Cow genome map

Conread name: Emb1-C0005188_H20

Conread position: 1-228
Cow position: chr26:1915607-1915836 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 32, 198

Conread position: 1-315
Cow position: chr26:2604660-2604339 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 38

Conread position: 1-377
Cow position: chr26:7307254-7307633 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 51

Conread position: 1-410
Cow position: chr26:22691657-22692068 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 134

Conread position: 1-413
Cow position: chr26:14173330-14173744 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 299

Conread position: 1-414
Cow position: chr26:20218520-20218930 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 1-417
Cow position: chr26:12126286-12125886 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 1-419
Cow position: chr26:17327429-17327855 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 274

Conread position: 2-196
Cow position: chr26:3199639-3199836 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 148

Conread position: 2-208
Cow position: chr26:3157383-3157592 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 148

Conread position: 2-216
Cow position: chr26:46382-46165 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 136

Conread position: 2-228
Cow position: chr26:16781442-16781672 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 2-229
Cow position: chr26:20186590-20186799 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 31, 70

Conread position: 2-260
Cow position: chr26:17182351-17182591 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 178, 24

Conread position: 2-301
Cow position: chr26:10490512-10490812 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 37

Conread position: 2-341
Cow position: chr26:17393627-17393287 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 2-356
Cow position: chr26:34015111-34015466 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 45

Conread position: 2-358
Cow position: chr26:2201798-2202158 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 81

Conread position: 2-364
Cow position: chr26:35191280-35190912 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-385
Cow position: chr26:3833302-3833692 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-386
Cow position: chr26:18804102-18803710 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 253

Conread position: 2-397
Cow position: chr26:17288078-17288478 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 145

Conread position: 2-400
Cow position: chr26:17429207-17428802 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-408
Cow position: chr26:34552831-34552430 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 266
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 64

Conread position: 2-409
Cow position: chr26:23889680-23890085 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 152

Conread position: 2-409
Cow position: chr26:34030829-34031228 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 272
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 157, 69

Conread position: 2-410
Cow position: chr26:386948-387361 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 252

Conread position: 2-410
Cow position: chr26:1343027-1342612 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:3027171-3026757 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 110

Conread position: 2-410
Cow position: chr26:3564771-3564359 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 380

Conread position: 2-410
Cow position: chr26:4440496-4440088 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 83

Conread position: 2-410
Cow position: chr26:4729056-4728646 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 116

Conread position: 2-410
Cow position: chr26:7459696-7459284 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 93

Conread position: 2-410
Cow position: chr26:7559348-7558935 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 351

Conread position: 2-410
Cow position: chr26:8084094-8084509 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:8739149-8738734 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:8885112-8885525 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 10

Conread position: 2-410
Cow position: chr26:9115307-9115721 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:13183578-13183993 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:13806759-13806346 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 2-410
Cow position: chr26:20019369-20019776 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:26286127-26286542 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 149

Conread position: 2-410
Cow position: chr26:26611724-26612139 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:28706790-28706380 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 2-410
Cow position: chr26:30594361-30593957 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:34265232-34265647 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:35121974-35121560 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr26:35560793-35560380 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-417
Cow position: chr26:8308496-8308064 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 52

Conread position: 2-417
Cow position: chr26:10699230-10698825 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 46

Conread position: 2-417
Cow position: chr26:25393054-25393475 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 233

Conread position: 2-418
Cow position: chr26:8873114-8873536 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 118

Conread position: 2-419
Cow position: chr26:1620923-1621339 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 88

Conread position: 2-419
Cow position: chr26:3187027-3187442 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 33

Conread position: 2-419
Cow position: chr26:3755288-3755690 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 278
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 111

Conread position: 2-419
Cow position: chr26:4324446-4324027 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 144

Conread position: 2-419
Cow position: chr26:5679798-5680231 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 339

Conread position: 2-419
Cow position: chr26:6429853-6430258 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 147

Conread position: 2-419
Cow position: chr26:6843952-6843530 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 231

Conread position: 2-419
Cow position: chr26:9100712-9100300 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 65

Conread position: 2-419
Cow position: chr26:9558612-9558178 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 241

Conread position: 2-419
Cow position: chr26:9694528-9694106 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 205

Conread position: 2-419
Cow position: chr26:14487989-14487573 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 85

Conread position: 2-419
Cow position: chr26:15199296-15199701 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 2-419
Cow position: chr26:20496804-20497232 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 59

Conread position: 2-419
Cow position: chr26:22831768-22831347 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 2-419
Cow position: chr26:23590963-23591387 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 231

Conread position: 2-419
Cow position: chr26:29433500-29433924 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-419
Cow position: chr26:35423767-35424189 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 46

Conread position: 2-422
Cow position: chr26:24238969-24239390 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 70

Conread position: 2-426
Cow position: chr26:12662464-12662050 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 3-228
Cow position: chr26:2670548-2670323 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 30, 69

Conread position: 3-397
Cow position: chr26:26281056-26281446 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 247
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 16

Conread position: 3-419
Cow position: chr26:30725649-30725217 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 231

Conread position: 4-410
Cow position: chr26:1346724-1346311 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 146

Conread position: 4-410
Cow position: chr26:9069832-9070245 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 146

Conread position: 4-419
Cow position: chr26:13773321-13773735 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 304

Conread position: 5-356
Cow position: chr26:1885284-1885645 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 102

Conread position: 5-419
Cow position: chr26:12585267-12584846 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 145

Conread position: 6-192
Cow position: chr26:18800891-18800703 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 102

Conread position: 8-410
Cow position: chr26:30786201-30786610 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 12-407
Cow position: chr26:15145772-15146174 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 12-419
Cow position: chr26:20255902-20256310 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 145

