Cow genome map

Conread name: Emb1-C0005188_H20

Conread position: 1-228
Cow position: chr1:12803367-12803575 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 39

Conread position: 1-228
Cow position: chr1:68818634-68818406 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 32, 200

Conread position: 1-253
Cow position: chr1:51444518-51444774 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 60

Conread position: 1-267
Cow position: chr1:30034900-30035161 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 17

Conread position: 1-268
Cow position: chr1:31342124-31341861 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 32, 14

Conread position: 1-273
Cow position: chr1:40532598-40532337 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 66

Conread position: 1-349
Cow position: chr1:63239969-63240320 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 1-358
Cow position: chr1:59202952-59202588 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 149

Conread position: 1-374
Cow position: chr1:57958288-57957914 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 264
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 10

Conread position: 1-408
Cow position: chr1:63044882-63044472 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 1-409
Cow position: chr1:69671346-69670932 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 1-409
Cow position: chr1:93112072-93111675 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 175

Conread position: 1-410
Cow position: chr1:24580681-24581082 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 233

Conread position: 1-412
Cow position: chr1:53309384-53308970 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 148

Conread position: 1-413
Cow position: chr1:61563312-61563741 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 297
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 90

Conread position: 1-414
Cow position: chr1:73443577-73443186 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 10

Conread position: 1-417
Cow position: chr1:57659885-57660295 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 1-417
Cow position: chr1:58418949-58419361 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 22

Conread position: 1-417
Cow position: chr1:61748175-61747761 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 49

Conread position: 1-417
Cow position: chr1:78290833-78291255 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 66

Conread position: 1-419
Cow position: chr1:6165257-6165676 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 74

Conread position: 1-419
Cow position: chr1:17938479-17938053 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-419
Cow position: chr1:24440786-24440361 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 1-419
Cow position: chr1:26811799-26811375 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 232

Conread position: 1-419
Cow position: chr1:44082984-44083383 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 274
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 89

Conread position: 1-419
Cow position: chr1:45006249-45006641 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 1-419
Cow position: chr1:50764431-50764832 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 9

Conread position: 1-419
Cow position: chr1:55780146-55780568 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 134

Conread position: 1-419
Cow position: chr1:56425188-56425612 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 27

Conread position: 1-419
Cow position: chr1:63048854-63049265 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 75

Conread position: 1-419
Cow position: chr1:65389832-65390261 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 232

Conread position: 1-419
Cow position: chr1:66490856-66491277 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 232

Conread position: 1-419
Cow position: chr1:67078551-67078127 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 1-419
Cow position: chr1:68281824-68282237 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 144

Conread position: 1-419
Cow position: chr1:71690831-71691253 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 93

Conread position: 1-424
Cow position: chr1:11854669-11854251 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 2-136
Cow position: chr1:81860234-81860099 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 2-172
Cow position: chr1:12872179-12872008 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 2-172
Cow position: chr1:84284138-84283967 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 148

Conread position: 2-184
Cow position: chr1:16372549-16372734 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 148

Conread position: 2-193
Cow position: chr1:47119233-47119427 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 148

Conread position: 2-219
Cow position: chr1:86593028-86592807 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 31, 149

Conread position: 2-221
Cow position: chr1:25178749-25178536 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 173

Conread position: 2-225
Cow position: chr1:73870128-73870356 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 2-226
Cow position: chr1:79590127-79590354 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 147

Conread position: 2-227
Cow position: chr1:7324347-7324575 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 34, 148

Conread position: 2-227
Cow position: chr1:21090741-21090969 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 148

Conread position: 2-227
Cow position: chr1:21165045-21165273 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 34, 148

Conread position: 2-227
Cow position: chr1:52510838-52510615 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 169, 21

Conread position: 2-227
Cow position: chr1:70037965-70037742 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 103

Conread position: 2-227
Cow position: chr1:73010260-73010488 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 34, 148

Conread position: 2-227
Cow position: chr1:85630612-85630840 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 34, 148

Conread position: 2-228
Cow position: chr1:61727803-61727582 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 178, 84

Conread position: 2-232
Cow position: chr1:29656462-29656697 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 196

Conread position: 2-255
Cow position: chr1:72864226-72864476 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 48

Conread position: 2-269
Cow position: chr1:11289113-11288838 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 151

Conread position: 2-270
Cow position: chr1:19775815-19775542 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 251

Conread position: 2-270
Cow position: chr1:28520927-28521201 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 34, 148

Conread position: 2-270
Cow position: chr1:99118760-99119034 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-273
Cow position: chr1:11018731-11019000 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 228, 30

Conread position: 2-273
Cow position: chr1:37542031-37541757 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 90

Conread position: 2-273
Cow position: chr1:38279464-38279185 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 214

