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Cow genome map

           
Conread name:
           
Emb1-C0005188_E08
        

               
Conread position:
               
3-180
               

               
Cow position:
               
chr9:3566702-3566513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr9:7061941-7061762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
5-149
               

               
Cow position:
               
chr9:2000847-2000704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 5
               

               
Conread position:
               
23-138
               

               
Cow position:
               
chr9:5004162-5004278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
24-175
               

               
Cow position:
               
chr9:3803510-3803661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-183
               

               
Cow position:
               
chr9:1995742-1995582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
24-183
               

               
Cow position:
               
chr9:27034853-27035012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
156, 25
               

               
Conread position:
               
24-185
               

               
Cow position:
               
chr9:20308978-20308817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 130
               

               
Conread position:
               
28-174
               

               
Cow position:
               
chr9:28688276-28688425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
30-185
               

               
Cow position:
               
chr9:13476710-13476553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
34-136
               

               
Cow position:
               
chr9:9985574-9985676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
43-182
               

               
Cow position:
               
chr9:1980176-1980316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
61-171
               

               
Cow position:
               
chr9:1636156-1636266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
129-344
               

               
Cow position:
               
chr9:13186368-13186568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr9:23388330-23388549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
142-377
               

               
Cow position:
               
chr9:9443243-9443486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr9:28773466-28773225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
142-433
               

               
Cow position:
               
chr9:1520380-1520690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
142-433
               

               
Cow position:
               
chr9:54528864-54528559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
142-435
               

               
Cow position:
               
chr9:5433980-5433683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
142-443
               

               
Cow position:
               
chr9:42445624-42445939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
142-445
               

               
Cow position:
               
chr9:21459806-21460112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
142-447
               

               
Cow position:
               
chr9:19382673-19382364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
159-433
               

               
Cow position:
               
chr9:44467021-44467303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
163-431
               

               
Cow position:
               
chr9:34762519-34762798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
164-469
               

               
Cow position:
               
chr9:16300243-16300551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
165-427
               

               
Cow position:
               
chr9:44821982-44822253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
165-450
               

               
Cow position:
               
chr9:43871296-43871005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
165-461
               

               
Cow position:
               
chr9:6952414-6952129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
169-431
               

               
Cow position:
               
chr9:42998142-42998418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
5, 106
               

               
Conread position:
               
169-434
               

               
Cow position:
               
chr9:56253221-56252944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
172-347
               

               
Cow position:
               
chr9:5340948-5340775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
172-450
               

               
Cow position:
               
chr9:26391080-26390799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
173-344
               

               
Cow position:
               
chr9:5455608-5455435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
173-344
               

               
Cow position:
               
chr9:26099658-26099482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr9:21963294-21963471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
173-348
               

               
Cow position:
               
chr9:48017508-48017682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
173-349
               

               
Cow position:
               
chr9:26480289-26480121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
173-349
               

               
Cow position:
               
chr9:34696981-34697157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
173-349
               

               
Cow position:
               
chr9:55262264-55262439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
173-357
               

               
Cow position:
               
chr9:17410874-17411048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr9:8418061-8418253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr9:37510332-37510142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
173-366
               

               
Cow position:
               
chr9:33823406-33823222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr9:42585311-42585514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr9:47954910-47955117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-408
               

               
Cow position:
               
chr9:8612616-8612354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
173-411
               

               
Cow position:
               
chr9:9491103-9490862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr9:5393365-5393116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr9:50080731-50080979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-416
               

               
Cow position:
               
chr9:22227770-22228018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
173-416
               

               
Cow position:
               
chr9:35375736-35375492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
173-417
               

               
Cow position:
               
chr9:52504989-52505247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 21
               

               
Conread position:
               
173-419
               

               
Cow position:
               
chr9:36445936-36445690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr9:28983499-28983245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr9:38546719-38546475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
173-422
               

               
Cow position:
               
chr9:20739018-20738761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
173-427
               

               
Cow position:
               
chr9:61739231-61738980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
173-429
               

               
Cow position:
               
chr9:20038846-20039084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
247, 31
               

               
Conread position:
               
173-430
               

               
Cow position:
               
chr9:6933757-6934023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-431
               

               
Cow position:
               
chr9:23028115-23027856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
173-431
               

               
Cow position:
               
chr9:42498144-42497874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-431
               

               
Cow position:
               
chr9:49279766-49279517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
196, 20
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr9:18162837-18163107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr9:54610917-54611185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
173-432
               

               
Cow position:
               
chr9:61997281-61997548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr9:3388006-3387736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr9:26404104-26403832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr9:31640003-31640278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr9:54681816-54681554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
173-436
               

               
Cow position:
               
chr9:41416665-41416396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
173-437
               

