Cow genome map

Conread name: Emb1-C0005188_H20

Conread position: 1-216
Cow position: chr6:7176368-7176153 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 16

Conread position: 1-226
Cow position: chr6:44097904-44098130 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 112

Conread position: 1-228
Cow position: chr6:15924398-15924168 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 86

Conread position: 1-283
Cow position: chr6:54887394-54887108 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 1-285
Cow position: chr6:4903799-4903514 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 32, 80

Conread position: 1-341
Cow position: chr6:5096608-5096272 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 82

Conread position: 1-342
Cow position: chr6:25790504-25790173 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 126

Conread position: 1-356
Cow position: chr6:65819385-65819024 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 1-365
Cow position: chr6:39999262-39998893 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 279

Conread position: 1-404
Cow position: chr6:12352040-12352446 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 31

Conread position: 1-404
Cow position: chr6:17344395-17344806 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-410
Cow position: chr6:40251602-40251190 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 149

Conread position: 1-414
Cow position: chr6:59596438-59596872 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-417
Cow position: chr6:24242484-24242906 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 232

Conread position: 1-417
Cow position: chr6:58030974-58031391 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 323

Conread position: 1-418
Cow position: chr6:21832464-21832041 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 306

Conread position: 1-419
Cow position: chr6:706195-706617 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 381

Conread position: 1-419
Cow position: chr6:7215992-7216407 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 232

Conread position: 1-419
Cow position: chr6:11869737-11869313 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 156

Conread position: 1-419
Cow position: chr6:16410253-16410676 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 54

Conread position: 1-419
Cow position: chr6:32420147-32420562 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 75

Conread position: 1-419
Cow position: chr6:35873532-35873113 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 1-419
Cow position: chr6:39110158-39109749 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 274
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 49

Conread position: 1-419
Cow position: chr6:39331336-39330910 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 232

Conread position: 1-419
Cow position: chr6:51733278-51733703 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 232

Conread position: 1-419
Cow position: chr6:55903286-55903711 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 232

Conread position: 1-422
Cow position: chr6:43797704-43797273 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 235

Conread position: 2-142
Cow position: chr6:58016547-58016688 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 2-142
Cow position: chr6:65860574-65860713 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 16

Conread position: 2-167
Cow position: chr6:25357663-25357503 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 65

Conread position: 2-169
Cow position: chr6:27151243-27151075 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 148

Conread position: 2-172
Cow position: chr6:43038873-43038702 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 148

Conread position: 2-172
Cow position: chr6:68030377-68030548 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 148

Conread position: 2-192
Cow position: chr6:30269705-30269511 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 2-217
Cow position: chr6:59619274-59619493 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 2-226
Cow position: chr6:43620929-43621156 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 34, 148

Conread position: 2-227
Cow position: chr6:6034599-6034373 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 75

Conread position: 2-227
Cow position: chr6:6557159-6557387 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 148

Conread position: 2-227
Cow position: chr6:36230328-36230100 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 148

Conread position: 2-227
Cow position: chr6:61829427-61829655 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 148

Conread position: 2-227
Cow position: chr6:67448728-67448500 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 148

Conread position: 2-228
Cow position: chr6:1109205-1109435 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-228
Cow position: chr6:6944744-6944520 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 17

Conread position: 2-228
Cow position: chr6:13314832-13314603 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 55

Conread position: 2-228
Cow position: chr6:16766642-16766415 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 2-228
Cow position: chr6:17556472-17556246 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 2-228
Cow position: chr6:27526765-27526539 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 176

Conread position: 2-228
Cow position: chr6:45736665-45736441 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 169, 25

Conread position: 2-228
Cow position: chr6:52065923-52065694 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 34, 148

Conread position: 2-229
Cow position: chr6:67173753-67173984 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 92

Conread position: 2-234
Cow position: chr6:34843515-34843281 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 230

Conread position: 2-265
Cow position: chr6:47149774-47149504 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 49