Conread position: 2-276
Cow position: chr1:72103392-72103648 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 32, 15

Conread position: 2-280
Cow position: chr1:43449236-43448951 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 165

Conread position: 2-283
Cow position: chr1:57397038-57396760 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 56

Conread position: 2-283
Cow position: chr1:89793229-89793516 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 148

Conread position: 2-285
Cow position: chr1:61340044-61339755 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-289
Cow position: chr1:6240997-6240716 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 9

Conread position: 2-289
Cow position: chr1:46839065-46839344 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 9

Conread position: 2-291
Cow position: chr1:18087705-18088000 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-296
Cow position: chr1:92920960-92920661 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 266

Conread position: 2-306
Cow position: chr1:99572290-99571989 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 143

Conread position: 2-308
Cow position: chr1:3383043-3382731 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-310
Cow position: chr1:50619001-50618690 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 80

Conread position: 2-313
Cow position: chr1:70051515-70051812 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 74

Conread position: 2-315
Cow position: chr1:53311506-53311834 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 10

Conread position: 2-317
Cow position: chr1:57970317-57970025 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 33

Conread position: 2-322
Cow position: chr1:21534986-21534659 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 149

Conread position: 2-327
Cow position: chr1:48810918-48810586 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-330
Cow position: chr1:44127565-44127243 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 153

Conread position: 2-333
Cow position: chr1:93850577-93850914 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-341
Cow position: chr1:91890115-91889786 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 2-345
Cow position: chr1:52379569-52379919 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-345
Cow position: chr1:102431463-102431118 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-348
Cow position: chr1:60251150-60250798 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-356
Cow position: chr1:30079217-30079576 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-356
Cow position: chr1:42739972-42740332 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-356
Cow position: chr1:61203660-61204020 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-356
Cow position: chr1:73064059-73063706 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 2-358
Cow position: chr1:26722386-26722026 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 152

Conread position: 2-358
Cow position: chr1:62927745-62928107 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-363
Cow position: chr1:21507810-21507448 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 16

Conread position: 2-370
Cow position: chr1:7405947-7406321 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-370
Cow position: chr1:73967788-73968162 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-370
Cow position: chr1:79453484-79453113 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-372
Cow position: chr1:56746160-56746537 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-378
Cow position: chr1:32961227-32960840 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-379
Cow position: chr1:82369696-82370078 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 2-383
Cow position: chr1:52371248-52371635 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-384
Cow position: chr1:61220708-61221093 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 33

Conread position: 2-385
Cow position: chr1:100536424-100536823 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 370

Conread position: 2-388
Cow position: chr1:93857798-93858191 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-390
Cow position: chr1:13718561-13718169 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 2-390
Cow position: chr1:25053311-25052918 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 313

Conread position: 2-390
Cow position: chr1:30883384-30882985 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 151

Conread position: 2-395
Cow position: chr1:40509984-40509570 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 46

Conread position: 2-395
Cow position: chr1:73762269-73761869 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 2-395
Cow position: chr1:89431679-89432079 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-395
Cow position: chr1:98534872-98535287 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 276

Conread position: 2-396
Cow position: chr1:19884626-19884228 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 268

Conread position: 2-398
Cow position: chr1:5163065-5162666 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 233

Conread position: 2-400
Cow position: chr1:21114147-21113748 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 266

Conread position: 2-404
Cow position: chr1:53649928-53650327 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 232

Conread position: 2-404
Cow position: chr1:89112099-89112500 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 2-405
Cow position: chr1:99117291-99117703 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 159

Conread position: 2-407
Cow position: chr1:42875380-42874977 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 132

Conread position: 2-408
Cow position: chr1:46820890-46821301 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 148

Conread position: 2-408
Cow position: chr1:53371632-53372053 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 130

Conread position: 2-408
Cow position: chr1:70535187-70534760 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 89

Conread position: 2-408
Cow position: chr1:83060365-83059953 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 111

Conread position: 2-408
Cow position: chr1:99916715-99917128 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 2-408
Cow position: chr1:101787662-101787266 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 2-409
Cow position: chr1:59483587-59483177 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 2-409
Cow position: chr1:72766760-72766346 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 2-410
Cow position: chr1:2989759-2990174 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:7712056-7712465 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:8470886-8470472 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 159

Conread position: 2-410
Cow position: chr1:8517794-8517379 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:10725900-10726314 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 155

Conread position: 2-410
Cow position: chr1:11666265-11665850 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:12375028-12374613 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:17187964-17187549 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:17248387-17247972 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:18698706-18699121 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:19236221-19235806 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:19828703-19828304 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 147

Conread position: 2-410
Cow position: chr1:20527436-20527850 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:20832158-20832572 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:20846737-20846322 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:23861433-23861018 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:26536910-26536495 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:28714315-28714726 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:28811966-28811551 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-410
Cow position: chr1:29037816-29038231 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 255