               
Cow position:
               
chr9:8937463-8937185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
173-450
               

               
Cow position:
               
chr9:5510039-5509754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
173-452
               

               
Cow position:
               
chr9:8868820-8869108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
173-457
               

               
Cow position:
               
chr9:5226850-5227143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
173-457
               

               
Cow position:
               
chr9:34957737-34958026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
173-457
               

               
Cow position:
               
chr9:37017199-37016921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
173-461
               

               
Cow position:
               
chr9:33218637-33218928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
173-469
               

               
Cow position:
               
chr9:52484606-52484903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
176-341
               

               
Cow position:
               
chr9:62668716-62668546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
176-361
               

               
Cow position:
               
chr9:20237696-20237881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
176-365
               

               
Cow position:
               
chr9:36586507-36586697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
176-413
               

               
Cow position:
               
chr9:22433631-22433872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
185, 23
               

               
Conread position:
               
176-425
               

               
Cow position:
               
chr9:26434752-26435001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
176-428
               

               
Cow position:
               
chr9:34000300-34000569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
176-432
               

               
Cow position:
               
chr9:33093256-33093002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
176-433
               

               
Cow position:
               
chr9:21888481-21888214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
176-437
               

               
Cow position:
               
chr9:214151-214422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
176-450
               

               
Cow position:
               
chr9:9199473-9199750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
176-450
               

               
Cow position:
               
chr9:46316476-46316753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
176-461
               

               
Cow position:
               
chr9:36490583-36490872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
177-377
               

               
Cow position:
               
chr9:20406947-20406745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
177-420
               

               
Cow position:
               
chr9:39152376-39152618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
178-457
               

               
Cow position:
               
chr9:11299387-11299660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
179-344
               

               
Cow position:
               
chr9:13993979-13993805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 92
               

               
Conread position:
               
182-413
               

               
Cow position:
               
chr9:35101183-35100948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
182-434
               

               
Cow position:
               
chr9:41680042-41679793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
185, 16
               

               
Conread position:
               
186-366
               

               
Cow position:
               
chr9:4858843-4858665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 86
               

               
Conread position:
               
190-377
               

               
Cow position:
               
chr9:24904781-24904585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
191-349
               

               
Cow position:
               
chr9:33067349-33067178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
191-430
               

               
Cow position:
               
chr9:11102518-11102763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
191-433
               

               
Cow position:
               
chr9:30477499-30477729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
199, 14
               

               
Conread position:
               
192-341
               

               
Cow position:
               
chr9:49689239-49689084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
192-356
               

               
Cow position:
               
chr9:15054180-15054010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr9:52578231-52578424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
192-419
               

               
Cow position:
               
chr9:49764958-49764718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
84, 159
               

               
Conread position:
               
192-420
               

               
Cow position:
               
chr9:5400017-5399788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
192-430
               

               
Cow position:
               
chr9:49404056-49403809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr9:36999759-37000011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr9:33940909-33940652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr9:41789580-41789331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
192-452
               

               
Cow position:
               
chr9:9405753-9406018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 105
               

               
Conread position:
               
192-461
               

               
Cow position:
               
chr9:20091340-20091073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
194-357
               

               
Cow position:
               
chr9:18093364-18093530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 77
               

               
Conread position:
               
198-360
               

               
Cow position:
               
chr9:53109818-53109661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
198-377
               

               
Cow position:
               
chr9:5161773-5161953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
198-403
               

               
Cow position:
               
chr9:20318287-20318498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
198-452
               

               
Cow position:
               
chr9:1951974-1952235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
198-465
               

               
Cow position:
               
chr9:64091985-64091702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 158
               

               
Conread position:
               
198-467
               

               
Cow position:
               
chr9:8998651-8998369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
80, 73
               

               
Conread position:
               
199-361
               

               
Cow position:
               
chr9:62357236-62357400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
199-435
               

               
Cow position:
               
chr9:8724095-8723844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
199-461
               

               
Cow position:
               
chr9:7634563-7634297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
200-347
               

               
Cow position:
               
chr9:62034926-62034774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
200-422
               

               
Cow position:
               
chr9:40542407-40542179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
200-425
               

               
Cow position:
               
chr9:8338324-8338084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
201-419
               

               
Cow position:
               
chr9:52001300-52001066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
201-430
               

               
Cow position:
               
chr9:3070130-3070370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 70
               

               
Conread position:
               
201-446
               

               
Cow position:
               
chr9:17740650-17740902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
202-461
               

               
Cow position:
               
chr9:28726434-28726698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
202-461
               

               
Cow position:
               
chr9:56453624-56453362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
204-362
               

               
Cow position:
               
chr9:3216495-3216331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
204-377
               

               
Cow position:
               
chr9:64155566-64155748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
205-366
               