Conread position: 2-270
Cow position: chr6:653599-653326 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 34, 148

Conread position: 2-270
Cow position: chr6:32664904-32664629 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 146

Conread position: 2-302
Cow position: chr6:2618368-2618061 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 199

Conread position: 2-322
Cow position: chr6:20268114-20267793 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 2-333
Cow position: chr6:43187307-43187644 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-337
Cow position: chr6:55593268-55593609 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-339
Cow position: chr6:16703545-16703218 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 152

Conread position: 2-341
Cow position: chr6:917241-917597 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 246

Conread position: 2-341
Cow position: chr6:27939232-27939573 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 148

Conread position: 2-342
Cow position: chr6:23568395-23568049 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-349
Cow position: chr6:31941065-31941418 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-351
Cow position: chr6:35600877-35601230 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 81

Conread position: 2-356
Cow position: chr6:40863831-40863478 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 21

Conread position: 2-356
Cow position: chr6:56925931-56926291 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 255

Conread position: 2-356
Cow position: chr6:60332541-60332903 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-356
Cow position: chr6:64719516-64719873 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 133

Conread position: 2-360
Cow position: chr6:43778902-43779252 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 25

Conread position: 2-365
Cow position: chr6:41231686-41232049 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 128

Conread position: 2-370
Cow position: chr6:8634107-8633767 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 31, 55

Conread position: 2-390
Cow position: chr6:56451897-56451511 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-398
Cow position: chr6:2089474-2089870 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 2-408
Cow position: chr6:27173027-27173452 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 160

Conread position: 2-408
Cow position: chr6:50526707-50527122 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 39

Conread position: 2-409
Cow position: chr6:12388256-12387863 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 2-409
Cow position: chr6:14928657-14929059 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 103

Conread position: 2-409
Cow position: chr6:26667826-26667413 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-409
Cow position: chr6:46283900-46283493 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 197

Conread position: 2-409
Cow position: chr6:55238888-55239302 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-409
Cow position: chr6:57856968-57857382 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 230

Conread position: 2-410
Cow position: chr6:126934-126522 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 81

Conread position: 2-410
Cow position: chr6:452065-451651 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:888755-889168 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:1796825-1797238 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 2-410
Cow position: chr6:3987858-3987443 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:4274268-4274658 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 75

Conread position: 2-410
Cow position: chr6:6569033-6568621 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:7138143-7137729 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 46

Conread position: 2-410
Cow position: chr6:7448693-7449108 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-410
Cow position: chr6:9234709-9235125 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:10044413-10044819 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:11019855-11020271 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 149

Conread position: 2-410
Cow position: chr6:11389416-11389001 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:11401518-11401933 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:11453670-11453254 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 149

Conread position: 2-410
Cow position: chr6:12997619-12998029 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 87

Conread position: 2-410
Cow position: chr6:16418484-16418078 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 2-410
Cow position: chr6:17386721-17387136 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:18912536-18912122 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:19103710-19103295 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:20581578-20581166 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:21163501-21163916 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:21711904-21712319 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 2-410
Cow position: chr6:22043810-22043397 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 2-410
Cow position: chr6:22737508-22737093 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:25374910-25374495 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:26771923-26771509 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 80

Conread position: 2-410
Cow position: chr6:28001198-28000783 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:28065189-28065602 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 2-410
Cow position: chr6:33809236-33808821 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:44146749-44146338 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:45479890-45479475 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:45901794-45901380 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-410
Cow position: chr6:45975697-45976112 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:46225764-46225352 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:46764204-46763793 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 33

Conread position: 2-410
Cow position: chr6:48881945-48882356 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:51150140-51150555 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 142

Conread position: 2-410
Cow position: chr6:55361597-55361182 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:57521373-57521788 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:62664973-62665388 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:63177241-63177656 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-410
Cow position: chr6:67553430-67553845 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 2-413
Cow position: chr6:27887110-27887538 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 156