Conread position: 2-410
Cow position: chr1:30281548-30281135 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:31535128-31535542 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:40058381-40058784 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 135

Conread position: 2-410
Cow position: chr1:40681455-40681039 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:47078904-47078491 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:49268160-49268571 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 147

Conread position: 2-410
Cow position: chr1:51967525-51967932 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 2-410
Cow position: chr1:54472138-54471723 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 156

Conread position: 2-410
Cow position: chr1:55273766-55273353 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 159

Conread position: 2-410
Cow position: chr1:56205534-56205123 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:56666376-56666791 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:61096776-61097191 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:61331687-61331272 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 159

Conread position: 2-410
Cow position: chr1:62507973-62507554 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 2-410
Cow position: chr1:63341196-63340782 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:66144976-66145391 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:68145695-68145280 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:69504098-69503683 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:71794809-71795223 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:72590088-72589673 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:73463242-73463657 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 2-410
Cow position: chr1:73565202-73564787 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:74513867-74513452 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:75403170-75403585 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:76878308-76878721 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 110

Conread position: 2-410
Cow position: chr1:77554722-77554312 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 95

Conread position: 2-410
Cow position: chr1:77748019-77748433 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:77924757-77925172 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 146

Conread position: 2-410
Cow position: chr1:79553772-79554186 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 46

Conread position: 2-410
Cow position: chr1:80564801-80564386 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:82479259-82479674 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:83136218-83136626 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 150

Conread position: 2-410
Cow position: chr1:83169718-83170133 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:84448901-84449316 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:86544862-86544452 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:89492954-89492550 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 56

Conread position: 2-410
Cow position: chr1:91673508-91673922 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:95456628-95457042 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:98354119-98353704 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:98617948-98618354 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 70

Conread position: 2-410
Cow position: chr1:99675060-99674645 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr1:102814749-102815164 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-413
Cow position: chr1:7415762-7416179 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 65

Conread position: 2-416
Cow position: chr1:14529183-14528769 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 37

Conread position: 2-416
Cow position: chr1:57506067-57506488 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-417
Cow position: chr1:4337043-4337455 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 2-417
Cow position: chr1:6197002-6196582 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 126

Conread position: 2-417
Cow position: chr1:8828297-8828718 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 192

Conread position: 2-417
Cow position: chr1:19483967-19483555 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 2-417
Cow position: chr1:32563259-32562841 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-417
Cow position: chr1:42888206-42887805 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 2-417
Cow position: chr1:51980261-51980669 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 70

Conread position: 2-417
Cow position: chr1:52054096-52054522 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 232

Conread position: 2-417
Cow position: chr1:71792206-71792627 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 88

Conread position: 2-417
Cow position: chr1:92196253-92196671 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 2-417
Cow position: chr1:102783813-102784221 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 2-418
Cow position: chr1:39235227-39234808 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-418
Cow position: chr1:78587182-78586759 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-418
Cow position: chr1:82567692-82568107 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 2-419
Cow position: chr1:2764392-2764829 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 237

Conread position: 2-419
Cow position: chr1:3263265-3263686 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 93

Conread position: 2-419
Cow position: chr1:3339942-3340364 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 61

Conread position: 2-419
Cow position: chr1:4375508-4375104 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 95

Conread position: 2-419
Cow position: chr1:5013522-5013098 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 154

Conread position: 2-419
Cow position: chr1:5505215-5505638 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 230

Conread position: 2-419
Cow position: chr1:8602700-8602276 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 231

Conread position: 2-419
Cow position: chr1:9595669-9595245 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 230

Conread position: 2-419
Cow position: chr1:10033814-10034227 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 112

Conread position: 2-419
Cow position: chr1:11199354-11198916 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 88

Conread position: 2-419
Cow position: chr1:13251269-13250847 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:13405109-13404685 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 6

Conread position: 2-419
Cow position: chr1:16117123-16116699 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:16797820-16797403 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 70

Conread position: 2-419
Cow position: chr1:18195871-18196295 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:19441264-19440845 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 261

Conread position: 2-419
Cow position: chr1:21258325-21257910 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 46

Conread position: 2-419
Cow position: chr1:21377282-21376863 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 288

Conread position: 2-419
Cow position: chr1:21576818-21577252 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 146

Conread position: 2-419
Cow position: chr1:22253350-22253760 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 59

Conread position: 2-419
Cow position: chr1:22481384-22480965 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 150

Conread position: 2-419
Cow position: chr1:25553080-25553502 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 230

Conread position: 2-419
Cow position: chr1:28876373-28876797 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:29428875-29429304 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 236

Conread position: 2-419
Cow position: chr1:30372181-30372591 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 70

