               
chr4:12560783-12561033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 5
               

               
Conread position:
               
221-406
               

               
Cow position:
               
chr4:1495651-1495457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
224-387
               

               
Cow position:
               
chr4:3268583-3268413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
225-456
               

               
Cow position:
               
chr4:21233118-21232875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
226-461
               

               
Cow position:
               
chr4:21531887-21531647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
227-424
               

               
Cow position:
               
chr4:46370565-46370780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
228-377
               

               
Cow position:
               
chr4:20502411-20502556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
228-416
               

               
Cow position:
               
chr4:52497819-52497638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
228-420
               

               
Cow position:
               
chr4:34383581-34383382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
229-450
               

               
Cow position:
               
chr4:65538651-65538425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
140, 42
               

               
Conread position:
               
234-419
               

               
Cow position:
               
chr4:43295930-43295734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 37
               

               
Conread position:
               
235-405
               

               
Cow position:
               
chr4:23911826-23911637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr4:53999743-53999537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
237-461
               

               
Cow position:
               
chr4:19463255-19463492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
239-451
               

               
Cow position:
               
chr4:13693911-13693686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
240-461
               

               
Cow position:
               
chr4:41908024-41907805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
241-469
               

               
Cow position:
               
chr4:2601998-2602237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
243-420
               

               
Cow position:
               
chr4:22860935-22860752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
246-424
               

               
Cow position:
               
chr4:10999930-10999742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
247-430
               

               
Cow position:
               
chr4:37465809-37465624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 173
               

               
Conread position:
               
248-429
               

               
Cow position:
               
chr4:44973418-44973607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
249-433
               

               
Cow position:
               
chr4:27687700-27687899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
261-440
               

               
Cow position:
               
chr4:48321817-48322002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr4:1354818-1354657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
279-420
               

               
Cow position:
               
chr4:16593895-16594041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
279-446
               

               
Cow position:
               
chr4:3689520-3689685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
279-459
               

               
Cow position:
               
chr4:38935170-38935353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
281-425
               

               
Cow position:
               
chr4:33869474-33869624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
284-416
               

               
Cow position:
               
chr4:51768929-51769068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
284-461
               

               
Cow position:
               
chr4:13344363-13344534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               
Show alignments to all cow chromosomes.