Conread position: 2-414
Cow position: chr6:45666730-45666320 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 42

Conread position: 2-416
Cow position: chr6:29689056-29689474 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 37

Conread position: 2-417
Cow position: chr6:9322201-9322612 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 2-417
Cow position: chr6:9839938-9839509 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 2-417
Cow position: chr6:11193389-11192960 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 2-417
Cow position: chr6:14897378-14897802 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 76

Conread position: 2-417
Cow position: chr6:19044413-19044809 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 11

Conread position: 2-417
Cow position: chr6:29085177-29084770 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 11

Conread position: 2-417
Cow position: chr6:65909522-65909945 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 25

Conread position: 2-419
Cow position: chr6:224307-223877 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 81

Conread position: 2-419
Cow position: chr6:478748-479168 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 230

Conread position: 2-419
Cow position: chr6:1263360-1263781 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 103

Conread position: 2-419
Cow position: chr6:1834193-1834617 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-419
Cow position: chr6:2111201-2110793 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 80

Conread position: 2-419
Cow position: chr6:3272284-3271859 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:3485221-3484798 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:5946577-5946153 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:6182510-6182105 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 25

Conread position: 2-419
Cow position: chr6:7467452-7467029 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 110

Conread position: 2-419
Cow position: chr6:8754258-8753836 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 232

Conread position: 2-419
Cow position: chr6:11289268-11288846 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 230

Conread position: 2-419
Cow position: chr6:11722010-11721594 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:12663117-12662707 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 146

Conread position: 2-419
Cow position: chr6:12926771-12927190 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 89

Conread position: 2-419
Cow position: chr6:13308198-13307776 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 36

Conread position: 2-419
Cow position: chr6:14851549-14851136 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 84

Conread position: 2-419
Cow position: chr6:14950454-14950035 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 116

Conread position: 2-419
Cow position: chr6:15137975-15137551 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:15276042-15275618 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:16593148-16593570 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 132

Conread position: 2-419
Cow position: chr6:16624974-16625413 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 2-419
Cow position: chr6:17049571-17049996 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:17111967-17111544 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 116

Conread position: 2-419
Cow position: chr6:17121584-17122011 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 121

Conread position: 2-419
Cow position: chr6:20553043-20552619 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 2-419
Cow position: chr6:28135950-28136360 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 112

Conread position: 2-419
Cow position: chr6:28160607-28161031 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-419
Cow position: chr6:33300863-33301291 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 234

Conread position: 2-419
Cow position: chr6:33949963-33949542 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 160

Conread position: 2-419
Cow position: chr6:34493873-34494294 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:34504323-34503902 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:36531472-36531897 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-419
Cow position: chr6:39912520-39912944 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-419
Cow position: chr6:40550502-40550079 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:40813563-40813983 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 105

Conread position: 2-419
Cow position: chr6:42266931-42267338 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 49

Conread position: 2-419
Cow position: chr6:44017630-44017206 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:46633317-46633733 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 2-419
Cow position: chr6:47040011-47039589 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 152

Conread position: 2-419
Cow position: chr6:47171265-47171666 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 34, 59

Conread position: 2-419
Cow position: chr6:51717753-51718178 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 2-419
Cow position: chr6:53672533-53672964 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 33

Conread position: 2-419
Cow position: chr6:54358320-54357909 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 78

Conread position: 2-419
Cow position: chr6:55539073-55538652 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-419
Cow position: chr6:60876494-60876917 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 2-420
Cow position: chr6:39136702-39137114 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 143

Conread position: 2-421
Cow position: chr6:14290312-14289890 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 100

Conread position: 2-421
Cow position: chr6:31912977-31912553 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 148

Conread position: 2-421
Cow position: chr6:33466156-33466581 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 98

Conread position: 2-423
Cow position: chr6:10598202-10598611 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 81

Conread position: 2-423
Cow position: chr6:51673970-51674394 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 103

