Cow genome map

Conread name: Emb1-C0005189_M18

Conread position: 1-384
Cow position: chr21:15911178-15911588 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 17

Conread position: 5-169
Cow position: chr21:31278559-31278729 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 57, 17

Conread position: 5-322
Cow position: chr21:13489420-13489766 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 17, 37

Conread position: 5-424
Cow position: chr21:29484763-29485199 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 163

Conread position: 5-444
Cow position: chr21:17709605-17710058 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 291
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 172

Conread position: 5-457
Cow position: chr21:13585279-13584805 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 384

Conread position: 6-350
Cow position: chr21:35061868-35062235 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 6-361
Cow position: chr21:8206570-8206934 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 98

Conread position: 6-409
Cow position: chr21:23586658-23587088 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 6-436
Cow position: chr21:3817998-3818454 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 6-457
Cow position: chr21:11645189-11644719 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 166

Conread position: 7-391
Cow position: chr21:30607302-30606891 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 16

Conread position: 7-400
Cow position: chr21:25382790-25383230 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 53, 88

Conread position: 9-247
Cow position: chr21:2927418-2927166 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 115, 26

Conread position: 9-388
Cow position: chr21:32237081-32237469 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 16

Conread position: 9-443
Cow position: chr21:6051289-6051735 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 165

Conread position: 10-443
Cow position: chr21:37706623-37706181 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 109

Conread position: 11-360
Cow position: chr21:33947459-33947092 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 125, 75

Conread position: 11-366
Cow position: chr21:1058860-1059244 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 11-392
Cow position: chr21:10118338-10118755 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 11-404
Cow position: chr21:12801959-12801538 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 159

Conread position: 11-457
Cow position: chr21:14464362-14464833 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 233

Conread position: 14-371
Cow position: chr21:40133943-40134330 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 162

Conread position: 14-443
Cow position: chr21:27521537-27521110 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 66

Conread position: 15-443
Cow position: chr21:33510-33964 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 233

Conread position: 17-457
Cow position: chr21:24222747-24222270 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 321
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 117, 71

Conread position: 18-457
Cow position: chr21:7709956-7710408 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 304
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 352

Conread position: 19-230
Cow position: chr21:9710911-9710691 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 208

Conread position: 19-249
Cow position: chr21:27743535-27743785 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 74

Conread position: 21-457
Cow position: chr21:15584608-15584176 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 44

Conread position: 21-457
Cow position: chr21:27569363-27568912 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 150

Conread position: 22-170
Cow position: chr21:28919830-28919670 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 67

Conread position: 22-210
Cow position: chr21:7564526-7564326 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 59

Conread position: 22-361
Cow position: chr21:8126000-8125641 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 41

Conread position: 22-378
Cow position: chr21:38900569-38900954 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 156

Conread position: 22-433
Cow position: chr21:34391174-34390731 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 22-443
Cow position: chr21:42905582-42905164 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 91

Conread position: 22-457
Cow position: chr21:643133-643567 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 32

Conread position: 22-457
Cow position: chr21:12153929-12154372 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 347

Conread position: 23-323
Cow position: chr21:16188001-16187686 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 17

Conread position: 23-381
Cow position: chr21:28512329-28512695 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 197

Conread position: 24-175
Cow position: chr21:24085772-24085614 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 59

Conread position: 24-202
Cow position: chr21:21964827-21965003 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 67

Conread position: 24-212
Cow position: chr21:23984486-23984286 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 24-212
Cow position: chr21:40244232-40244433 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 24-241
Cow position: chr21:17714111-17714347 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 144

Conread position: 24-248
Cow position: chr21:24796240-24796001 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 24-290
Cow position: chr21:8985347-8985636 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 24-298
Cow position: chr21:47802462-47802167 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 152

Conread position: 24-301
Cow position: chr21:6764904-6764605 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 52

Conread position: 24-303
Cow position: chr21:32535774-32536074 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 24-313
Cow position: chr21:23606472-23606772 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 250

Conread position: 24-324
Cow position: chr21:10727079-10727399 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 120

Conread position: 24-329
Cow position: chr21:19766652-19766981 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 24-329
Cow position: chr21:40899134-40899466 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 24-358
Cow position: chr21:45330810-45330446 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 231

Conread position: 24-360
Cow position: chr21:42414304-42413934 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 24-374
Cow position: chr21:45915906-45915547 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 17

Conread position: 24-383
Cow position: chr21:5153415-5153800 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 37, 331

