Cow genome map

Conread name: Emb1-C0005188_H20

Conread position: 1-282
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 10

Conread position: 1-410
Cow position:
Alignm length: 421
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 149

Conread position: 1-419
Cow position:
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 232

Conread position: 1-419
Cow position:
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 232

Conread position: 2-185
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 100

Conread position: 2-196
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 148

Conread position: 2-228
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-228
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 31, 112

Conread position: 2-265
Cow position:
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 153

Conread position: 2-294
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 31, 114

Conread position: 2-306
Cow position:
Alignm length: 307
Alignm identity: 202
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 229, 30

Conread position: 2-346
Cow position:
Alignm length: 351
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 266

Conread position: 2-346
Cow position:
Alignm length: 351
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 110

Conread position: 2-370
Cow position:
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 42

Conread position: 2-383
Cow position:
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 85

Conread position: 2-386
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 2-390
Cow position:
Alignm length: 398
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 103

Conread position: 2-398
Cow position:
Alignm length: 404
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 45

Conread position: 2-402
Cow position:
Alignm length: 408
Alignm identity: 267
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 32, 148

Conread position: 2-408
Cow position:
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-410
Cow position:
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 2-410
Cow position:
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position:
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 33

Conread position: 2-410
Cow position:
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position:
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position:
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position:
Alignm length: 418
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position:
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 2-410
Cow position:
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 45

Conread position: 2-414
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 2-414
Cow position:
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 304

Conread position: 2-414
Cow position:
Alignm length: 424
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 2-417
Cow position:
Alignm length: 423
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-417
Cow position:
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 153

Conread position: 2-419
Cow position:
Alignm length: 422
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 116

Conread position: 2-419
Cow position:
Alignm length: 424
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 85

Conread position: 2-419
Cow position:
Alignm length: 426
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 156

Conread position: 2-419
Cow position:
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 181

Conread position: 2-419
Cow position:
Alignm length: 433
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 110

Conread position: 2-419
Cow position:
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 262

Conread position: 2-419
Cow position:
Alignm length: 426
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 70

Conread position: 2-419
Cow position:
Alignm length: 422
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 43

Conread position: 2-419
Cow position:
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-419
Cow position:
Alignm length: 426
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position:
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position:
Alignm length: 424
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 230

Conread position: 2-419
Cow position:
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 27

Conread position: 2-419
Cow position:
Alignm length: 435
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 240

Conread position: 2-419
Cow position:
Alignm length: 425
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 2-419
Cow position:
Alignm length: 425
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 396

Conread position: 2-419
Cow position:
Alignm length: 430
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 235

Conread position: 2-419
Cow position:
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 2-419
Cow position:
Alignm length: 436
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 145

Conread position: 2-421
Cow position:
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-421
Cow position:
Alignm length: 427
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 319

Conread position: 2-421
Cow position:
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 44

Conread position: 2-422
Cow position:
Alignm length: 429
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-423
Cow position:
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 235

Conread position: 3-419
Cow position:
Alignm length: 422
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 64

Conread position: 4-223
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 68

Conread position: 4-227
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 146

Conread position: 4-354
Cow position:
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 4-378
Cow position:
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 4-417
Cow position:
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 68

Conread position: 5-419
Cow position:
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 59

Conread position: 6-354
Cow position:
Alignm length: 353
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 178

Conread position: 6-364
Cow position:
Alignm length: 367
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 6-416
Cow position:
Alignm length: 416
Alignm identity: 269
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 20, 12

Conread position: 6-419
Cow position:
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 162

Conread position: 6-419
Cow position:
Alignm length: 420
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 60

Conread position: 7-224
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 164, 31

Conread position: 8-419
Cow position:
Alignm length: 418
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 142

Conread position: 9-419
Cow position:
Alignm length: 419
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 63

Conread position: 10-275
Cow position:
Alignm length: 272
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 195, 21

Conread position: 12-410
Cow position:
Alignm length: 407
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 12-419
Cow position:
Alignm length: 416
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 12-419
Cow position:
Alignm length: 425
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 221

Conread position: 12-419
Cow position:
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 242

Conread position: 13-273
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 91

Conread position: 13-419
Cow position:
Alignm length: 419
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 13-419
Cow position:
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 38

Conread position: 14-419
Cow position:
Alignm length: 418
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 269

Conread position: 16-419
Cow position:
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 217

Conread position: 17-226
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 16, 55

Conread position: 17-419
Cow position:
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 282

Conread position: 17-419
Cow position:
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 18

Conread position: 44-301
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 134, 42

Conread position: 44-417
Cow position:
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 103

Conread position: 48-410
Cow position:
Alignm length: 370
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 205

Conread position: 49-410
Cow position:
Alignm length: 378
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 11

Conread position: 54-228
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 60-230
Cow position:
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 89

Conread position: 61-419
Cow position:
Alignm length: 366
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 115

Conread position: 65-315
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 21

Conread position: 66-370
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 55

Conread position: 66-410
Cow position:
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 83

Conread position: 71-370
Cow position:
Alignm length: 304
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 42

Conread position: 71-396
Cow position:
Alignm length: 336
Alignm identity: 220
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 106, 156

Conread position: 71-415
Cow position:
Alignm length: 359
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 22

Conread position: 71-418
Cow position:
Alignm length: 356
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 103, 161

Conread position: 71-419
Cow position:
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 220

Conread position: 71-419
Cow position:
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 28

Conread position: 74-390
Cow position:
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 110

Conread position: 78-428
Cow position:
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 33

Conread position: 84-419
Cow position:
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 35

Conread position: 85-410
Cow position:
Alignm length: 334
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 64

Conread position: 95-414
Cow position:
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 97-417
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 144, 80

Conread position: 97-419
Cow position:
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 155

Conread position: 102-360
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 47

Conread position: 107-419
Cow position:
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 120

Conread position: 113-409
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 19

Conread position: 117-419
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 32

Conread position: 118-419
Cow position:
Alignm length: 306
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 43, 27

Conread position: 129-425
Cow position:
Alignm length: 300
Alignm identity: 213
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 51, 18

Conread position: 130-419
Cow position:
Alignm length: 294
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 155

Conread position: 130-422
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 102

Conread position: 131-417
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 99

Conread position: 137-399
Cow position:
Alignm length: 268
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 48

Conread position: 149-410
Cow position:
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 83

Conread position: 149-422
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 93, 7

Conread position: 159-355
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 159-410
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 72

Conread position: 159-410
Cow position:
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 162-356
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 70

Conread position: 165-356
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 101

Conread position: 176-417
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 132

Conread position: 176-419
Cow position:
Alignm length: 249
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 54

Conread position: 176-419
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 172

Conread position: 187-364
Cow position:
Alignm length: 181
Alignm identity: 143
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 188-414
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 132

Conread position: 188-419
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 115

Conread position: 192-419
Cow position:
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 38

Conread position: 195-410
Cow position:
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 35

Conread position: 198-421
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Show alignments to all cow chromosomes.