Conread position: 2-419
Cow position: chr1:30531744-30531334 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 2-419
Cow position: chr1:31352350-31351938 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 45

Conread position: 2-419
Cow position: chr1:33716236-33716660 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 255

Conread position: 2-419
Cow position: chr1:33854543-33854966 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-419
Cow position: chr1:35598534-35598111 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 147

Conread position: 2-419
Cow position: chr1:36646175-36645752 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 140

Conread position: 2-419
Cow position: chr1:38711988-38712413 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-419
Cow position: chr1:40088652-40089066 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 271

Conread position: 2-419
Cow position: chr1:48827825-48828239 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 2-419
Cow position: chr1:52355396-52354974 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:52434301-52434721 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 192

Conread position: 2-419
Cow position: chr1:52755256-52754835 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 85

Conread position: 2-419
Cow position: chr1:53578332-53578755 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 227

Conread position: 2-419
Cow position: chr1:54116524-54116938 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 36

Conread position: 2-419
Cow position: chr1:54933204-54933627 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 2-419
Cow position: chr1:55043986-55043564 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 116

Conread position: 2-419
Cow position: chr1:55159107-55158682 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:56170236-56170659 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 80

Conread position: 2-419
Cow position: chr1:57363057-57362633 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 229

Conread position: 2-419
Cow position: chr1:57574310-57573896 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 68

Conread position: 2-419
Cow position: chr1:57679102-57678683 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 80

Conread position: 2-419
Cow position: chr1:58192529-58192106 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 11

Conread position: 2-419
Cow position: chr1:58340198-58340614 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 60

Conread position: 2-419
Cow position: chr1:61342430-61342012 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:63602512-63602088 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-419
Cow position: chr1:64717616-64717194 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 302

Conread position: 2-419
Cow position: chr1:64942260-64941852 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 2-419
Cow position: chr1:67831860-67831435 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 161

Conread position: 2-419
Cow position: chr1:68610496-68610078 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 35

Conread position: 2-419
Cow position: chr1:69770095-69770515 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 98

Conread position: 2-419
Cow position: chr1:71044783-71045204 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 89

Conread position: 2-419
Cow position: chr1:72086875-72087284 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:76618198-76617780 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 80

Conread position: 2-419
Cow position: chr1:76749112-76748695 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 26

Conread position: 2-419
Cow position: chr1:78921737-78921309 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 148

Conread position: 2-419
Cow position: chr1:79334711-79334286 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:82091171-82091592 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 2-419
Cow position: chr1:82879710-82880124 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 2-419
Cow position: chr1:82920863-82920441 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 86

Conread position: 2-419
Cow position: chr1:84446955-84447381 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 159

Conread position: 2-419
Cow position: chr1:85777183-85776762 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 2-419
Cow position: chr1:86599739-86599311 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 235

Conread position: 2-419
Cow position: chr1:88028101-88028512 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 42

Conread position: 2-419
Cow position: chr1:89090261-89089837 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 159

Conread position: 2-419
Cow position: chr1:89186182-89185765 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 70

Conread position: 2-419
Cow position: chr1:90393479-90393059 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 2-419
Cow position: chr1:91105318-91105738 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 145

Conread position: 2-419
Cow position: chr1:91902295-91902719 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-419
Cow position: chr1:94662929-94663353 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr1:100420874-100421284 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 147

Conread position: 2-419
Cow position: chr1:100591496-100591074 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 50

Conread position: 2-419
Cow position: chr1:100888232-100887807 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-421
Cow position: chr1:16573641-16573242 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 277
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 178, 33

Conread position: 2-421
Cow position: chr1:34533517-34533943 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-421
Cow position: chr1:53519940-53520348 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 2-421
Cow position: chr1:68602354-68601928 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-422
Cow position: chr1:3931064-3930637 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-422
Cow position: chr1:26446430-26446848 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 232

Conread position: 2-423
Cow position: chr1:17009456-17009028 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-423
Cow position: chr1:88179134-88179564 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 149

Conread position: 2-426
Cow position: chr1:72986734-72987162 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 199

Conread position: 2-428
Cow position: chr1:22012685-22012254 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 3-409
Cow position: chr1:22789678-22790085 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 148

Conread position: 3-417
Cow position: chr1:89484376-89484797 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 3-419
Cow position: chr1:88328203-88327784 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 44

Conread position: 3-421
Cow position: chr1:16973835-16973411 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 141

Conread position: 4-179
Cow position: chr1:64595032-64594856 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 4-217
Cow position: chr1:73404058-73404275 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 4-351
Cow position: chr1:90622946-90622602 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 147

Conread position: 4-356
Cow position: chr1:67913362-67913714 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 4-356
Cow position: chr1:72139470-72139827 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 149