Conread position: 24-384
Cow position: chr21:43357461-43357079 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 38, 54

Conread position: 24-385
Cow position: chr21:24607183-24607571 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 30, 321

Conread position: 24-394
Cow position: chr21:41579549-41579949 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 42

Conread position: 24-401
Cow position: chr21:47764314-47763912 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 146

Conread position: 24-416
Cow position: chr21:16696168-16696594 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 296
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 64

Conread position: 24-425
Cow position: chr21:17511574-17511995 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 291
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 83

Conread position: 24-428
Cow position: chr21:33350540-33350964 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 153

Conread position: 24-428
Cow position: chr21:39401398-39401815 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 37

Conread position: 24-438
Cow position: chr21:9416040-9416476 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 371

Conread position: 24-438
Cow position: chr21:19258624-19259042 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 323

Conread position: 24-441
Cow position: chr21:19196370-19195932 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 299
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 41, 352

Conread position: 24-443
Cow position: chr21:25344676-25345095 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 117

Conread position: 24-455
Cow position: chr21:26648206-26647753 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 62

Conread position: 24-456
Cow position: chr21:41974581-41974121 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 153

Conread position: 24-457
Cow position: chr21:20160482-20160925 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 148

Conread position: 24-457
Cow position: chr21:22718983-22718536 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 313

Conread position: 24-457
Cow position: chr21:30231905-30231449 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 364

Conread position: 24-457
Cow position: chr21:38918013-38918449 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 155

Conread position: 24-457
Cow position: chr21:39403740-39403281 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 319
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 36, 340

Conread position: 24-457
Cow position: chr21:42384303-42384783 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 25-212
Cow position: chr21:33419916-33419728 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 30, 78

Conread position: 25-366
Cow position: chr21:395675-396035 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 117

Conread position: 25-367
Cow position: chr21:31662259-31662636 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 264
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 33, 150

Conread position: 25-393
Cow position: chr21:4399598-4399997 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 371

Conread position: 25-457
Cow position: chr21:24296966-24296518 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 303
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 119

Conread position: 26-241
Cow position: chr21:28881942-28882165 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 111

Conread position: 26-457
Cow position: chr21:4282068-4281636 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 118

Conread position: 27-206
Cow position: chr21:31676299-31676486 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 81

Conread position: 27-234
Cow position: chr21:35897820-35897623 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 27-306
Cow position: chr21:11639821-11640122 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 63

Conread position: 27-361
Cow position: chr21:3236333-3236674 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 80

Conread position: 27-450
Cow position: chr21:30849138-30848710 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 321
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 34, 60

Conread position: 27-457
Cow position: chr21:24797496-24797902 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 117

Conread position: 29-296
Cow position: chr21:5455179-5454901 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 85, 35

Conread position: 29-438
Cow position: chr21:23322278-23321837 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 29-443
Cow position: chr21:28734109-28733680 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 362

Conread position: 29-457
Cow position: chr21:3585553-3585117 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 29-457
Cow position: chr21:28923930-28924371 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 11

Conread position: 29-457
Cow position: chr21:34010587-34010149 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 313
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 31, 89

Conread position: 30-237
Cow position: chr21:45850905-45850686 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 5

Conread position: 30-286
Cow position: chr21:26829437-26829183 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 79, 21

Conread position: 31-248
Cow position: chr21:42145721-42145950 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 153

Conread position: 31-274
Cow position: chr21:912162-911898 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 29, 142

Conread position: 31-299
Cow position: chr21:20925701-20925410 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 31-329
Cow position: chr21:12366192-12366498 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 178

Conread position: 31-360
Cow position: chr21:44565897-44565559 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 28, 80

Conread position: 31-361
Cow position: chr21:14760385-14760729 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 105

Conread position: 31-362
Cow position: chr21:28998101-28997746 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 154

Conread position: 31-413
Cow position: chr21:13897996-13898375 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 93, 110

Conread position: 31-443
Cow position: chr21:44252021-44251609 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 109

Conread position: 31-443
Cow position: chr21:44671558-44672006 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 146

Conread position: 31-456
Cow position: chr21:3361209-3360770 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 144

Conread position: 31-456
Cow position: chr21:6713733-6713278 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 325
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 93

Conread position: 31-457
Cow position: chr21:6833857-6834297 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 305
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 325

Conread position: 31-457
Cow position: chr21:10514612-10515082 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 55