Conread position: 2-423
Cow position: chr6:53543285-53542857 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 3-220
Cow position: chr6:14264055-14263838 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 32, 20

Conread position: 3-228
Cow position: chr6:52977959-52977740 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 78

Conread position: 3-332
Cow position: chr6:32018916-32018570 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 3-350
Cow position: chr6:17149968-17149629 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 181

Conread position: 3-367
Cow position: chr6:727427-727074 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 69

Conread position: 3-379
Cow position: chr6:15480770-15481137 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 22

Conread position: 3-417
Cow position: chr6:3886306-3885888 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 230

Conread position: 3-419
Cow position: chr6:33922205-33921779 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 308

Conread position: 4-226
Cow position: chr6:529689-529468 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 13

Conread position: 4-287
Cow position: chr6:53935435-53935153 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 29, 69

Conread position: 4-330
Cow position: chr6:38438806-38439142 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 289

Conread position: 4-337
Cow position: chr6:21588184-21588521 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 302

Conread position: 4-356
Cow position: chr6:11639006-11638650 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 91

Conread position: 4-356
Cow position: chr6:28102669-28102314 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 142

Conread position: 4-410
Cow position: chr6:27094386-27093974 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 44

Conread position: 4-417
Cow position: chr6:52249314-52248913 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 283
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 31, 195

Conread position: 4-419
Cow position: chr6:2186582-2186160 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 229

Conread position: 4-419
Cow position: chr6:8205388-8205809 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 228

Conread position: 4-419
Cow position: chr6:20451160-20451580 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 126

Conread position: 4-419
Cow position: chr6:35704314-35703909 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 4-419
Cow position: chr6:47539565-47539996 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 4-419
Cow position: chr6:50571391-50571813 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 229

Conread position: 5-419
Cow position: chr6:9738053-9737642 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 142

Conread position: 5-419
Cow position: chr6:34075065-34075492 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 267

Conread position: 6-203
Cow position: chr6:58605730-58605929 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 72

Conread position: 6-215
Cow position: chr6:50113880-50114091 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 151

Conread position: 6-219
Cow position: chr6:52557447-52557233 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 33

Conread position: 6-228
Cow position: chr6:33508448-33508673 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 66

Conread position: 6-404
Cow position: chr6:27475609-27476023 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 42

Conread position: 6-414
Cow position: chr6:53810788-53811185 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 140

Conread position: 6-419
Cow position: chr6:182343-181920 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 99

Conread position: 6-419
Cow position: chr6:51876963-51877377 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 44

Conread position: 7-292
Cow position: chr6:65941806-65941517 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 160, 28

Conread position: 8-191
Cow position: chr6:51868191-51868377 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 28, 150

Conread position: 8-378
Cow position: chr6:8382145-8382520 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 12

Conread position: 8-409
Cow position: chr6:29484185-29484586 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 76

Conread position: 8-410
Cow position: chr6:1402355-1401951 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 142

Conread position: 8-410
Cow position: chr6:1406943-1406539 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 142

Conread position: 8-410
Cow position: chr6:43087394-43087002 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 8-419
Cow position: chr6:50120723-50120311 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 73

Conread position: 9-419
Cow position: chr6:62487277-62486875 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 269
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 41

Conread position: 12-227
Cow position: chr6:17773194-17773412 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 138

Conread position: 12-383
Cow position: chr6:2367053-2366698 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 132

Conread position: 12-408
Cow position: chr6:10681201-10681594 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 23

Conread position: 12-410
Cow position: chr6:3152426-3152825 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 65

Conread position: 12-410
Cow position: chr6:12971604-12972009 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 12-410
Cow position: chr6:26324992-26324587 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 13-172
Cow position: chr6:12099721-12099873 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 13-338
Cow position: chr6:32286763-32287094 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 20

Conread position: 13-349
Cow position: chr6:58595197-58594855 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 84

Conread position: 13-374
Cow position: chr6:18987345-18987680 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 59