Conread position: 4-378
Cow position: chr1:24655108-24655487 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 4-406
Cow position: chr1:101833675-101834070 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 113

Conread position: 4-408
Cow position: chr1:13579499-13579091 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 93

Conread position: 4-410
Cow position: chr1:63046163-63046572 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 146

Conread position: 4-419
Cow position: chr1:10005711-10005295 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 4-419
Cow position: chr1:14240789-14240367 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 229

Conread position: 4-419
Cow position: chr1:16838595-16839017 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 208

Conread position: 4-419
Cow position: chr1:28176034-28176453 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 83

Conread position: 4-419
Cow position: chr1:33548123-33547700 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 229

Conread position: 4-419
Cow position: chr1:56191140-56190719 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 63

Conread position: 4-419
Cow position: chr1:66971881-66971472 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 151

Conread position: 5-252
Cow position: chr1:61662258-61662006 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 108

Conread position: 5-395
Cow position: chr1:7162529-7162132 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 145

Conread position: 5-410
Cow position: chr1:33987546-33987116 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 147

Conread position: 5-417
Cow position: chr1:95474623-95474212 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 228

Conread position: 5-419
Cow position: chr1:51883888-51884301 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 145

Conread position: 6-226
Cow position: chr1:22529532-22529308 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 156

Conread position: 6-266
Cow position: chr1:30033558-30033812 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 66

Conread position: 6-298
Cow position: chr1:70388047-70387751 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 227

Conread position: 6-356
Cow position: chr1:86506065-86505717 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 29

Conread position: 6-417
Cow position: chr1:85338150-85338556 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 76

Conread position: 6-417
Cow position: chr1:90913109-90913526 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 227

Conread position: 6-419
Cow position: chr1:18024538-18024120 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 28

Conread position: 6-419
Cow position: chr1:69406438-69406858 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 144

Conread position: 8-270
Cow position: chr1:13438401-13438669 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 250

Conread position: 8-339
Cow position: chr1:37323991-37323663 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 49

Conread position: 8-370
Cow position: chr1:19145889-19145511 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 96

Conread position: 8-378
Cow position: chr1:29461610-29461985 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 256

Conread position: 8-408
Cow position: chr1:31351486-31351082 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 82

Conread position: 8-409
Cow position: chr1:85773488-85773895 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 90

Conread position: 8-410
Cow position: chr1:9261778-9262187 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 8-419
Cow position: chr1:55327955-55327545 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 225

Conread position: 8-423
Cow position: chr1:17033313-17032891 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 9-417
Cow position: chr1:12885578-12885176 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 110

Conread position: 12-228
Cow position: chr1:101524114-101523898 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 177

Conread position: 12-358
Cow position: chr1:74939023-74939361 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 65

Conread position: 12-410
Cow position: chr1:19056159-19056559 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 12-414
Cow position: chr1:89767242-89766837 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 23

Conread position: 12-419
Cow position: chr1:9377085-9376679 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 108

Conread position: 12-419
Cow position: chr1:20146701-20147123 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 131

Conread position: 12-419
Cow position: chr1:22730284-22729889 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 60

Conread position: 12-419
Cow position: chr1:23117920-23117509 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 32

Conread position: 12-422
Cow position: chr1:38545430-38545013 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 134

Conread position: 13-307
Cow position: chr1:55145332-55145648 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 13-404
Cow position: chr1:68950694-68951083 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 117

Conread position: 13-407
Cow position: chr1:98789141-98789530 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 20, 220

Conread position: 13-417
Cow position: chr1:20798107-20798519 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 13-417
Cow position: chr1:39480199-39479783 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 13-417
Cow position: chr1:68846423-68846027 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 70

Conread position: 13-419
Cow position: chr1:33392305-33392715 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 290

Conread position: 13-419
Cow position: chr1:44079131-44078723 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 14-128
Cow position: chr1:27494243-27494358 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 14-262
Cow position: chr1:99582171-99581914 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 222

Conread position: 14-358
Cow position: chr1:58528560-58528908 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 91

Conread position: 14-358
Cow position: chr1:88389611-88389935 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 101

Conread position: 14-419
Cow position: chr1:25088384-25087979 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 27

Conread position: 14-419
Cow position: chr1:30494852-30495254 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 131

Conread position: 14-424
Cow position: chr1:34858389-34857995 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 24

Conread position: 16-385
Cow position: chr1:74536416-74536042 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 12, 28

Conread position: 16-419
Cow position: chr1:61282712-61283119 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 130

Conread position: 17-408
Cow position: chr1:21132585-21132175 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 280

Conread position: 17-410
Cow position: chr1:31414935-31414536 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 8

Conread position: 17-417
Cow position: chr1:24562457-24562056 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 17-417
Cow position: chr1:24571844-24571441 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 17-419
Cow position: chr1:42554296-42554695 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 55