Conread position: 31-457
Cow position: chr21:18568846-18568390 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 332

Conread position: 31-457
Cow position: chr21:27863714-27863272 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 334

Conread position: 31-457
Cow position: chr21:39888939-39888479 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 114

Conread position: 31-457
Cow position: chr21:41620924-41621375 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 316
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 156

Conread position: 31-457
Cow position: chr21:42500838-42501299 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 320
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 22, 15

Conread position: 31-457
Cow position: chr21:45971353-45970932 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 103

Conread position: 32-255
Cow position: chr21:48484635-48484405 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 141, 84

Conread position: 32-356
Cow position: chr21:33997416-33997075 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 130

Conread position: 32-359
Cow position: chr21:24698295-24698642 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 150

Conread position: 32-398
Cow position: chr21:31253341-31253736 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 29, 228

Conread position: 32-457
Cow position: chr21:11114517-11114967 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 290
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 387

Conread position: 33-240
Cow position: chr21:37282116-37282331 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 139

Conread position: 33-347
Cow position: chr21:15610963-15611290 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 110, 12

Conread position: 33-444
Cow position: chr21:19958033-19958448 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 279
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 95, 28

Conread position: 34-398
Cow position: chr21:5426754-5427131 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 209

Conread position: 35-195
Cow position: chr21:9334450-9334284 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 91

Conread position: 35-303
Cow position: chr21:21223099-21223379 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 24, 141

Conread position: 35-325
Cow position: chr21:5636912-5636597 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 141

Conread position: 35-328
Cow position: chr21:38867763-38867462 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 63, 25

Conread position: 35-344
Cow position: chr21:10601559-10601232 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 20, 107

Conread position: 35-353
Cow position: chr21:20044962-20044608 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 110, 345

Conread position: 35-358
Cow position: chr21:33727652-33727298 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 25, 129

Conread position: 35-359
Cow position: chr21:35996981-35997333 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 26, 342

Conread position: 35-361
Cow position: chr21:5898590-5898238 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 20, 137

Conread position: 35-361
Cow position: chr21:17643161-17642821 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 148

Conread position: 35-371
Cow position: chr21:3763928-3763570 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 14

Conread position: 35-409
Cow position: chr21:13738380-13738769 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 43

Conread position: 35-409
Cow position: chr21:18940748-18940365 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 26

Conread position: 35-441
Cow position: chr21:13163702-13164111 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 181

Conread position: 35-445
Cow position: chr21:41597624-41598054 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 229

Conread position: 35-455
Cow position: chr21:10263852-10264280 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 102

Conread position: 35-456
Cow position: chr21:36795411-36795870 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 146

Conread position: 35-457
Cow position: chr21:15445270-15444835 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 254

Conread position: 35-457
Cow position: chr21:18289470-18289924 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 150

Conread position: 35-457
Cow position: chr21:38449643-38449205 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 323

Conread position: 37-319
Cow position: chr21:6102458-6102148 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 23, 146

Conread position: 37-361
Cow position: chr21:28989430-28989777 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 87, 23

Conread position: 37-371
Cow position: chr21:30990457-30990113 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 81

Conread position: 37-443
Cow position: chr21:40589672-40589249 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 308
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 23, 140

Conread position: 38-246
Cow position: chr21:18494778-18495004 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 22, 138

Conread position: 38-295
Cow position: chr21:363467-363722 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 55

Conread position: 38-358
Cow position: chr21:5566801-5567147 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 22, 128

Conread position: 38-378
Cow position: chr21:1591363-1591735 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 136

Conread position: 38-399
Cow position: chr21:45473946-45473555 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 38-401
Cow position: chr21:33263660-33264042 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 71

Conread position: 38-420
Cow position: chr21:33791556-33791159 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 94

Conread position: 38-443
Cow position: chr21:17193948-17193517 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 335

Conread position: 38-457
Cow position: chr21:13365153-13365612 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 108

Conread position: 39-210
Cow position: chr21:4268686-4268867 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 39-457
Cow position: chr21:23672557-23672992 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 51

Conread position: 40-327
Cow position: chr21:3813669-3813365 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 22, 288

Conread position: 42-240
Cow position: chr21:37361654-37361447 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 94

Conread position: 42-353
Cow position: chr21:17174956-17175291 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 301

Conread position: 42-403
Cow position: chr21:37345286-37344893 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 206

Conread position: 43-180
Cow position: chr21:1510890-1511030 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 101