               
Cow position:
               
chr9:2977670-2977500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
205-377
               

               
Cow position:
               
chr9:30138414-30138240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
205-387
               

               
Cow position:
               
chr9:10118374-10118561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
205-388
               

               
Cow position:
               
chr9:3594236-3594428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
205-396
               

               
Cow position:
               
chr9:3379401-3379207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
205-425
               

               
Cow position:
               
chr9:58133735-58133963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
205-430
               

               
Cow position:
               
chr9:9416118-9416346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
205-431
               

               
Cow position:
               
chr9:36623163-36623392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
205-432
               

               
Cow position:
               
chr9:4861678-4861436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
205-433
               

               
Cow position:
               
chr9:5327540-5327305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
205-433
               

               
Cow position:
               
chr9:32371471-32371710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
205-433
               

               
Cow position:
               
chr9:53602701-53602474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
205-454
               

               
Cow position:
               
chr9:31347242-31346982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
205-457
               

               
Cow position:
               
chr9:55084008-55084274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
205-459
               

               
Cow position:
               
chr9:33681967-33681708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
205-461
               

               
Cow position:
               
chr9:22361303-22361036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
206-341
               

               
Cow position:
               
chr9:4962514-4962375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
206-357
               

               
Cow position:
               
chr9:33846787-33846945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr9:54666193-54666024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr9:15982790-15982973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr9:17785173-17785350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr9:31662757-31662575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
206-397
               

               
Cow position:
               
chr9:52689336-52689539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-405
               

               
Cow position:
               
chr9:3807449-3807665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
206-410
               

               
Cow position:
               
chr9:6192171-6192391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
206-410
               

               
Cow position:
               
chr9:33100854-33101066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-412
               

               
Cow position:
               
chr9:10308719-10308940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
206-414
               

               
Cow position:
               
chr9:28948140-28947923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-416
               

               
Cow position:
               
chr9:25958701-25958485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr9:8599891-8599664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr9:38344183-38343951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
206-422
               

               
Cow position:
               
chr9:9461367-9461597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-422
               

               
Cow position:
               
chr9:59172090-59172326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-425
               

               
Cow position:
               
chr9:32812634-32812400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
206-429
               

               
Cow position:
               
chr9:54997735-54997978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
206-430
               

               
Cow position:
               
chr9:5621742-5621988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
206-430
               

               
Cow position:
               
chr9:8997844-8997600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr9:10092106-10092341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr9:9552375-9552137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
206-433
               

               
Cow position:
               
chr9:64516809-64517052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
206-446
               

               
Cow position:
               
chr9:8548097-8547847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
206-446
               

               
Cow position:
               
chr9:44710109-44709858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
206-447
               

               
Cow position:
               
chr9:39428524-39428760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
206-448
               

               
Cow position:
               
chr9:23430858-23431107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
206-450
               

               
Cow position:
               
chr9:4928917-4928656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
206-451
               

               
Cow position:
               
chr9:26057164-26057412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
136, 19
               

               
Conread position:
               
206-452
               

               
Cow position:
               
chr9:12428215-12428475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
206-457
               

               
Cow position:
               
chr9:45141330-45141570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
206-457
               

               
Cow position:
               
chr9:45285243-45285505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 135
               

               
Conread position:
               
206-457
               

               
Cow position:
               
chr9:60037943-60037680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
206-459
               

               
Cow position:
               
chr9:29825317-29825063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr9:17871820-17872084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr9:20848224-20847955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr9:44831769-44832029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
206-464
               

               
Cow position:
               
chr9:18381148-18380885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
206-465
               

               
Cow position:
               
chr9:1997420-1997159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
161, 73
               

               
Conread position:
               
206-467
               

               
Cow position:
               
chr9:5246136-5245875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
206-468
               

               
Cow position:
               
chr9:6880058-6879789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
207-377
               

               
Cow position:
               
chr9:18008580-18008752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
207-413
               

               
Cow position:
               
chr9:9823232-9823438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
207-425
               

               
Cow position:
               
chr9:5319916-5319689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
207-432
               

               
Cow position:
               
chr9:8288904-8288667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
207-435
               

               
Cow position:
               
chr9:18110583-18110820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
207-469
               

               
Cow position:
               
chr9:7410069-7409784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
207-469
               

               
Cow position:
               
chr9:13670924-13670650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
208-349
               

               
Cow position:
               
chr9:14796494-14796633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
208-357
               

               
Cow position:
               
chr9:18215628-18215775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
208-416
               

               
Cow position:
               
chr9:20318791-20319015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
208-416
               

               
Cow position:
               
chr9:32306954-32307172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
208-416
               

               
Cow position:
               
chr9:34468307-34468516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
208-425
               