Conread position: 17-419
Cow position: chr1:57571123-57571532 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 216

Conread position: 17-419
Cow position: chr1:61746881-61746481 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 42

Conread position: 17-419
Cow position: chr1:99838060-99837647 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 216

Conread position: 18-313
Cow position: chr1:56475292-56475587 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 95

Conread position: 18-419
Cow position: chr1:47454688-47454281 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 215

Conread position: 19-382
Cow position: chr1:12468500-12468137 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 21-417
Cow position: chr1:70864547-70864941 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 26

Conread position: 22-419
Cow position: chr1:86705434-86705836 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 90

Conread position: 24-416
Cow position: chr1:60119463-60119862 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 126

Conread position: 25-351
Cow position: chr1:29915473-29915797 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 71

Conread position: 32-324
Cow position: chr1:99106110-99105830 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 126

Conread position: 32-370
Cow position: chr1:6765790-6765452 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 72

Conread position: 32-374
Cow position: chr1:15463160-15463504 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 44

Conread position: 32-404
Cow position: chr1:94464420-94464802 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 79

Conread position: 32-419
Cow position: chr1:97076194-97075803 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 200

Conread position: 34-356
Cow position: chr1:9438984-9438665 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 167

Conread position: 34-379
Cow position: chr1:76304330-76303995 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 27, 101

Conread position: 38-356
Cow position: chr1:18137121-18136808 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 78, 98

Conread position: 38-419
Cow position: chr1:95766067-95765686 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 195

Conread position: 40-419
Cow position: chr1:57635932-57636312 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 19

Conread position: 41-377
Cow position: chr1:24202831-24202492 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 241

Conread position: 44-329
Cow position: chr1:24922189-24921909 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 27

Conread position: 46-417
Cow position: chr1:70381090-70380715 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 59

Conread position: 47-313
Cow position: chr1:10364888-10365159 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-317
Cow position: chr1:32795523-32795798 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-356
Cow position: chr1:101974085-101973775 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 47-395
Cow position: chr1:34392539-34392184 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 103

Conread position: 47-409
Cow position: chr1:89234710-89234343 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-410
Cow position: chr1:3932318-3931949 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-410
Cow position: chr1:66369071-66368702 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-410
Cow position: chr1:85807293-85806941 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 101

Conread position: 47-419
Cow position: chr1:12057928-12057554 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 131

Conread position: 47-419
Cow position: chr1:88676788-88677168 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 188

Conread position: 48-341
Cow position: chr1:98797834-98797548 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 126, 55

Conread position: 49-308
Cow position: chr1:82163475-82163209 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 50-313
Cow position: chr1:92279486-92279232 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 130, 94

Conread position: 50-342
Cow position: chr1:68854280-68854571 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 92

Conread position: 51-227
Cow position: chr1:9525057-9524885 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 109, 30

Conread position: 51-327
Cow position: chr1:31515788-31515520 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 186

Conread position: 51-410
Cow position: chr1:3440289-3440653 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 76

Conread position: 51-410
Cow position: chr1:20849205-20848840 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 98

Conread position: 51-410
Cow position: chr1:52380770-52381135 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 98

Conread position: 51-413
Cow position: chr1:98989101-98988733 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 98

Conread position: 51-419
Cow position: chr1:71559424-71559050 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 98

Conread position: 51-421
Cow position: chr1:72114467-72114838 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 25

Conread position: 52-317
Cow position: chr1:19793030-19793296 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 52-417
Cow position: chr1:15332973-15333352 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 231, 67

Conread position: 53-419
Cow position: chr1:56644563-56644189 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 53-419
Cow position: chr1:102552331-102552684 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 110

Conread position: 56-419
Cow position: chr1:7746264-7746641 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 93

Conread position: 59-378
Cow position: chr1:57946264-57946591 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 59-410
Cow position: chr1:42079791-42080134 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 226
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 182, 76

Conread position: 59-417
Cow position: chr1:81320993-81320629 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 132

Conread position: 59-422
Cow position: chr1:51313446-51313087 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 91

Conread position: 60-172
Cow position: chr1:63517503-63517391 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 89

Conread position: 60-223
Cow position: chr1:21133796-21133632 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 85

Conread position: 60-228
Cow position: chr1:23658735-23658565 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 114, 0

Conread position: 60-417
Cow position: chr1:52508285-52507925 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 21

Conread position: 60-417
Cow position: chr1:87830585-87830939 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 51

Conread position: 60-419
Cow position: chr1:42056926-42057284 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 174

Conread position: 61-215
Cow position: chr1:80563240-80563398 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 90

Conread position: 61-379
Cow position: chr1:40061559-40061867 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 14

Conread position: 61-387
Cow position: chr1:38400958-38401271 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 124, 66