Conread position: 43-323
Cow position: chr21:46143760-46144080 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 43-410
Cow position: chr21:7582092-7581700 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 16, 133

Conread position: 43-457
Cow position: chr21:30592485-30592067 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 306
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 7

Conread position: 45-296
Cow position: chr21:39450349-39450071 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 46-443
Cow position: chr21:41155681-41156102 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 304
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 138

Conread position: 46-456
Cow position: chr21:17183741-17184164 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 36

Conread position: 47-290
Cow position: chr21:1464052-1464314 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 48-361
Cow position: chr21:8235722-8235398 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 12, 111

Conread position: 48-361
Cow position: chr21:15976464-15976796 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 10, 48

Conread position: 49-437
Cow position: chr21:18790733-18790330 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 95

Conread position: 52-457
Cow position: chr21:26244758-26245177 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 70

Conread position: 54-355
Cow position: chr21:41878307-41878627 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 72, 39

Conread position: 54-361
Cow position: chr21:46973295-46972986 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 88

Conread position: 54-380
Cow position: chr21:28810432-28810085 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 30

Conread position: 54-398
Cow position: chr21:21169664-21169297 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 334

Conread position: 54-405
Cow position: chr21:32339906-32339534 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 62

Conread position: 54-428
Cow position: chr21:33562846-33563239 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 29

Conread position: 54-457
Cow position: chr21:23535547-23535960 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 293
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 92, 46

Conread position: 54-457
Cow position: chr21:36756445-36756855 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 286
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 154, 56

Conread position: 55-383
Cow position: chr21:10000912-10001255 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 43

Conread position: 58-457
Cow position: chr21:18065089-18064663 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 70, 337

Conread position: 59-456
Cow position: chr21:10114493-10114087 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 104

Conread position: 61-248
Cow position: chr21:36793730-36793929 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 110, 92

Conread position: 64-443
Cow position: chr21:41590716-41590335 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 78

Conread position: 65-443
Cow position: chr21:13840164-13840559 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 279
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 38

Conread position: 66-456
Cow position: chr21:18800686-18800284 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 275
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 78, 104

Conread position: 68-410
Cow position: chr21:10633796-10633436 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 70, 94

Conread position: 69-410
Cow position: chr21:24642364-24642725 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 71-329
Cow position: chr21:48176674-48176947 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 82

Conread position: 76-399
Cow position: chr21:11359890-11360226 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 106

Conread position: 78-457
Cow position: chr21:10005031-10004636 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 84

Conread position: 84-344
Cow position: chr21:11250726-11251016 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 186

Conread position: 84-457
Cow position: chr21:957528-957916 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 117

Conread position: 85-295
Cow position: chr21:2293854-2294072 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 55

Conread position: 85-313
Cow position: chr21:8438946-8438716 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 85

Conread position: 85-393
Cow position: chr21:12462109-12461773 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 86

Conread position: 86-457
Cow position: chr21:20152810-20153204 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 275

Conread position: 87-294
Cow position: chr21:34736894-34737118 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 87-437
Cow position: chr21:13089604-13089240 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 31

Conread position: 87-443
Cow position: chr21:17875332-17874959 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 274

Conread position: 87-457
Cow position: chr21:7825312-7824943 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 256
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 80

Conread position: 87-457
Cow position: chr21:29978899-29978518 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 37, 90

Conread position: 93-298
Cow position: chr21:5985444-5985226 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 48

Conread position: 93-457
Cow position: chr21:34151450-34151823 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 56, 260

Conread position: 95-344
Cow position: chr21:20192774-20193034 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 69

Conread position: 95-360
Cow position: chr21:12301632-12301348 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 62

Conread position: 96-457
Cow position: chr21:46911-47294 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 73

Conread position: 97-443
Cow position: chr21:27810278-27810623 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 27, 77

Conread position: 100-325
Cow position: chr21:8451771-8452008 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 147

Conread position: 108-401
Cow position: chr21:25629027-25628713 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 242

Conread position: 113-457
Cow position: chr21:23980292-23979932 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 134

Conread position: 115-406
Cow position: chr21:10673023-10673322 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 51

Conread position: 116-457
Cow position: chr21:30835261-30835613 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 76, 24

Conread position: 120-443
Cow position: chr21:10410122-10410454 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 18

Conread position: 120-457
Cow position: chr21:22121425-22121749 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 73, 19

Conread position: 121-457
Cow position: chr21:30250286-30249930 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 82, 18