Conread position: 13-398
Cow position: chr6:42988595-42988196 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 13-417
Cow position: chr6:46293236-46292860 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 23

Conread position: 13-417
Cow position: chr6:53461970-53461551 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 219

Conread position: 14-410
Cow position: chr6:20216182-20215783 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 11

Conread position: 14-417
Cow position: chr6:1274637-1274237 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 68

Conread position: 14-419
Cow position: chr6:1096518-1096112 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 57

Conread position: 14-419
Cow position: chr6:6471725-6471297 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 98

Conread position: 14-419
Cow position: chr6:24632037-24631632 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 133

Conread position: 14-419
Cow position: chr6:63041119-63040711 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 121

Conread position: 17-295
Cow position: chr6:10612045-10612322 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 89

Conread position: 17-324
Cow position: chr6:7105319-7105002 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 133

Conread position: 17-417
Cow position: chr6:38988608-38988204 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 18-410
Cow position: chr6:57329492-57329891 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 132

Conread position: 18-417
Cow position: chr6:15783779-15783369 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 18-417
Cow position: chr6:34548248-34548640 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 59

Conread position: 19-228
Cow position: chr6:10252420-10252630 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 14, 20

Conread position: 19-410
Cow position: chr6:63715061-63714663 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 131

Conread position: 32-414
Cow position: chr6:47574019-47574402 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 193

Conread position: 32-419
Cow position: chr6:35825274-35825664 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 32-419
Cow position: chr6:65848141-65847751 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 153

Conread position: 33-410
Cow position: chr6:10650563-10650196 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 5

Conread position: 35-228
Cow position: chr6:7112714-7112511 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 104, 15

Conread position: 35-419
Cow position: chr6:4467855-4468236 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 139

Conread position: 37-391
Cow position: chr6:25408455-25408110 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 34

Conread position: 38-182
Cow position: chr6:11353939-11353796 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 109

Conread position: 38-333
Cow position: chr6:25783179-25782880 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 133, 163

Conread position: 39-394
Cow position: chr6:19441446-19441785 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 52

Conread position: 44-419
Cow position: chr6:19059519-19059895 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 58

Conread position: 46-349
Cow position: chr6:21857129-21856824 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 131

Conread position: 47-227
Cow position: chr6:41233168-41233349 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 113, 64

Conread position: 47-376
Cow position: chr6:48873080-48872750 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 185

Conread position: 47-387
Cow position: chr6:52696828-52697181 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 190

Conread position: 47-409
Cow position: chr6:1245677-1245309 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 113

Conread position: 47-410
Cow position: chr6:28185075-28184708 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-410
Cow position: chr6:34017478-34017111 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-410
Cow position: chr6:42897431-42897803 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-410
Cow position: chr6:45937523-45937892 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-419
Cow position: chr6:37387810-37388188 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 47-419
Cow position: chr6:43790124-43789746 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 185

Conread position: 48-410
Cow position: chr6:62333504-62333137 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 101

Conread position: 48-417
Cow position: chr6:10266882-10266513 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 219

Conread position: 49-230
Cow position: chr6:65049440-65049256 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 121, 0

Conread position: 50-195
Cow position: chr6:60615380-60615524 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 97

Conread position: 50-409
Cow position: chr6:58036529-58036895 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 14

Conread position: 51-410
Cow position: chr6:39897815-39897450 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 98

Conread position: 52-410
Cow position: chr6:39080166-39080530 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 97

Conread position: 52-419
Cow position: chr6:40975417-40975787 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 61

Conread position: 59-172
Cow position: chr6:61632389-61632502 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 59-390
Cow position: chr6:3016368-3016701 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 173

Conread position: 60-254
Cow position: chr6:3574042-3574240 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 60-410
Cow position: chr6:19712988-19712632 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 89

Conread position: 61-172
Cow position: chr6:14064439-14064328 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 61-172
Cow position: chr6:48825971-48825860 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 88

Conread position: 61-417
Cow position: chr6:56842279-56842642 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 304