Conread position: 61-387
Cow position: chr1:39141212-39140884 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 110, 10

Conread position: 61-388
Cow position: chr1:44963149-44962824 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 129, 14

Conread position: 61-396
Cow position: chr1:4208163-4207822 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 88

Conread position: 61-417
Cow position: chr1:68252665-68253027 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 88

Conread position: 61-417
Cow position: chr1:98559249-98559610 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 171

Conread position: 61-419
Cow position: chr1:71667146-71666774 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 61-419
Cow position: chr1:73018133-73017771 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 20

Conread position: 63-410
Cow position: chr1:46930616-46930263 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 86

Conread position: 65-407
Cow position: chr1:20001659-20001320 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 16

Conread position: 66-224
Cow position: chr1:51982788-51982949 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 90, 0

Conread position: 66-398
Cow position: chr1:81665152-81664832 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 90, 80

Conread position: 66-417
Cow position: chr1:56619607-56619248 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 83

Conread position: 67-228
Cow position: chr1:22727643-22727806 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 130

Conread position: 67-419
Cow position: chr1:57743895-57743539 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 81, 92

Conread position: 68-231
Cow position: chr1:13638557-13638393 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 109, 126

Conread position: 68-417
Cow position: chr1:31317133-31316787 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 126

Conread position: 69-419
Cow position: chr1:29606704-29606343 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 301

Conread position: 70-419
Cow position: chr1:41736529-41736170 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 71-356
Cow position: chr1:22288346-22288616 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 109, 161

Conread position: 71-408
Cow position: chr1:73434158-73433809 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 78

Conread position: 71-409
Cow position: chr1:58197108-58196764 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 161

Conread position: 71-416
Cow position: chr1:31756022-31756367 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 228
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 94, 31

Conread position: 71-417
Cow position: chr1:23057622-23057971 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 40

Conread position: 71-419
Cow position: chr1:42054229-42053884 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 78

Conread position: 72-418
Cow position: chr1:70069064-70068712 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 77

Conread position: 72-419
Cow position: chr1:99628730-99628383 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 103

Conread position: 72-421
Cow position: chr1:92523020-92522666 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 21

Conread position: 73-370
Cow position: chr1:8845004-8845306 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 76

Conread position: 75-419
Cow position: chr1:7196704-7197040 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 74

Conread position: 76-219
Cow position: chr1:44137473-44137328 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 70

Conread position: 76-398
Cow position: chr1:79296156-79296484 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 233

Conread position: 76-410
Cow position: chr1:21080089-21079749 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 73

Conread position: 76-423
Cow position: chr1:66242710-66242361 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 70

Conread position: 77-417
Cow position: chr1:29901875-29901557 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 36

Conread position: 78-270
Cow position: chr1:78796720-78796525 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 138

Conread position: 78-349
Cow position: chr1:55203557-55203279 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 95, 77

Conread position: 78-414
Cow position: chr1:31238835-31238489 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 15

Conread position: 81-419
Cow position: chr1:15743176-15743517 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 175

Conread position: 81-428
Cow position: chr1:32361040-32360695 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 141

Conread position: 82-410
Cow position: chr1:72807936-72808270 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 67

Conread position: 86-299
Cow position: chr1:55019030-55019242 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 138

Conread position: 86-370
Cow position: chr1:69872830-69873122 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 66

Conread position: 86-410
Cow position: chr1:17436040-17435711 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 63

Conread position: 86-419
Cow position: chr1:76700383-76700041 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 155, 144

Conread position: 90-417
Cow position: chr1:77461503-77461828 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 31

Conread position: 93-419
Cow position: chr1:67189061-67188725 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 56

Conread position: 94-410
Cow position: chr1:39889447-39889767 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 138

Conread position: 95-419
Cow position: chr1:74302742-74302417 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 137

Conread position: 96-409
Cow position: chr1:81362651-81362963 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 120

Conread position: 97-410
Cow position: chr1:3969910-3969595 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 52

Conread position: 98-379
Cow position: chr1:88337815-88338099 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 135

Conread position: 98-419
Cow position: chr1:38478984-38479311 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 134

Conread position: 102-412
Cow position: chr1:4563911-4563594 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 51, 311

Conread position: 103-419
Cow position: chr1:44837140-44836817 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 129

Conread position: 104-409
Cow position: chr1:68783535-68783223 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 74, 104

Conread position: 106-414
Cow position: chr1:92433171-92433460 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 266, 68

Conread position: 107-409
Cow position: chr1:48036428-48036120 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 107-410
Cow position: chr1:1027756-1028058 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 107-410
Cow position: chr1:21421277-21420967 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 107-410
Cow position: chr1:71124257-71123948 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 107-413
Cow position: chr1:35785157-35785472 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 291

Conread position: 107-418
Cow position: chr1:58195706-58195401 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 114