Conread position: 13-322
Cow position: chr26:30753060-30752745 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 137

Conread position: 13-387
Cow position: chr26:18877085-18877465 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 116

Conread position: 14-410
Cow position: chr26:21858875-21859265 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 52

Conread position: 18-419
Cow position: chr26:21350781-21351162 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 15, 217

Conread position: 18-419
Cow position: chr26:30586071-30585668 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 54

Conread position: 19-410
Cow position: chr26:7677019-7677417 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 131

Conread position: 19-419
Cow position: chr26:6476392-6475983 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 131

Conread position: 21-409
Cow position: chr26:11297116-11296722 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 129

Conread position: 22-419
Cow position: chr26:6038406-6037988 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 23-417
Cow position: chr26:11362392-11362010 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 65

Conread position: 32-196
Cow position: chr26:6870696-6870861 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 128, 15

Conread position: 32-356
Cow position: chr26:9835770-9836099 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 117

Conread position: 35-428
Cow position: chr26:8810159-8810556 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 159

Conread position: 38-357
Cow position: chr26:16905227-16905549 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 107, 19

Conread position: 41-414
Cow position: chr26:6030684-6030316 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 185

Conread position: 46-410
Cow position: chr26:18928588-18928958 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 103

Conread position: 47-410
Cow position: chr26:11537139-11537508 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 48-227
Cow position: chr26:614876-614700 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 132, 33

Conread position: 48-320
Cow position: chr26:581450-581173 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 101

Conread position: 50-217
Cow position: chr26:624895-624731 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 45

Conread position: 51-419
Cow position: chr26:3097331-3096957 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 52-299
Cow position: chr26:20299671-20299442 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 122, 19

Conread position: 53-410
Cow position: chr26:16864594-16864958 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 96

Conread position: 54-414
Cow position: chr26:8352062-8352411 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 46

Conread position: 61-229
Cow position: chr26:783927-783756 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 96

Conread position: 61-417
Cow position: chr26:12965526-12965188 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 84

Conread position: 62-410
Cow position: chr26:9838113-9837756 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 116, 13

Conread position: 65-414
Cow position: chr26:6098232-6097883 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 167

Conread position: 66-226
Cow position: chr26:12652576-12652417 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 112, 16

Conread position: 68-385
Cow position: chr26:16719809-16720135 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 71-302
Cow position: chr26:21823267-21823034 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 100, 161

Conread position: 71-398
Cow position: chr26:19536402-19536720 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 106, 18

Conread position: 71-410
Cow position: chr26:19792060-19791727 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 31, 22

Conread position: 76-418
Cow position: chr26:15558829-15559177 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 103

Conread position: 76-419
Cow position: chr26:13976762-13976429 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 124, 17

Conread position: 79-413
Cow position: chr26:3756550-3756903 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 81-414
Cow position: chr26:6836967-6837295 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 152

Conread position: 82-398
Cow position: chr26:7479689-7479364 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 212
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 82-418
Cow position: chr26:14396131-14395788 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 82-419
Cow position: chr26:21538743-21539085 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 7

Conread position: 84-419
Cow position: chr26:14897439-14897780 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 148

Conread position: 86-413
Cow position: chr26:2197775-2197439 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 179

Conread position: 90-354
Cow position: chr26:887478-887746 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 28

Conread position: 95-305
Cow position: chr26:18933980-18933768 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 26

Conread position: 97-421
Cow position: chr26:3705930-3706256 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 135

Conread position: 99-419
Cow position: chr26:7506711-7507027 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 66

Conread position: 101-425
Cow position: chr26:22659896-22659592 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 21

Conread position: 104-410
Cow position: chr26:2348336-2348029 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 105-419
Cow position: chr26:17538325-17538640 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 17

Conread position: 107-419
Cow position: chr26:756000-755684 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 193

Conread position: 107-419
Cow position: chr26:799170-798854 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 71, 195

Conread position: 108-350
Cow position: chr26:30652998-30652746 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 72, 167

Conread position: 109-417
Cow position: chr26:23600653-23600345 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 45

Conread position: 113-410
Cow position: chr26:1637035-1636731 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 44

Conread position: 113-419
Cow position: chr26:13556830-13556524 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 70

Conread position: 119-316
Cow position: chr26:9867958-9867753 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 74

Conread position: 128-356
Cow position: chr26:11902741-11902970 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 47

Conread position: 128-410
Cow position: chr26:5430417-5430129 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 128-417
Cow position: chr26:1673174-1673466 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 103

Conread position: 129-410
Cow position: chr26:2486899-2487186 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 20

Conread position: 129-419
Cow position: chr26:14292027-14292328 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 48, 25

Conread position: 149-410
Cow position: chr26:33253070-33252804 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 149-414
Cow position: chr26:16602839-16602581 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 9

Conread position: 154-313
Cow position: chr26:23272018-23272183 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 156-311
Cow position: chr26:4599779-4599620 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 159-410
Cow position: chr26:4728653-4728398 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 170

Conread position: 160-410
Cow position: chr26:18383982-18383735 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 75

Conread position: 164-414
Cow position: chr26:30569700-30569440 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 176-415
Cow position: chr26:18918876-18918631 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 150, 54

Conread position: 176-419
Cow position: chr26:31793981-31794228 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 210

Conread position: 179-419
Cow position: chr26:19347980-19347734 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 189-410
Cow position: chr26:12870873-12871099 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 53, 41

Conread position: 194-419
Cow position: chr26:1340833-1341068 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 36

Show alignments to all cow chromosomes.