Conread position: 61-419
Cow position: chr6:2581861-2582236 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 265

Conread position: 64-407
Cow position: chr6:34030521-34030867 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 92

Conread position: 65-418
Cow position: chr6:27858728-27859077 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 78

Conread position: 65-419
Cow position: chr6:28112578-28112216 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 66-256
Cow position: chr6:59603562-59603367 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 169

Conread position: 66-357
Cow position: chr6:12629217-12629509 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 17, 48

Conread position: 66-410
Cow position: chr6:45723864-45723512 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 66-410
Cow position: chr6:54900355-54900702 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 10

Conread position: 66-423
Cow position: chr6:57681268-57680913 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 6, 263

Conread position: 67-410
Cow position: chr6:26829791-26830140 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 82

Conread position: 71-246
Cow position: chr6:50624699-50624878 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 71-384
Cow position: chr6:40031305-40031617 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 25

Conread position: 71-419
Cow position: chr6:55169752-55170092 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 72

Conread position: 71-419
Cow position: chr6:66751041-66751382 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 108, 5

Conread position: 72-313
Cow position: chr6:27942098-27942340 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 115, 111

Conread position: 72-340
Cow position: chr6:28549767-28549496 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 39

Conread position: 73-390
Cow position: chr6:62961172-62961490 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 95, 75

Conread position: 73-419
Cow position: chr6:38873258-38872906 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 73-428
Cow position: chr6:14199315-14199674 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 206

Conread position: 76-417
Cow position: chr6:22225716-22225380 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 162

Conread position: 76-419
Cow position: chr6:1887523-1887177 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 73

Conread position: 76-419
Cow position: chr6:39092890-39093239 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 76-419
Cow position: chr6:47380956-47381292 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 156

Conread position: 76-419
Cow position: chr6:53739560-53739913 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 184

Conread position: 77-356
Cow position: chr6:6601632-6601352 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 71

Conread position: 77-387
Cow position: chr6:45065880-45065574 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 44

Conread position: 77-395
Cow position: chr6:60814154-60813836 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 104, 78

Conread position: 77-398
Cow position: chr6:54376835-54377151 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 153

Conread position: 77-419
Cow position: chr6:539411-539757 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 35

Conread position: 78-410
Cow position: chr6:38917765-38917427 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 20

Conread position: 79-350
Cow position: chr6:68047642-68047371 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 124

Conread position: 81-419
Cow position: chr6:8535516-8535177 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 64

Conread position: 82-316
Cow position: chr6:25822911-25822679 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 30

Conread position: 89-404
Cow position: chr6:31549273-31548971 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 71, 60

Conread position: 90-337
Cow position: chr6:32269962-32269720 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 90, 38

Conread position: 93-408
Cow position: chr6:58915046-58914727 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 114

Conread position: 93-417
Cow position: chr6:47382885-47383205 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 127

Conread position: 94-410
Cow position: chr6:10536688-10536366 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 55

Conread position: 97-419
Cow position: chr6:41409897-41410223 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 37

Conread position: 98-333
Cow position: chr6:39977942-39978179 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 21

Conread position: 99-417
Cow position: chr6:42481177-42481501 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 48

Conread position: 100-400
Cow position: chr6:3982188-3982505 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 73, 0

Conread position: 101-364
Cow position: chr6:54758653-54758921 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 21

Conread position: 102-409
Cow position: chr6:15991643-15991331 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 10

Conread position: 105-347
Cow position: chr6:16274431-16274675 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 127

Conread position: 107-395
Cow position: chr6:32271901-32271612 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 76

Conread position: 107-419
Cow position: chr6:828514-828211 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 67

Conread position: 108-360
Cow position: chr6:49442247-49442506 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 61, 155

Conread position: 111-356
Cow position: chr6:56442169-56441917 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 49, 38

Conread position: 111-356
Cow position: chr6:67213684-67213932 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 155