               
Cow position:
               
chr9:57951043-57951268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
208-433
               

               
Cow position:
               
chr9:35850184-35849951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
208-433
               

               
Cow position:
               
chr9:41513905-41513671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
208-461
               

               
Cow position:
               
chr9:5763344-5763607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
208-461
               

               
Cow position:
               
chr9:10144186-10144453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
208-463
               

               
Cow position:
               
chr9:11319358-11319610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
208-469
               

               
Cow position:
               
chr9:59794994-59795271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 228
               

               
Conread position:
               
209-423
               

               
Cow position:
               
chr9:30664494-30664726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
209-433
               

               
Cow position:
               
chr9:19903337-19903129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
183, 62
               

               
Conread position:
               
209-446
               

               
Cow position:
               
chr9:5141359-5141113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
209-467
               

               
Cow position:
               
chr9:51205006-51204747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
209-469
               

               
Cow position:
               
chr9:18002664-18002936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
210-377
               

               
Cow position:
               
chr9:50076349-50076169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr9:35203168-35202982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr9:20989170-20989399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
210-428
               

               
Cow position:
               
chr9:3169237-3169466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr9:44914812-44915045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
210-450
               

               
Cow position:
               
chr9:54437536-54437294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
211-437
               

               
Cow position:
               
chr9:26086350-26086108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
212-409
               

               
Cow position:
               
chr9:26577578-26577783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
212-433
               

               
Cow position:
               
chr9:41283310-41283062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
213-415
               

               
Cow position:
               
chr9:32625279-32625073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
213-415
               

               
Cow position:
               
chr9:37069288-37069504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
213-424
               

               
Cow position:
               
chr9:6225166-6225397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
213-425
               

               
Cow position:
               
chr9:5532233-5532003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
213-428
               

               
Cow position:
               
chr9:51566207-51566440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
213-450
               

               
Cow position:
               
chr9:1751616-1751368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
214-425
               

               
Cow position:
               
chr9:55287611-55287836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
215-413
               

               
Cow position:
               
chr9:30749306-30749519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr9:34374652-34374803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
216-431
               

               
Cow position:
               
chr9:19637361-19637586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
217-412
               

               
Cow position:
               
chr9:54677499-54677316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
217-447
               

               
Cow position:
               
chr9:4128506-4128749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
218-388
               

               
Cow position:
               
chr9:16745953-16745778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
218-388
               

               
Cow position:
               
chr9:41412035-41412217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chr9:4646054-4646272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
218-433
               

               
Cow position:
               
chr9:64559610-64559836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
218-469
               

               
Cow position:
               
chr9:64050280-64050543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
221-388
               

               
Cow position:
               
chr9:18419436-18419271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
221-425
               

               
Cow position:
               
chr9:32732412-32732633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 51
               

               
Conread position:
               
221-461
               

               
Cow position:
               
chr9:60110506-60110275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
222-424
               

               
Cow position:
               
chr9:47869278-47869067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
222-465
               

               
Cow position:
               
chr9:55118350-55118104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
223-409
               

               
Cow position:
               
chr9:48118431-48118624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 48
               

               
Conread position:
               
224-434
               

               
Cow position:
               
chr9:8534412-8534644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
225-440
               

               
Cow position:
               
chr9:41653058-41652828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
226-413
               

               
Cow position:
               
chr9:33598249-33598048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chr9:41995982-41995761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
226-457
               

               
Cow position:
               
chr9:34287062-34286829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
226-461
               

               
Cow position:
               
chr9:36827392-36827161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
227-388
               

               
Cow position:
               
chr9:8546585-8546423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 124
               

               
Conread position:
               
229-450
               

               
Cow position:
               
chr9:55890075-55889841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
231-433
               

               
Cow position:
               
chr9:34901852-34902062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
231-450
               

               
Cow position:
               
chr9:7363290-7363054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
235-414
               

               
Cow position:
               
chr9:38875315-38875510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
241-409
               

               
Cow position:
               
chr9:38614713-38614890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
243-433
               

               
Cow position:
               
chr9:50139532-50139334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
244-419
               

               
Cow position:
               
chr9:18216850-18217038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
271-469
               

               
Cow position:
               
chr9:8920216-8920008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
278-433
               

               
Cow position:
               
chr9:50667635-50667468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
279-433
               

               
Cow position:
               
chr9:28354728-28354565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
284-469
               

               
Cow position:
               
chr9:33038258-33038446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 5
               

               
Conread position:
               
297-457
               

               
Cow position:
               
chr9:30124112-30123949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
301-430
               

               
Cow position:
               
chr9:62151289-62151152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
305-450
               

               
Cow position:
               
chr9:11168914-11168760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               
Show alignments to all cow chromosomes.