Conread position: 107-419
Cow position: chr1:64972801-64973106 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 41

Conread position: 108-407
Cow position: chr1:52941388-52941693 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 41

Conread position: 111-356
Cow position: chr1:15049195-15049435 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 69, 121

Conread position: 111-410
Cow position: chr1:30311815-30312120 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 38

Conread position: 112-395
Cow position: chr1:102290466-102290177 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 42

Conread position: 113-316
Cow position: chr1:99791805-99792020 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 14

Conread position: 114-311
Cow position: chr1:95994443-95994636 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 121

Conread position: 114-410
Cow position: chr1:18962359-18962057 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 35

Conread position: 116-419
Cow position: chr1:69963914-69963610 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 116

Conread position: 117-419
Cow position: chr1:27494633-27494937 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 37

Conread position: 123-379
Cow position: chr1:75895966-75895709 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 32

Conread position: 123-410
Cow position: chr1:8745099-8744806 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 123-419
Cow position: chr1:28413431-28413140 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 124-356
Cow position: chr1:100435709-100435943 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 109

Conread position: 124-419
Cow position: chr1:88297619-88297909 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 108

Conread position: 125-360
Cow position: chr1:58779807-58780037 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 105, 48

Conread position: 125-410
Cow position: chr1:33364411-33364702 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 125-410
Cow position: chr1:33656244-33656535 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 126-376
Cow position: chr1:85163916-85163659 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 143

Conread position: 128-419
Cow position: chr1:44229618-44229915 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 104

Conread position: 129-417
Cow position: chr1:81356890-81356596 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 101

Conread position: 132-408
Cow position: chr1:86574234-86574516 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 100

Conread position: 133-408
Cow position: chr1:33040226-33040507 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 16

Conread position: 134-419
Cow position: chr1:72036036-72035750 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 94

Conread position: 135-383
Cow position: chr1:25548444-25548696 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 132

Conread position: 136-378
Cow position: chr1:39701914-39702159 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 38, 96

Conread position: 136-419
Cow position: chr1:40310170-40310456 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 120

Conread position: 136-419
Cow position: chr1:102010870-102010578 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 139-410
Cow position: chr1:68481272-68480996 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 139-419
Cow position: chr1:23371146-23370864 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 111

Conread position: 141-419
Cow position: chr1:86511315-86511602 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 17

Conread position: 146-417
Cow position: chr1:72306932-72306660 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 17

Conread position: 148-419
Cow position: chr1:40603452-40603724 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 84

Conread position: 151-421
Cow position: chr1:2600273-2600002 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 79

Conread position: 158-419
Cow position: chr1:80974796-80974531 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 164

Conread position: 159-409
Cow position: chr1:97205788-97206045 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 159-410
Cow position: chr1:10936717-10936974 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 72

Conread position: 160-394
Cow position: chr1:40700299-40700534 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 71

Conread position: 160-419
Cow position: chr1:22616470-22616212 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 33

Conread position: 161-301
Cow position: chr1:11728175-11728318 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 70

Conread position: 161-374
Cow position: chr1:53494643-53494857 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 55

Conread position: 161-394
Cow position: chr1:60033476-60033245 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 211, 69

Conread position: 162-419
Cow position: chr1:60554899-60554636 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 165-417
Cow position: chr1:19517998-19517735 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 67

Conread position: 170-410
Cow position: chr1:43225541-43225298 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 7

Conread position: 170-410
Cow position: chr1:61281456-61281701 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 176-323
Cow position: chr1:50374078-50374228 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 176-378
Cow position: chr1:96390828-96390630 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 88

Conread position: 176-409
Cow position: chr1:38687678-38687911 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 176-419
Cow position: chr1:72285112-72284862 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 177-410
Cow position: chr1:26585675-26585912 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 177-419
Cow position: chr1:76020488-76020241 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 54

Conread position: 178-390
Cow position: chr1:21459570-21459779 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 134

Conread position: 179-410
Cow position: chr1:26531725-26531962 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 51

Conread position: 179-419
Cow position: chr1:97482433-97482207 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 192, 51

Conread position: 180-419
Cow position: chr1:44991516-44991276 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 85

Conread position: 184-419
Cow position: chr1:31190904-31190659 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 187-417
Cow position: chr1:72069622-72069388 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 187-419
Cow position: chr1:37660945-37661180 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 198

Conread position: 189-408
Cow position: chr1:8514741-8514951 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 125

Conread position: 189-419
Cow position: chr1:92009074-92009306 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 40

Conread position: 195-419
Cow position: chr1:57391135-57390921 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 35

Conread position: 196-421
Cow position: chr1:53368650-53368883 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 201-419
Cow position: chr1:9783713-9783932 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 47

Show alignments to all cow chromosomes.