Conread position: 129-443
Cow position: chr21:7378017-7377692 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 18

Conread position: 130-392
Cow position: chr21:15544305-15544041 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 16

Conread position: 133-457
Cow position: chr21:30256353-30256010 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 9

Conread position: 134-410
Cow position: chr21:7394298-7394589 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 15

Conread position: 137-443
Cow position: chr21:40432367-40432695 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 138-426
Cow position: chr21:30236897-30236620 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 35

Conread position: 138-443
Cow position: chr21:47363820-47363493 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 252

Conread position: 138-457
Cow position: chr21:22210324-22209996 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 71, 46

Conread position: 138-457
Cow position: chr21:28237794-28237452 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 169

Conread position: 138-457
Cow position: chr21:37014483-37014178 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 173

Conread position: 139-457
Cow position: chr21:47714086-47713760 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 13

Conread position: 141-457
Cow position: chr21:36909857-36910198 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 67, 95

Conread position: 142-328
Cow position: chr21:33360110-33359917 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 152

Conread position: 144-403
Cow position: chr21:8527551-8527285 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 29, 75

Conread position: 146-401
Cow position: chr21:1511219-1511489 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 63, 27

Conread position: 146-457
Cow position: chr21:40266049-40266371 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 230

Conread position: 153-457
Cow position: chr21:1764922-1764611 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 270

Conread position: 159-457
Cow position: chr21:11779589-11779291 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 130

Conread position: 160-457
Cow position: chr21:13656687-13656387 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 14

Conread position: 161-375
Cow position: chr21:38268098-38267885 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 65

Conread position: 165-431
Cow position: chr21:977198-976921 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 18

Conread position: 165-457
Cow position: chr21:868979-868672 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 224

Conread position: 167-457
Cow position: chr21:28919576-28919284 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 42, 205

Conread position: 173-402
Cow position: chr21:31159366-31159602 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 14

Conread position: 180-457
Cow position: chr21:44724394-44724129 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 16

Conread position: 182-456
Cow position: chr21:46132547-46132838 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 23

Conread position: 185-436
Cow position: chr21:734562-734827 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 108

Conread position: 186-361
Cow position: chr21:17062909-17063085 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 43

Conread position: 194-361
Cow position: chr21:44861130-44860955 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 108

Conread position: 194-450
Cow position: chr21:10538269-10538008 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 172

Conread position: 202-365
Cow position: chr21:13036909-13036738 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 202-384
Cow position: chr21:21907438-21907243 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 79

Conread position: 202-438
Cow position: chr21:7768425-7768661 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 138

Conread position: 203-457
Cow position: chr21:32393058-32392815 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 32

Conread position: 208-443
Cow position: chr21:13588759-13588993 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 134

Conread position: 208-457
Cow position: chr21:41918249-41917992 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 122

Conread position: 209-443
Cow position: chr21:8431104-8430866 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 140

Conread position: 211-443
Cow position: chr21:8546018-8545789 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 80

Conread position: 211-457
Cow position: chr21:36508241-36508477 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 151

Conread position: 216-361
Cow position: chr21:23460145-23460297 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 225-410
Cow position: chr21:17695647-17695451 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 124

Conread position: 244-443
Cow position: chr21:24266529-24266330 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 96

Conread position: 245-443
Cow position: chr21:2537100-2536905 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 98

Conread position: 246-408
Cow position: chr21:8213238-8213080 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 109

Conread position: 246-428
Cow position: chr21:36682365-36682554 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 128

Conread position: 246-436
Cow position: chr21:20318553-20318743 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 121

Conread position: 246-438
Cow position: chr21:44592169-44591968 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 123

Conread position: 246-452
Cow position: chr21:27677522-27677725 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 94

Conread position: 246-457
Cow position: chr21:41610207-41610426 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 54, 103

Conread position: 250-404
Cow position: chr21:42463644-42463493 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 81, 46

Conread position: 250-452
Cow position: chr21:42562676-42562891 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 22

Conread position: 254-457
Cow position: chr21:28907496-28907302 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 74

Conread position: 263-456
Cow position: chr21:26735466-26735643 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 179, 64

Conread position: 265-457
Cow position: chr21:48482469-48482283 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 68

Conread position: 270-457
Cow position: chr21:29418636-29418818 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 90

Conread position: 280-455
Cow position: chr21:27744098-27744274 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 87

Show alignments to all cow chromosomes.