Conread position: 111-400
Cow position: chr6:7175344-7175057 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 121

Conread position: 114-402
Cow position: chr6:2545503-2545795 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 6

Conread position: 115-293
Cow position: chr6:45856937-45857120 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 34

Conread position: 116-410
Cow position: chr6:28400958-28401258 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 33

Conread position: 116-410
Cow position: chr6:54979216-54978916 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 33

Conread position: 117-419
Cow position: chr6:17456059-17456358 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 42

Conread position: 121-416
Cow position: chr6:16699455-16699752 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 36

Conread position: 121-419
Cow position: chr6:49626614-49626902 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 123-393
Cow position: chr6:50973967-50973706 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 249, 131

Conread position: 124-414
Cow position: chr6:3445492-3445197 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 108

Conread position: 124-418
Cow position: chr6:41192669-41192968 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 125-404
Cow position: chr6:43393223-43393501 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 127-407
Cow position: chr6:18969853-18969581 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 51, 104

Conread position: 129-413
Cow position: chr6:4389039-4389328 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 131-356
Cow position: chr6:39997757-39997527 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 131-419
Cow position: chr6:47977260-47977553 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 133-404
Cow position: chr6:47988255-47988533 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 266

Conread position: 134-419
Cow position: chr6:1817678-1817392 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 44

Conread position: 134-419
Cow position: chr6:6200662-6200951 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 65

Conread position: 158-394
Cow position: chr6:54491582-54491341 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 74

Conread position: 158-414
Cow position: chr6:24126048-24125789 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 158-416
Cow position: chr6:8145672-8145406 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 73

Conread position: 159-407
Cow position: chr6:42761319-42761065 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 94

Conread position: 159-410
Cow position: chr6:444572-444315 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 94

Conread position: 159-410
Cow position: chr6:41495481-41495225 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 72

Conread position: 159-410
Cow position: chr6:41823481-41823224 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 94

Conread position: 159-410
Cow position: chr6:57308580-57308837 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 97

Conread position: 159-419
Cow position: chr6:46390915-46391167 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 16

Conread position: 160-432
Cow position: chr6:63197957-63197685 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 24

Conread position: 161-419
Cow position: chr6:40139927-40139673 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 71

Conread position: 162-349
Cow position: chr6:27150825-27150633 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 165-410
Cow position: chr6:41158959-41158708 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 66

Conread position: 166-421
Cow position: chr6:24988404-24988665 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 174

Conread position: 170-398
Cow position: chr6:65943259-65943492 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 82

Conread position: 170-419
Cow position: chr6:1637589-1637335 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 8, 0

Conread position: 171-419
Cow position: chr6:16737247-16737495 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 59, 7

Conread position: 176-316
Cow position: chr6:4866124-4865981 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 54

Conread position: 176-395
Cow position: chr6:11780109-11779885 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 218

Conread position: 176-396
Cow position: chr6:11168950-11169175 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 0

Conread position: 176-417
Cow position: chr6:13740930-13741168 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 54

Conread position: 176-419
Cow position: chr6:51191009-51191249 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 128, 54

Conread position: 176-429
Cow position: chr6:46570350-46570610 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 54

Conread position: 178-370
Cow position: chr6:52498087-52498282 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 179-419
Cow position: chr6:7254186-7253947 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 53, 108

Conread position: 180-419
Cow position: chr6:3119017-3118767 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 13

Conread position: 182-409
Cow position: chr6:1175545-1175326 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 186-419
Cow position: chr6:46666351-46666579 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 186, 44

Conread position: 187-378
Cow position: chr6:49579492-49579687 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 189-364
Cow position: chr6:65870409-65870590 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 93

Conread position: 189-419
Cow position: chr6:42564935-42565160 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 183, 41

Conread position: 190-419
Cow position: chr6:34405716-34405949 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 40

Conread position: 195-417
Cow position: chr6:32211374-32211152 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 114

Conread position: 200-417
Cow position: chr6:8210332-8210111 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.